RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 NADSYN1Q6IA69 706 aa19.97■□□□□ 0.79
PCDHB11-202ENST00000624887 KIAA0930Q6ICG6 404 aaPredicted RBP19.97■□□□□ 0.79
PCDHB11-202ENST00000624887 SLC8B1Q6J4K2 584 aa19.97■□□□□ 0.79
PCDHB11-202ENST00000624887 KDELC2Q7Z4H8 507 aa19.97■□□□□ 0.79
PCDHB11-202ENST00000624887 WDR75Q8IWA0 830 aaKnown RBP19.97■□□□□ 0.79
PCDHB11-202ENST00000624887 NSMCE1Q8WV22 266 aa19.97■□□□□ 0.79
PCDHB11-202ENST00000624887 TLE6Q9H808 572 aa19.97■□□□□ 0.79
PCDHB11-202ENST00000624887 CD248Q9HCU0 757 aa19.97■□□□□ 0.79
PCDHB11-202ENST00000624887 SLC2A6Q9UGQ3 507 aa19.97■□□□□ 0.79
PCDHB11-202ENST00000624887 ANKRD6Q9Y2G4 727 aa19.97■□□□□ 0.79
PCDHB11-202ENST00000624887 ADAM12O43184 909 aa19.96■□□□□ 0.79
PCDHB11-202ENST00000624887 EFEMP2O95967 443 aa19.96■□□□□ 0.79
PCDHB11-202ENST00000624887 POLD2P49005 469 aa19.96■□□□□ 0.79
PCDHB11-202ENST00000624887 MAPKAPK2P49137 400 aa19.96■□□□□ 0.79
PCDHB11-202ENST00000624887 YBEYP58557 167 aaPredicted RBP19.96■□□□□ 0.79
PCDHB11-202ENST00000624887 MAXP61244 160 aa19.96■□□□□ 0.79
PCDHB11-202ENST00000624887 IL10RBQ08334 325 aa19.96■□□□□ 0.79
PCDHB11-202ENST00000624887 SERINC3Q13530 473 aa19.96■□□□□ 0.79
PCDHB11-202ENST00000624887 TNS4Q8IZW8 715 aa19.96■□□□□ 0.79
PCDHB11-202ENST00000624887 CDK5RAP1Q96SZ6 601 aaKnown RBP19.96■□□□□ 0.79
PCDHB11-202ENST00000624887 HIPK3Q9H422 1215 aa19.96■□□□□ 0.79
PCDHB11-202ENST00000624887 NMRAL1Q9HBL8 299 aa19.96■□□□□ 0.79
PCDHB11-202ENST00000624887 MTRRQ9UBK8 725 aa19.96■□□□□ 0.79
PCDHB11-202ENST00000624887 DNAJC16Q9Y2G8 782 aa19.96■□□□□ 0.79
PCDHB11-202ENST00000624887 A8MUI8 341 aa19.95■□□□□ 0.78
PCDHB11-202ENST00000624887 G3V2L1 256 aa19.95■□□□□ 0.78
PCDHB11-202ENST00000624887 CCDC22O60826 627 aa19.95■□□□□ 0.78
PCDHB11-202ENST00000624887 MMP2P08253 660 aa19.95■□□□□ 0.78
PCDHB11-202ENST00000624887 CALB2P22676 271 aa19.95■□□□□ 0.78
PCDHB11-202ENST00000624887 CD86P42081 329 aa19.95■□□□□ 0.78
PCDHB11-202ENST00000624887 CCL23P55773 120 aa19.95■□□□□ 0.78
PCDHB11-202ENST00000624887 ITKQ08881 620 aa19.95■□□□□ 0.78
PCDHB11-202ENST00000624887 LCA5Q86VQ0 697 aa19.95■□□□□ 0.78
PCDHB11-202ENST00000624887 CIR1Q86X95 450 aaPredicted RBP19.95■□□□□ 0.78
PCDHB11-202ENST00000624887 ZNF354CQ86Y25 554 aa19.95■□□□□ 0.78
PCDHB11-202ENST00000624887 DENND6AQ8IWF6 608 aa19.95■□□□□ 0.78
PCDHB11-202ENST00000624887 PPP4R1Q8TF05 950 aa19.95■□□□□ 0.78
PCDHB11-202ENST00000624887 TADA1Q96BN2 335 aa19.95■□□□□ 0.78
PCDHB11-202ENST00000624887 SORT1Q99523 831 aa19.95■□□□□ 0.78
PCDHB11-202ENST00000624887 STN1Q9H668 368 aaKnown RBP19.95■□□□□ 0.78
PCDHB11-202ENST00000624887 TLK1Q9UKI8 766 aa19.95■□□□□ 0.78
PCDHB11-202ENST00000624887 HEATR9A2RTY3 570 aa19.95■□□□□ 0.78
PCDHB11-202ENST00000624887 PARNO95453 639 aaKnown RBP19.95■□□□□ 0.78
PCDHB11-202ENST00000624887 TACR2P21452 398 aa19.95■□□□□ 0.78
PCDHB11-202ENST00000624887 OR1E1P30953 314 aa19.95■□□□□ 0.78
PCDHB11-202ENST00000624887 SLC8A1P32418 973 aa19.95■□□□□ 0.78
PCDHB11-202ENST00000624887 ALDH7A1P49419 539 aaKnown RBP19.95■□□□□ 0.78
PCDHB11-202ENST00000624887 HARS2P49590 506 aaKnown RBP19.95■□□□□ 0.78
PCDHB11-202ENST00000624887 ABCE1P61221 599 aaKnown RBP19.95■□□□□ 0.78
PCDHB11-202ENST00000624887 DSC2Q02487 901 aa19.95■□□□□ 0.78
PCDHB11-202ENST00000624887 ITGA9Q13797 1035 aa19.95■□□□□ 0.78
PCDHB11-202ENST00000624887 USP10Q14694 798 aaKnown RBP19.95■□□□□ 0.78
PCDHB11-202ENST00000624887 USP41Q3LFD5 358 aa19.95■□□□□ 0.78
PCDHB11-202ENST00000624887 MYEOVQ96EZ4 313 aa19.95■□□□□ 0.78
PCDHB11-202ENST00000624887 RANBP9Q96S59 729 aa19.95■□□□□ 0.78
PCDHB11-202ENST00000624887 C1QTNF1Q9BXJ1 281 aa19.95■□□□□ 0.78
PCDHB11-202ENST00000624887 APOA4P06727 396 aa19.94■□□□□ 0.78
PCDHB11-202ENST00000624887 DNAJB1P25685 340 aa19.94■□□□□ 0.78
PCDHB11-202ENST00000624887 TUFMP49411 452 aaKnown RBP19.94■□□□□ 0.78
PCDHB11-202ENST00000624887 SERPINH1P50454 418 aaKnown RBP19.94■□□□□ 0.78
PCDHB11-202ENST00000624887 KCNQ1P51787 676 aa19.94■□□□□ 0.78
PCDHB11-202ENST00000624887 MPP1Q00013 466 aa19.94■□□□□ 0.78
PCDHB11-202ENST00000624887 CTBP1Q13363 440 aa19.94■□□□□ 0.78
PCDHB11-202ENST00000624887 THOC5Q13769 683 aaKnown RBP19.94■□□□□ 0.78
PCDHB11-202ENST00000624887 SEPT6Q14141 434 aa19.94■□□□□ 0.78
PCDHB11-202ENST00000624887 C5orf22Q49AR2 442 aa19.94■□□□□ 0.78
PCDHB11-202ENST00000624887 ATG14Q6ZNE5 492 aa19.94■□□□□ 0.78
PCDHB11-202ENST00000624887 RAPH1Q70E73 1250 aa19.94■□□□□ 0.78
PCDHB11-202ENST00000624887 LONP2Q86WA8 852 aa19.94■□□□□ 0.78
PCDHB11-202ENST00000624887 SLC25A41Q8N5S1 370 aa19.94■□□□□ 0.78
PCDHB11-202ENST00000624887 C2CD4AQ8NCU7 369 aaPredicted RBP19.94■□□□□ 0.78
PCDHB11-202ENST00000624887 FAM167BQ9BTA0 163 aa19.94■□□□□ 0.78
PCDHB11-202ENST00000624887 CRISPLD2Q9H0B8 497 aa19.94■□□□□ 0.78
PCDHB11-202ENST00000624887 MID2Q9UJV3 735 aa19.94■□□□□ 0.78
PCDHB11-202ENST00000624887 DNMT3LQ9UJW3 386 aa19.94■□□□□ 0.78
PCDHB11-202ENST00000624887 BACE2Q9Y5Z0 518 aa19.94■□□□□ 0.78
PCDHB11-202ENST00000624887 CAPN14A8MX76 684 aa19.94■□□□□ 0.78
PCDHB11-202ENST00000624887 ARRB2P32121 409 aa19.94■□□□□ 0.78
PCDHB11-202ENST00000624887 ATP5C1P36542 298 aaKnown RBP19.94■□□□□ 0.78
PCDHB11-202ENST00000624887 SLC1A2P43004 574 aa19.94■□□□□ 0.78
PCDHB11-202ENST00000624887 ATN1P54259 1190 aaPredicted RBP19.94■□□□□ 0.78
PCDHB11-202ENST00000624887 MSLNQ13421 630 aaPredicted RBP19.94■□□□□ 0.78
PCDHB11-202ENST00000624887 IHHQ14623 411 aa19.94■□□□□ 0.78
PCDHB11-202ENST00000624887 SNX30Q5VWJ9 437 aa19.94■□□□□ 0.78
PCDHB11-202ENST00000624887 ANKRD33Q7Z3H0 272 aa19.94■□□□□ 0.78
PCDHB11-202ENST00000624887 RNF168Q8IYW5 571 aaPredicted RBP19.94■□□□□ 0.78
PCDHB11-202ENST00000624887 PGBD5Q8N414 524 aa19.94■□□□□ 0.78
PCDHB11-202ENST00000624887 ARRDC2Q8TBH0 407 aa19.94■□□□□ 0.78
PCDHB11-202ENST00000624887 BTBD10Q9BSF8 475 aa19.94■□□□□ 0.78
PCDHB11-202ENST00000624887 FAM96AQ9H5X1 160 aa19.94■□□□□ 0.78
PCDHB11-202ENST00000624887 ARMCX1Q9P291 453 aa19.94■□□□□ 0.78
PCDHB11-202ENST00000624887 MICAL3Q7RTP6 2002 aa19.93■□□□□ 0.78
PCDHB11-202ENST00000624887 F5H5T6 163 aa19.93■□□□□ 0.78
PCDHB11-202ENST00000624887 SLC35E2BP0CK96 405 aa19.93■□□□□ 0.78
PCDHB11-202ENST00000624887 COL6A2P12110 1019 aa19.93■□□□□ 0.78
PCDHB11-202ENST00000624887 OR1D2P34982 312 aa19.93■□□□□ 0.78
PCDHB11-202ENST00000624887 ACVRL1P37023 503 aa19.93■□□□□ 0.78
PCDHB11-202ENST00000624887 MNX1P50219 401 aaPredicted RBP19.93■□□□□ 0.78
PCDHB11-202ENST00000624887 SLC12A1Q13621 1099 aa19.93■□□□□ 0.78
PCDHB11-202ENST00000624887 LBRQ14739 615 aaKnown RBP19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms