RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 ARHGEF7Q14155 803 aa12.64□□□□□ -0.39
SYNGAP1-207ENST00000628646 RNF168Q8IYW5 571 aaPredicted RBP12.64□□□□□ -0.39
SYNGAP1-207ENST00000628646 ZNF366Q8N895 744 aa12.64□□□□□ -0.39
SYNGAP1-207ENST00000628646 GBP7Q8N8V2 638 aaPredicted RBP12.64□□□□□ -0.39
SYNGAP1-207ENST00000628646 HMCESQ96FZ2 354 aa12.64□□□□□ -0.39
SYNGAP1-207ENST00000628646 KLF16Q9BXK1 252 aaPredicted RBP12.64□□□□□ -0.39
SYNGAP1-207ENST00000628646 SUDS3Q9H7L9 328 aaPredicted RBP12.64□□□□□ -0.39
SYNGAP1-207ENST00000628646 FAM72CH0Y354 149 aa12.64□□□□□ -0.39
SYNGAP1-207ENST00000628646 TBX10O75333 385 aa12.64□□□□□ -0.39
SYNGAP1-207ENST00000628646 BANF1O75531 89 aa12.64□□□□□ -0.39
SYNGAP1-207ENST00000628646 ARSAP15289 507 aa12.64□□□□□ -0.39
SYNGAP1-207ENST00000628646 TIE1P35590 1138 aa12.64□□□□□ -0.39
SYNGAP1-207ENST00000628646 RGS19P49795 217 aa12.64□□□□□ -0.39
SYNGAP1-207ENST00000628646 YBEYP58557 167 aaPredicted RBP12.64□□□□□ -0.39
SYNGAP1-207ENST00000628646 ALFQ53S48 1182 aa12.64□□□□□ -0.39
SYNGAP1-207ENST00000628646 FAM72AQ5TYM5 149 aa12.64□□□□□ -0.39
SYNGAP1-207ENST00000628646 FAM72DQ6L9T8 149 aa12.64□□□□□ -0.39
SYNGAP1-207ENST00000628646 KLHDC10Q6PID8 442 aa12.64□□□□□ -0.39
SYNGAP1-207ENST00000628646 FAM72BQ86X60 149 aa12.64□□□□□ -0.39
SYNGAP1-207ENST00000628646 ZNF276Q8N554 614 aa12.64□□□□□ -0.39
SYNGAP1-207ENST00000628646 CPT1BQ92523 772 aa12.64□□□□□ -0.39
SYNGAP1-207ENST00000628646 ELAC2Q9BQ52 826 aaKnown RBP12.64□□□□□ -0.39
SYNGAP1-207ENST00000628646 PHF7Q9BWX1 381 aaPredicted RBP12.64□□□□□ -0.39
SYNGAP1-207ENST00000628646 RCOR3Q9P2K3 495 aaPredicted RBP12.64□□□□□ -0.39
SYNGAP1-207ENST00000628646 TCRBV7S3A2A0A539 114 aa12.64□□□□□ -0.39
SYNGAP1-207ENST00000628646 PABPN1LA6NDY0 278 aaKnown RBP12.64□□□□□ -0.39
SYNGAP1-207ENST00000628646 E7ESA3 106 aa12.64□□□□□ -0.39
SYNGAP1-207ENST00000628646 MAP3K13O43283 966 aa12.64□□□□□ -0.39
SYNGAP1-207ENST00000628646 GABBR2O75899 941 aa12.64□□□□□ -0.39
SYNGAP1-207ENST00000628646 KRT38O76015 456 aa12.64□□□□□ -0.39
SYNGAP1-207ENST00000628646 SLC7A9P82251 487 aa12.64□□□□□ -0.39
SYNGAP1-207ENST00000628646 SULT2A1Q06520 285 aa12.64□□□□□ -0.39
SYNGAP1-207ENST00000628646 PIK3R6Q5UE93 754 aa12.64□□□□□ -0.39
SYNGAP1-207ENST00000628646 PIAS3Q9Y6X2 628 aa12.64□□□□□ -0.39
SYNGAP1-207ENST00000628646 ANXA9O76027 345 aa12.63□□□□□ -0.39
SYNGAP1-207ENST00000628646 ASMTLO95671 621 aa12.63□□□□□ -0.39
SYNGAP1-207ENST00000628646 CCNB1P14635 433 aa12.63□□□□□ -0.39
SYNGAP1-207ENST00000628646 MAPKAPK2P49137 400 aa12.63□□□□□ -0.39
SYNGAP1-207ENST00000628646 CCDC15Q0P6D6 951 aa12.63□□□□□ -0.39
SYNGAP1-207ENST00000628646 RASA2Q15283 850 aa12.63□□□□□ -0.39
SYNGAP1-207ENST00000628646 FNBP1LQ5T0N5 605 aa12.63□□□□□ -0.39
SYNGAP1-207ENST00000628646 DSG4Q86SJ6 1040 aa12.63□□□□□ -0.39
SYNGAP1-207ENST00000628646 VSIG1Q86XK7 387 aa12.63□□□□□ -0.39
SYNGAP1-207ENST00000628646 AGGF1Q8N302 714 aaeCLIP12.63□□□□□ -0.39
SYNGAP1-207ENST00000628646 PLD5Q8N7P1 536 aa12.63□□□□□ -0.39
SYNGAP1-207ENST00000628646 CYB5D2Q8WUJ1 264 aa12.63□□□□□ -0.39
SYNGAP1-207ENST00000628646 IL21Q9HBE4 155 aa12.63□□□□□ -0.39
SYNGAP1-207ENST00000628646 MLXIPLQ9NP71 852 aa12.63□□□□□ -0.39
SYNGAP1-207ENST00000628646 FGFR1OP2Q9NVK5 253 aa12.63□□□□□ -0.39
SYNGAP1-207ENST00000628646 BPTFQ12830 3046 aa12.63□□□□□ -0.39
SYNGAP1-207ENST00000628646 TCP11X1B4DZS4 312 aa12.63□□□□□ -0.39
SYNGAP1-207ENST00000628646 TAC1P20366 129 aa12.63□□□□□ -0.39
SYNGAP1-207ENST00000628646 RASSF2P50749 326 aa12.63□□□□□ -0.39
SYNGAP1-207ENST00000628646 SNRPD1P62314 119 aaKnown RBP12.63□□□□□ -0.39
SYNGAP1-207ENST00000628646 PARP15Q460N3 678 aa12.63□□□□□ -0.39
SYNGAP1-207ENST00000628646 PARM1Q6UWI2 310 aa12.63□□□□□ -0.39
SYNGAP1-207ENST00000628646 BEND5Q7L4P6 421 aa12.63□□□□□ -0.39
SYNGAP1-207ENST00000628646 ARCQ7LC44 396 aa12.63□□□□□ -0.39
SYNGAP1-207ENST00000628646 SCML4Q8N228 414 aa12.63□□□□□ -0.39
SYNGAP1-207ENST00000628646 KHSRPQ92945 711 aaKnown RBP eCLIP12.63□□□□□ -0.39
SYNGAP1-207ENST00000628646 IGSF8Q969P0 613 aa12.63□□□□□ -0.39
SYNGAP1-207ENST00000628646 MAGEH1Q9H213 219 aa12.63□□□□□ -0.39
SYNGAP1-207ENST00000628646 PSMC3IPQ9P2W1 217 aaPredicted RBP12.63□□□□□ -0.39
SYNGAP1-207ENST00000628646 SLC24A2Q9UI40 661 aa12.63□□□□□ -0.39
SYNGAP1-207ENST00000628646 C1QAP02745 245 aa12.63□□□□□ -0.39
SYNGAP1-207ENST00000628646 FYNP06241 537 aa12.63□□□□□ -0.39
SYNGAP1-207ENST00000628646 MBLAC2Q68D91 279 aa12.63□□□□□ -0.39
SYNGAP1-207ENST00000628646 OR6P1Q8NGX9 317 aa12.63□□□□□ -0.39
SYNGAP1-207ENST00000628646 ZNF707Q96C28 371 aaPredicted RBP12.63□□□□□ -0.39
SYNGAP1-207ENST00000628646 CFAP36Q96G28 342 aa12.63□□□□□ -0.39
SYNGAP1-207ENST00000628646 SHDQ96IW2 340 aa12.63□□□□□ -0.39
SYNGAP1-207ENST00000628646 GPR63Q9BZJ6 419 aa12.63□□□□□ -0.39
SYNGAP1-207ENST00000628646 TNKS2Q9H2K2 1166 aa12.63□□□□□ -0.39
SYNGAP1-207ENST00000628646 ZDHHC4Q9NPG8 344 aa12.63□□□□□ -0.39
SYNGAP1-207ENST00000628646 TYROBPO43914 113 aa12.62□□□□□ -0.39
SYNGAP1-207ENST00000628646 SNAP91O60641 907 aa12.62□□□□□ -0.39
SYNGAP1-207ENST00000628646 PCDH8O95206 1070 aa12.62□□□□□ -0.39
SYNGAP1-207ENST00000628646 PFKLP17858 780 aa12.62□□□□□ -0.39
SYNGAP1-207ENST00000628646 SLC18A1P54219 525 aa12.62□□□□□ -0.39
SYNGAP1-207ENST00000628646 NRLP54845 237 aa12.62□□□□□ -0.39
SYNGAP1-207ENST00000628646 SLC45A4Q5BKX6 768 aa12.62□□□□□ -0.39
SYNGAP1-207ENST00000628646 SNX19Q92543 992 aa12.62□□□□□ -0.39
SYNGAP1-207ENST00000628646 PHACTR1Q9C0D0 580 aa12.62□□□□□ -0.39
SYNGAP1-207ENST00000628646 SLC39A8Q9C0K1 460 aa12.62□□□□□ -0.39
SYNGAP1-207ENST00000628646 POLR1EQ9GZS1 481 aaKnown RBP12.62□□□□□ -0.39
SYNGAP1-207ENST00000628646 BRD8Q9H0E9 1235 aa12.62□□□□□ -0.39
SYNGAP1-207ENST00000628646 ECT2Q9H8V3 914 aa12.62□□□□□ -0.39
SYNGAP1-207ENST00000628646 HTTP42858 3142 aa12.62□□□□□ -0.39
SYNGAP1-207ENST00000628646 VNN2O95498 520 aa12.62□□□□□ -0.39
SYNGAP1-207ENST00000628646 CD72P21854 359 aa12.62□□□□□ -0.39
SYNGAP1-207ENST00000628646 IL4RP24394 825 aa12.62□□□□□ -0.39
SYNGAP1-207ENST00000628646 HTR7P34969 479 aa12.62□□□□□ -0.39
SYNGAP1-207ENST00000628646 BCL2L1Q07817 233 aa12.62□□□□□ -0.39
SYNGAP1-207ENST00000628646 TMCO4Q5TGY1 634 aa12.62□□□□□ -0.39
SYNGAP1-207ENST00000628646 BLOC1S5Q8TDH9 187 aa12.62□□□□□ -0.39
SYNGAP1-207ENST00000628646 SEMA3CQ99985 751 aa12.62□□□□□ -0.39
SYNGAP1-207ENST00000628646 ETNK2Q9NVF9 386 aa12.62□□□□□ -0.39
SYNGAP1-207ENST00000628646 RABGEF1Q9UJ41 708 aa12.62□□□□□ -0.39
SYNGAP1-207ENST00000628646 PTPRZ1P23471 2315 aaPredicted RBP12.62□□□□□ -0.39
SYNGAP1-207ENST00000628646 A8MX80 341 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms