RNA–Protein interactions for RNA: ENST00000623466.1

PCDHB17P-202, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 3,066 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-202ENST00000623466 CRTAMO95727 393 aa13.59□□□□□ -0.23
PCDHB17P-202ENST00000623466 ATP5BP06576 529 aaKnown RBP13.59□□□□□ -0.23
PCDHB17P-202ENST00000623466 OR4Q2P0C623 313 aa13.59□□□□□ -0.23
PCDHB17P-202ENST00000623466 SRGAP2BP0DMP2 458 aa13.59□□□□□ -0.23
PCDHB17P-202ENST00000623466 NELFEP18615 380 aaKnown RBP13.59□□□□□ -0.23
PCDHB17P-202ENST00000623466 PSMB4P28070 264 aa13.59□□□□□ -0.23
PCDHB17P-202ENST00000623466 NAA20P61599 178 aa13.59□□□□□ -0.23
PCDHB17P-202ENST00000623466 OGFRL1Q5TC84 451 aaPredicted RBP13.59□□□□□ -0.23
PCDHB17P-202ENST00000623466 KLHDC10Q6PID8 442 aa13.59□□□□□ -0.23
PCDHB17P-202ENST00000623466 C17orf99Q6UX52 265 aa13.59□□□□□ -0.23
PCDHB17P-202ENST00000623466 AGMOQ6ZNB7 445 aa13.59□□□□□ -0.23
PCDHB17P-202ENST00000623466 PID1Q7Z2X4 250 aa13.59□□□□□ -0.23
PCDHB17P-202ENST00000623466 KDELC2Q7Z4H8 507 aa13.59□□□□□ -0.23
PCDHB17P-202ENST00000623466 PTAR1Q7Z6K3 402 aaPredicted RBP13.59□□□□□ -0.23
PCDHB17P-202ENST00000623466 DCLK2Q8N568 766 aa13.59□□□□□ -0.23
PCDHB17P-202ENST00000623466 RNF139Q8WU17 664 aa13.59□□□□□ -0.23
PCDHB17P-202ENST00000623466 P2RY11Q96G91 374 aa13.59□□□□□ -0.23
PCDHB17P-202ENST00000623466 ZNF670Q9BS34 389 aa13.59□□□□□ -0.23
PCDHB17P-202ENST00000623466 C11orf84Q9BUA3 381 aaPredicted RBP13.59□□□□□ -0.23
PCDHB17P-202ENST00000623466 SNX15Q9NRS6 342 aa13.59□□□□□ -0.23
PCDHB17P-202ENST00000623466 GDAP2Q9NXN4 497 aa13.59□□□□□ -0.23
PCDHB17P-202ENST00000623466 TUBA8Q9NY65 449 aaPredicted RBP13.59□□□□□ -0.23
PCDHB17P-202ENST00000623466 ITGB1BP2Q9UKP3 347 aa13.59□□□□□ -0.23
PCDHB17P-202ENST00000623466 AP4B1Q9Y6B7 739 aa13.59□□□□□ -0.23
PCDHB17P-202ENST00000623466 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.58□□□□□ -0.23
PCDHB17P-202ENST00000623466 FBXO21O94952 628 aa13.58□□□□□ -0.23
PCDHB17P-202ENST00000623466 MYCP01106 439 aaPredicted RBP13.58□□□□□ -0.23
PCDHB17P-202ENST00000623466 THP07101 528 aa13.58□□□□□ -0.23
PCDHB17P-202ENST00000623466 ENO3P13929 434 aaPredicted RBP13.58□□□□□ -0.23
PCDHB17P-202ENST00000623466 KCNE1P15382 129 aa13.58□□□□□ -0.23
PCDHB17P-202ENST00000623466 GRK2P25098 689 aa13.58□□□□□ -0.23
PCDHB17P-202ENST00000623466 TMED10P49755 219 aaKnown RBP13.58□□□□□ -0.23
PCDHB17P-202ENST00000623466 PGFP49763 221 aa13.58□□□□□ -0.23
PCDHB17P-202ENST00000623466 SEMA5AQ13591 1074 aa13.58□□□□□ -0.23
PCDHB17P-202ENST00000623466 SDHAF4Q5VUM1 108 aa13.58□□□□□ -0.23
PCDHB17P-202ENST00000623466 LILRA2Q8N149 483 aa13.58□□□□□ -0.23
PCDHB17P-202ENST00000623466 TTC39CQ8N584 583 aa13.58□□□□□ -0.23
PCDHB17P-202ENST00000623466 ACVR1CQ8NER5 493 aa13.58□□□□□ -0.23
PCDHB17P-202ENST00000623466 ZFP28Q8NHY6 868 aa13.58□□□□□ -0.23
PCDHB17P-202ENST00000623466 USP33Q8TEY7 942 aa13.58□□□□□ -0.23
PCDHB17P-202ENST00000623466 HTR3CQ8WXA8 447 aa13.58□□□□□ -0.23
PCDHB17P-202ENST00000623466 TRIB2Q92519 343 aa13.58□□□□□ -0.23
PCDHB17P-202ENST00000623466 CASP10Q92851 521 aa13.58□□□□□ -0.23
PCDHB17P-202ENST00000623466 CENPOQ9BU64 300 aa13.58□□□□□ -0.23
PCDHB17P-202ENST00000623466 TRPV5Q9NQA5 729 aa13.58□□□□□ -0.23
PCDHB17P-202ENST00000623466 DDIT4Q9NX09 232 aa13.58□□□□□ -0.23
PCDHB17P-202ENST00000623466 FZD10Q9ULW2 581 aa13.58□□□□□ -0.23
PCDHB17P-202ENST00000623466 RNF103O00237 685 aa13.58□□□□□ -0.24
PCDHB17P-202ENST00000623466 TPH1P17752 444 aa13.58□□□□□ -0.24
PCDHB17P-202ENST00000623466 MPSTP25325 297 aa13.58□□□□□ -0.24
PCDHB17P-202ENST00000623466 PTPN9P43378 593 aa13.58□□□□□ -0.24
PCDHB17P-202ENST00000623466 MS4A2Q01362 244 aa13.58□□□□□ -0.24
PCDHB17P-202ENST00000623466 FLOT2Q14254 428 aa13.58□□□□□ -0.24
PCDHB17P-202ENST00000623466 SLC25A52Q3SY17 297 aa13.58□□□□□ -0.24
PCDHB17P-202ENST00000623466 TMEM214Q6NUQ4 689 aaKnown RBP13.58□□□□□ -0.24
PCDHB17P-202ENST00000623466 CENPIQ92674 756 aaPredicted RBP13.58□□□□□ -0.24
PCDHB17P-202ENST00000623466 LRGUKQ96M69 825 aa13.58□□□□□ -0.24
PCDHB17P-202ENST00000623466 FCRL3Q96P31 734 aaPredicted RBP13.58□□□□□ -0.24
PCDHB17P-202ENST00000623466 PPP1R10Q96QC0 940 aaKnown RBP13.58□□□□□ -0.24
PCDHB17P-202ENST00000623466 PSMD13Q9UNM6 376 aa13.58□□□□□ -0.24
PCDHB17P-202ENST00000623466 M0QZ92 97 aa13.58□□□□□ -0.24
PCDHB17P-202ENST00000623466 CASQ2O14958 399 aaPredicted RBP13.58□□□□□ -0.24
PCDHB17P-202ENST00000623466 XPO1O14980 1071 aaKnown RBP13.58□□□□□ -0.24
PCDHB17P-202ENST00000623466 SERPINB7O75635 380 aa13.58□□□□□ -0.24
PCDHB17P-202ENST00000623466 ALDH1A2O94788 518 aa13.58□□□□□ -0.24
PCDHB17P-202ENST00000623466 CNTFP26441 200 aa13.58□□□□□ -0.24
PCDHB17P-202ENST00000623466 PCSK6P29122 969 aa13.58□□□□□ -0.24
PCDHB17P-202ENST00000623466 HARS2P49590 506 aaKnown RBP13.58□□□□□ -0.24
PCDHB17P-202ENST00000623466 MRPS6P82932 125 aaKnown RBP13.58□□□□□ -0.24
PCDHB17P-202ENST00000623466 PDK1Q15118 436 aa13.58□□□□□ -0.24
PCDHB17P-202ENST00000623466 CLPPQ16740 277 aaPredicted RBP13.58□□□□□ -0.24
PCDHB17P-202ENST00000623466 MYLK3Q32MK0 819 aa13.58□□□□□ -0.24
PCDHB17P-202ENST00000623466 EPGNQ6UW88 154 aa13.58□□□□□ -0.24
PCDHB17P-202ENST00000623466 PATL1Q86TB9 770 aaKnown RBP13.58□□□□□ -0.24
PCDHB17P-202ENST00000623466 IFNL1Q8IU54 200 aa13.58□□□□□ -0.24
PCDHB17P-202ENST00000623466 TDRD5Q8NAT2 981 aaKnown RBP13.58□□□□□ -0.24
PCDHB17P-202ENST00000623466 HNRNPABQ99729 332 aaKnown RBP13.58□□□□□ -0.24
PCDHB17P-202ENST00000623466 UNKQ9C0B0 810 aaKnown RBP13.58□□□□□ -0.24
PCDHB17P-202ENST00000623466 CDH19Q9H159 772 aa13.58□□□□□ -0.24
PCDHB17P-202ENST00000623466 STN1Q9H668 368 aaKnown RBP13.58□□□□□ -0.24
PCDHB17P-202ENST00000623466 TCF7L2Q9NQB0 619 aa13.58□□□□□ -0.24
PCDHB17P-202ENST00000623466 TRMT13Q9NUP7 481 aaKnown RBP13.58□□□□□ -0.24
PCDHB17P-202ENST00000623466 TMLHEQ9NVH6 421 aa13.58□□□□□ -0.24
PCDHB17P-202ENST00000623466 PEX1O43933 1283 aa13.57□□□□□ -0.24
PCDHB17P-202ENST00000623466 PIK3R1P27986 724 aa13.57□□□□□ -0.24
PCDHB17P-202ENST00000623466 RPL5P46777 297 aaKnown RBP13.57□□□□□ -0.24
PCDHB17P-202ENST00000623466 FLT3LGP49771 235 aa13.57□□□□□ -0.24
PCDHB17P-202ENST00000623466 CDKL1Q00532 357 aa13.57□□□□□ -0.24
PCDHB17P-202ENST00000623466 MYBPC1Q00872 1141 aa13.57□□□□□ -0.24
PCDHB17P-202ENST00000623466 CACNB2Q08289 660 aaPredicted RBP13.57□□□□□ -0.24
PCDHB17P-202ENST00000623466 DMPKQ09013 629 aa13.57□□□□□ -0.24
PCDHB17P-202ENST00000623466 NXNQ6DKJ4 435 aa13.57□□□□□ -0.24
PCDHB17P-202ENST00000623466 DSELQ8IZU8 1212 aa13.57□□□□□ -0.24
PCDHB17P-202ENST00000623466 ACMSDQ8TDX5 336 aa13.57□□□□□ -0.24
PCDHB17P-202ENST00000623466 IRGQQ8WZA9 623 aa13.57□□□□□ -0.24
PCDHB17P-202ENST00000623466 RNF34Q969K3 372 aa13.57□□□□□ -0.24
PCDHB17P-202ENST00000623466 RCN3Q96D15 328 aa13.57□□□□□ -0.24
PCDHB17P-202ENST00000623466 BTBD9Q96Q07 612 aa13.57□□□□□ -0.24
PCDHB17P-202ENST00000623466 NUF2Q9BZD4 464 aa13.57□□□□□ -0.24
PCDHB17P-202ENST00000623466 DRC3Q9H069 523 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms