RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 MMAAQ8IVH4 418 aaKnown RBP20.36■□□□□ 0.85
R3HCC1-210ENST00000625275 CALN1Q9BXU9 219 aa20.36■□□□□ 0.85
R3HCC1-210ENST00000625275 ZYG11BQ9C0D3 744 aa20.36■□□□□ 0.85
R3HCC1-210ENST00000625275 TM9SF3Q9HD45 589 aa20.36■□□□□ 0.85
R3HCC1-210ENST00000625275 PCDHB9Q9Y5E1 797 aa20.36■□□□□ 0.85
R3HCC1-210ENST00000625275 H3BRJ5 948 aa20.35■□□□□ 0.85
R3HCC1-210ENST00000625275 TRIM16O95361 564 aa20.35■□□□□ 0.85
R3HCC1-210ENST00000625275 IL4RP24394 825 aa20.35■□□□□ 0.85
R3HCC1-210ENST00000625275 MZF1P28698 734 aaPredicted RBP20.35■□□□□ 0.85
R3HCC1-210ENST00000625275 HTR7P34969 479 aa20.35■□□□□ 0.85
R3HCC1-210ENST00000625275 NNMTP40261 264 aa20.35■□□□□ 0.85
R3HCC1-210ENST00000625275 ARL4AP40617 200 aa20.35■□□□□ 0.85
R3HCC1-210ENST00000625275 ZNF135P52742 658 aaPredicted RBP20.35■□□□□ 0.85
R3HCC1-210ENST00000625275 PLK1P53350 603 aa20.35■□□□□ 0.85
R3HCC1-210ENST00000625275 MMRN1Q13201 1228 aa20.35■□□□□ 0.85
R3HCC1-210ENST00000625275 TRIP6Q15654 476 aaKnown RBP20.35■□□□□ 0.85
R3HCC1-210ENST00000625275 ZNF423Q2M1K9 1284 aa20.35■□□□□ 0.85
R3HCC1-210ENST00000625275 KIAA0895LQ68EN5 471 aa20.35■□□□□ 0.85
R3HCC1-210ENST00000625275 UBL4BQ8N7F7 174 aa20.35■□□□□ 0.85
R3HCC1-210ENST00000625275 RNF25Q96BH1 459 aaPredicted RBP20.35■□□□□ 0.85
R3HCC1-210ENST00000625275 CSPG4P5Q96PW8 444 aa20.35■□□□□ 0.85
R3HCC1-210ENST00000625275 TMEM121BQ9BXQ6 578 aaPredicted RBP20.35■□□□□ 0.85
R3HCC1-210ENST00000625275 TLR10Q9BXR5 811 aa20.35■□□□□ 0.85
R3HCC1-210ENST00000625275 TM7SF3Q9NS93 570 aa20.35■□□□□ 0.85
R3HCC1-210ENST00000625275 RCOR3Q9P2K3 495 aaPredicted RBP20.35■□□□□ 0.85
R3HCC1-210ENST00000625275 FZD4Q9ULV1 537 aa20.35■□□□□ 0.85
R3HCC1-210ENST00000625275 NEUROG3Q9Y4Z2 214 aa20.35■□□□□ 0.85
R3HCC1-210ENST00000625275 CHD6Q8TD26 2715 aa20.35■□□□□ 0.85
R3HCC1-210ENST00000625275 A0A1W2PP55 124 aa20.34■□□□□ 0.85
R3HCC1-210ENST00000625275 IGHV4-34P06331 123 aa20.34■□□□□ 0.85
R3HCC1-210ENST00000625275 PSMD8P48556 350 aa20.34■□□□□ 0.85
R3HCC1-210ENST00000625275 HCAR3P49019 387 aa20.34■□□□□ 0.85
R3HCC1-210ENST00000625275 NUMBP49757 651 aa20.34■□□□□ 0.85
R3HCC1-210ENST00000625275 RWDD2BP57060 319 aa20.34■□□□□ 0.85
R3HCC1-210ENST00000625275 GNG11P61952 73 aa20.34■□□□□ 0.85
R3HCC1-210ENST00000625275 DPYSQ14117 519 aa20.34■□□□□ 0.85
R3HCC1-210ENST00000625275 ELAVL3Q14576 367 aaKnown RBP20.34■□□□□ 0.85
R3HCC1-210ENST00000625275 TFAP2DQ7Z6R9 452 aa20.34■□□□□ 0.85
R3HCC1-210ENST00000625275 MAP7D3Q8IWC1 876 aa20.34■□□□□ 0.85
R3HCC1-210ENST00000625275 STK40Q8N2I9 435 aa20.34■□□□□ 0.85
R3HCC1-210ENST00000625275 EXD1Q8NHP7 514 aa20.34■□□□□ 0.85
R3HCC1-210ENST00000625275 UBE2Q2Q8WVN8 375 aa20.34■□□□□ 0.85
R3HCC1-210ENST00000625275 GATA6Q92908 595 aa20.34■□□□□ 0.85
R3HCC1-210ENST00000625275 PTPRN2Q92932 1015 aa20.34■□□□□ 0.85
R3HCC1-210ENST00000625275 FAM129BQ96TA1 746 aa20.34■□□□□ 0.85
R3HCC1-210ENST00000625275 OMDQ99983 421 aa20.34■□□□□ 0.85
R3HCC1-210ENST00000625275 ZNF670Q9BS34 389 aa20.34■□□□□ 0.85
R3HCC1-210ENST00000625275 ZNF212Q9UDV6 495 aa20.34■□□□□ 0.85
R3HCC1-210ENST00000625275 JRKLQ9Y4A0 524 aa20.34■□□□□ 0.85
R3HCC1-210ENST00000625275 FAM208BQ5VWN6 2430 aa20.33■□□□□ 0.85
R3HCC1-210ENST00000625275 FAM47DPA6NHR8 397 aa20.33■□□□□ 0.85
R3HCC1-210ENST00000625275 ENC1O14682 589 aa20.33■□□□□ 0.85
R3HCC1-210ENST00000625275 RNASEH2AO75792 299 aaKnown RBP20.33■□□□□ 0.85
R3HCC1-210ENST00000625275 ZRANB2O95218 330 aaKnown RBP eCLIP20.33■□□□□ 0.85
R3HCC1-210ENST00000625275 ADH1BP00325 375 aa20.33■□□□□ 0.85
R3HCC1-210ENST00000625275 RHOQP17081 205 aa20.33■□□□□ 0.85
R3HCC1-210ENST00000625275 MSNP26038 577 aaKnown RBP20.33■□□□□ 0.85
R3HCC1-210ENST00000625275 SLC8A1P32418 973 aa20.33■□□□□ 0.85
R3HCC1-210ENST00000625275 CDH4P55283 916 aa20.33■□□□□ 0.85
R3HCC1-210ENST00000625275 RPS6KA1Q15418 735 aa20.33■□□□□ 0.85
R3HCC1-210ENST00000625275 KIF19Q2TAC6 998 aa20.33■□□□□ 0.85
R3HCC1-210ENST00000625275 ODF2Q5BJF6 829 aa20.33■□□□□ 0.85
R3HCC1-210ENST00000625275 NCEH1Q6PIU2 408 aa20.33■□□□□ 0.85
R3HCC1-210ENST00000625275 MFSD7Q6UXD7 560 aa20.33■□□□□ 0.85
R3HCC1-210ENST00000625275 NLRP14Q86W24 1093 aa20.33■□□□□ 0.85
R3HCC1-210ENST00000625275 FAF2Q96CS3 445 aa20.33■□□□□ 0.85
R3HCC1-210ENST00000625275 WDR24Q96S15 920 aa20.33■□□□□ 0.85
R3HCC1-210ENST00000625275 ORAI3Q9BRQ5 295 aa20.33■□□□□ 0.85
R3HCC1-210ENST00000625275 NEUROG2Q9H2A3 272 aa20.33■□□□□ 0.85
R3HCC1-210ENST00000625275 PCOLCE2Q9UKZ9 415 aa20.33■□□□□ 0.85
R3HCC1-210ENST00000625275 ANKRD6Q9Y2G4 727 aa20.33■□□□□ 0.85
R3HCC1-210ENST00000625275 PCDHGB2Q9Y5G2 931 aa20.33■□□□□ 0.85
R3HCC1-210ENST00000625275 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.32■□□□□ 0.84
R3HCC1-210ENST00000625275 LRRC72A6NJI9 287 aa20.32■□□□□ 0.84
R3HCC1-210ENST00000625275 FGF10O15520 208 aaPredicted RBP20.32■□□□□ 0.84
R3HCC1-210ENST00000625275 CBFA2T3O75081 653 aa20.32■□□□□ 0.84
R3HCC1-210ENST00000625275 CLDN11O75508 207 aa20.32■□□□□ 0.84
R3HCC1-210ENST00000625275 C5AR1P21730 350 aa20.32■□□□□ 0.84
R3HCC1-210ENST00000625275 CDKN2BP42772 138 aa20.32■□□□□ 0.84
R3HCC1-210ENST00000625275 ZNF177Q13360 481 aaPredicted RBP20.32■□□□□ 0.84
R3HCC1-210ENST00000625275 ANKRD20A8PQ5CZ79 823 aa20.32■□□□□ 0.84
R3HCC1-210ENST00000625275 LAYNQ6UX15 382 aa20.32■□□□□ 0.84
R3HCC1-210ENST00000625275 VSIG1Q86XK7 387 aa20.32■□□□□ 0.84
R3HCC1-210ENST00000625275 RCOR2Q8IZ40 523 aa20.32■□□□□ 0.84
R3HCC1-210ENST00000625275 AADATQ8N5Z0 425 aa20.32■□□□□ 0.84
R3HCC1-210ENST00000625275 SETD7Q8WTS6 366 aaKnown RBP20.32■□□□□ 0.84
R3HCC1-210ENST00000625275 ALG14Q96F25 216 aa20.32■□□□□ 0.84
R3HCC1-210ENST00000625275 RBM41Q96IZ5 413 aaKnown RBP20.32■□□□□ 0.84
R3HCC1-210ENST00000625275 CATSPERBQ9H7T0 1116 aa20.32■□□□□ 0.84
R3HCC1-210ENST00000625275 NDFIP2Q9NV92 336 aa20.32■□□□□ 0.84
R3HCC1-210ENST00000625275 TMEM248Q9NWD8 314 aa20.32■□□□□ 0.84
R3HCC1-210ENST00000625275 SLC25A13Q9UJS0 675 aa20.32■□□□□ 0.84
R3HCC1-210ENST00000625275 KLK13Q9UKR3 277 aa20.32■□□□□ 0.84
R3HCC1-210ENST00000625275 SNX11Q9Y5W9 270 aa20.32■□□□□ 0.84
R3HCC1-210ENST00000625275 COL5A1P20908 1838 aaPredicted RBP20.32■□□□□ 0.84
R3HCC1-210ENST00000625275 ARID1BQ8NFD5 2236 aaPredicted RBP20.31■□□□□ 0.84
R3HCC1-210ENST00000625275 ZNF487B1APH4 448 aa20.31■□□□□ 0.84
R3HCC1-210ENST00000625275 DAPK3O43293 454 aa20.31■□□□□ 0.84
R3HCC1-210ENST00000625275 FTH1P19P0C7X4 201 aa20.31■□□□□ 0.84
R3HCC1-210ENST00000625275 PYGMP11217 842 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 167 ms