RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 H3BRJ5 948 aa22.71■■□□□ 1.23
SF1-220ENST00000626028 PLK4O00444 970 aa22.71■■□□□ 1.23
SF1-220ENST00000626028 TMCC1O94876 653 aa22.71■■□□□ 1.23
SF1-220ENST00000626028 H2AFZP0C0S5 128 aa22.71■■□□□ 1.23
SF1-220ENST00000626028 ADRB3P13945 408 aa22.71■■□□□ 1.23
SF1-220ENST00000626028 ERCC2P18074 760 aa22.71■■□□□ 1.23
SF1-220ENST00000626028 ARL4AP40617 200 aa22.71■■□□□ 1.23
SF1-220ENST00000626028 PPP2CBP62714 309 aa22.71■■□□□ 1.23
SF1-220ENST00000626028 PPP2CAP67775 309 aa22.71■■□□□ 1.23
SF1-220ENST00000626028 DPYSQ14117 519 aa22.71■■□□□ 1.23
SF1-220ENST00000626028 SUZ12Q15022 739 aaKnown RBP22.71■■□□□ 1.23
SF1-220ENST00000626028 ZNF423Q2M1K9 1284 aa22.71■■□□□ 1.23
SF1-220ENST00000626028 MYLK3Q32MK0 819 aa22.71■■□□□ 1.23
SF1-220ENST00000626028 POM121L1PQ3SYA9 428 aa22.71■■□□□ 1.23
SF1-220ENST00000626028 ZNF805Q5CZA5 627 aa22.71■■□□□ 1.23
SF1-220ENST00000626028 FBXL19Q6PCT2 694 aa22.71■■□□□ 1.23
SF1-220ENST00000626028 H2AFVQ71UI9 128 aa22.71■■□□□ 1.23
SF1-220ENST00000626028 CNGA4Q8IV77 575 aa22.71■■□□□ 1.23
SF1-220ENST00000626028 OR2I1PQ8NGU4 316 aa22.71■■□□□ 1.23
SF1-220ENST00000626028 FAM174AQ8TBP5 190 aa22.71■■□□□ 1.23
SF1-220ENST00000626028 CTNNBL1Q8WYA6 563 aaPredicted RBP22.71■■□□□ 1.23
SF1-220ENST00000626028 ARHGEF26Q96DR7 871 aa22.71■■□□□ 1.23
SF1-220ENST00000626028 SLC6A18Q96N87 628 aa22.71■■□□□ 1.23
SF1-220ENST00000626028 KCTD15Q96SI1 283 aaPredicted RBP22.71■■□□□ 1.23
SF1-220ENST00000626028 TM6SF2Q9BZW4 377 aa22.71■■□□□ 1.23
SF1-220ENST00000626028 DEF6Q9H4E7 631 aa22.71■■□□□ 1.23
SF1-220ENST00000626028 AASDHPPTQ9NRN7 309 aa22.71■■□□□ 1.23
SF1-220ENST00000626028 CWC15Q9P013 229 aaKnown RBP22.71■■□□□ 1.23
SF1-220ENST00000626028 SNX11Q9Y5W9 270 aa22.71■■□□□ 1.23
SF1-220ENST00000626028 PCDHGA12O60330 932 aa22.7■■□□□ 1.22
SF1-220ENST00000626028 PRAMEF11O60813 436 aa22.7■■□□□ 1.22
SF1-220ENST00000626028 MFAP3LO75121 409 aa22.7■■□□□ 1.22
SF1-220ENST00000626028 IGSF6O95976 241 aa22.7■■□□□ 1.22
SF1-220ENST00000626028 KIAA1161Q6NSJ0 714 aa22.7■■□□□ 1.22
SF1-220ENST00000626028 HORMAD1Q86X24 394 aa22.7■■□□□ 1.22
SF1-220ENST00000626028 DEFB124Q8NES8 71 aa22.7■■□□□ 1.22
SF1-220ENST00000626028 CPEB1Q9BZB8 566 aaKnown RBP22.7■■□□□ 1.22
SF1-220ENST00000626028 KLC2Q9H0B6 622 aa22.7■■□□□ 1.22
SF1-220ENST00000626028 ZDHHC6Q9H6R6 413 aa22.7■■□□□ 1.22
SF1-220ENST00000626028 ERVMER34-1Q9H9K5 563 aa22.7■■□□□ 1.22
SF1-220ENST00000626028 PDFQ9HBH1 243 aa22.7■■□□□ 1.22
SF1-220ENST00000626028 RCOR3Q9P2K3 495 aaPredicted RBP22.7■■□□□ 1.22
SF1-220ENST00000626028 UBA2Q9UBT2 640 aaPredicted RBP22.7■■□□□ 1.22
SF1-220ENST00000626028 ACTL7AQ9Y615 435 aa22.7■■□□□ 1.22
SF1-220ENST00000626028 COL5A1P20908 1838 aaPredicted RBP22.69■■□□□ 1.22
SF1-220ENST00000626028 A0A1W2PR77 199 aa22.69■■□□□ 1.22
SF1-220ENST00000626028 YKT6O15498 198 aa22.69■■□□□ 1.22
SF1-220ENST00000626028 FLRT2O43155 660 aa22.69■■□□□ 1.22
SF1-220ENST00000626028 KCNA4P22459 653 aa22.69■■□□□ 1.22
SF1-220ENST00000626028 IL1R2P27930 398 aa22.69■■□□□ 1.22
SF1-220ENST00000626028 SUOXP51687 545 aa22.69■■□□□ 1.22
SF1-220ENST00000626028 RHOAP61586 193 aa22.69■■□□□ 1.22
SF1-220ENST00000626028 SHC2P98077 582 aa22.69■■□□□ 1.22
SF1-220ENST00000626028 RFTN1Q14699 578 aaPredicted RBP22.69■■□□□ 1.22
SF1-220ENST00000626028 HADHQ16836 314 aaKnown RBP22.69■■□□□ 1.22
SF1-220ENST00000626028 TMCO4Q5TGY1 634 aa22.69■■□□□ 1.22
SF1-220ENST00000626028 POLNQ7Z5Q5 900 aa22.69■■□□□ 1.22
SF1-220ENST00000626028 NAXDQ8IW45 347 aa22.69■■□□□ 1.22
SF1-220ENST00000626028 RYBPQ8N488 228 aaPredicted RBP22.69■■□□□ 1.22
SF1-220ENST00000626028 OXR1Q8N573 874 aa22.69■■□□□ 1.22
SF1-220ENST00000626028 ZNF564Q8TBZ8 553 aaPredicted RBP22.69■■□□□ 1.22
SF1-220ENST00000626028 HCAR2Q8TDS4 363 aa22.69■■□□□ 1.22
SF1-220ENST00000626028 DKK3Q9UBP4 350 aa22.69■■□□□ 1.22
SF1-220ENST00000626028 FNDC3AQ9Y2H6 1198 aaKnown RBP22.69■■□□□ 1.22
SF1-220ENST00000626028 KRIT1O00522 736 aa22.68■■□□□ 1.22
SF1-220ENST00000626028 TSPAN6O43657 245 aa22.68■■□□□ 1.22
SF1-220ENST00000626028 AKR1B10O60218 316 aa22.68■■□□□ 1.22
SF1-220ENST00000626028 PMLP29590 882 aa22.68■■□□□ 1.22
SF1-220ENST00000626028 CCT8P50990 548 aa22.68■■□□□ 1.22
SF1-220ENST00000626028 RPS21P63220 83 aaKnown RBP22.68■■□□□ 1.22
SF1-220ENST00000626028 SLC25A11Q02978 314 aaKnown RBP22.68■■□□□ 1.22
SF1-220ENST00000626028 STAT4Q14765 748 aa22.68■■□□□ 1.22
SF1-220ENST00000626028 FEM1CQ96JP0 617 aa22.68■■□□□ 1.22
SF1-220ENST00000626028 CCDC42Q96M95 316 aa22.68■■□□□ 1.22
SF1-220ENST00000626028 SLC39A8Q9C0K1 460 aa22.68■■□□□ 1.22
SF1-220ENST00000626028 GDF3Q9NR23 364 aa22.68■■□□□ 1.22
SF1-220ENST00000626028 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.68■■□□□ 1.22
SF1-220ENST00000626028 FADS3Q9Y5Q0 445 aa22.68■■□□□ 1.22
SF1-220ENST00000626028 LRRK1Q38SD2 2015 aa22.67■■□□□ 1.22
SF1-220ENST00000626028 A0A1W2PQU0 124 aa22.67■■□□□ 1.22
SF1-220ENST00000626028 TLR4O00206 839 aa22.67■■□□□ 1.22
SF1-220ENST00000626028 GIPC1O14908 333 aa22.67■■□□□ 1.22
SF1-220ENST00000626028 RARAP10276 462 aa22.67■■□□□ 1.22
SF1-220ENST00000626028 CSNK1DP48730 415 aa22.67■■□□□ 1.22
SF1-220ENST00000626028 PAPOLAP51003 745 aaKnown RBP22.67■■□□□ 1.22
SF1-220ENST00000626028 IL10RBQ08334 325 aa22.67■■□□□ 1.22
SF1-220ENST00000626028 TBX2Q13207 712 aaPredicted RBP22.67■■□□□ 1.22
SF1-220ENST00000626028 ZNF284Q2VY69 593 aa22.67■■□□□ 1.22
SF1-220ENST00000626028 INAVAQ3KP66 663 aa22.67■■□□□ 1.22
SF1-220ENST00000626028 TMEM259Q4ZIN3 620 aa22.67■■□□□ 1.22
SF1-220ENST00000626028 GDPD4Q6W3E5 623 aa22.67■■□□□ 1.22
SF1-220ENST00000626028 GLRX5Q86SX6 157 aa22.67■■□□□ 1.22
SF1-220ENST00000626028 ARHGAP12Q8IWW6 846 aa22.67■■□□□ 1.22
SF1-220ENST00000626028 FAM71BQ8TC56 605 aa22.67■■□□□ 1.22
SF1-220ENST00000626028 ZNF599Q96NL3 588 aa22.67■■□□□ 1.22
SF1-220ENST00000626028 IL21RQ9HBE5 538 aa22.67■■□□□ 1.22
SF1-220ENST00000626028 CTTNBP2NLQ9P2B4 639 aa22.67■■□□□ 1.22
SF1-220ENST00000626028 C16orf96A6NNT2 1141 aa22.66■■□□□ 1.22
SF1-220ENST00000626028 AKR1B15C9JRZ8 316 aaPredicted RBP22.66■■□□□ 1.22
SF1-220ENST00000626028 RNF103O00237 685 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms