RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 DSELQ8IZU8 1212 aa9.74□□□□□ -0.85
IGHV3-54-201ENST00000622166 PGAM4Q8N0Y7 254 aa9.74□□□□□ -0.85
IGHV3-54-201ENST00000622166 ATPAF2Q8N5M1 289 aa9.74□□□□□ -0.85
IGHV3-54-201ENST00000622166 KDM1BQ8NB78 822 aa9.74□□□□□ -0.85
IGHV3-54-201ENST00000622166 KYQ8NBH2 561 aa9.74□□□□□ -0.85
IGHV3-54-201ENST00000622166 USP33Q8TEY7 942 aa9.74□□□□□ -0.85
IGHV3-54-201ENST00000622166 LENG1Q96BZ8 264 aaPredicted RBP9.74□□□□□ -0.85
IGHV3-54-201ENST00000622166 MAELQ96JY0 434 aaKnown RBP9.74□□□□□ -0.85
IGHV3-54-201ENST00000622166 FAR2Q96K12 515 aa9.74□□□□□ -0.85
IGHV3-54-201ENST00000622166 TUBGCP5Q96RT8 1024 aa9.74□□□□□ -0.85
IGHV3-54-201ENST00000622166 RANBP9Q96S59 729 aa9.74□□□□□ -0.85
IGHV3-54-201ENST00000622166 MRPL57Q9BQC6 102 aaKnown RBP9.74□□□□□ -0.85
IGHV3-54-201ENST00000622166 PRKD2Q9BZL6 878 aa9.74□□□□□ -0.85
IGHV3-54-201ENST00000622166 SHCBP1LQ9BZQ2 653 aa9.74□□□□□ -0.85
IGHV3-54-201ENST00000622166 SLC39A8Q9C0K1 460 aa9.74□□□□□ -0.85
IGHV3-54-201ENST00000622166 MRPL46Q9H2W6 279 aaKnown RBP9.74□□□□□ -0.85
IGHV3-54-201ENST00000622166 WDR55Q9H6Y2 383 aaPredicted RBP9.74□□□□□ -0.85
IGHV3-54-201ENST00000622166 CATSPERBQ9H7T0 1116 aa9.74□□□□□ -0.85
IGHV3-54-201ENST00000622166 ARNT2Q9HBZ2 717 aa9.74□□□□□ -0.85
IGHV3-54-201ENST00000622166 DMAP1Q9NPF5 467 aaPredicted RBP9.74□□□□□ -0.85
IGHV3-54-201ENST00000622166 MAN1C1Q9NR34 630 aa9.74□□□□□ -0.85
IGHV3-54-201ENST00000622166 TREX1Q9NSU2 369 aa9.74□□□□□ -0.85
IGHV3-54-201ENST00000622166 MRGBPQ9NV56 204 aa9.74□□□□□ -0.85
IGHV3-54-201ENST00000622166 UBP1Q9NZI7 540 aa9.74□□□□□ -0.85
IGHV3-54-201ENST00000622166 CPSF2Q9P2I0 782 aaKnown RBP9.74□□□□□ -0.85
IGHV3-54-201ENST00000622166 CACNG4Q9UBN1 327 aa9.74□□□□□ -0.85
IGHV3-54-201ENST00000622166 ZDHHC2Q9UIJ5 367 aa9.74□□□□□ -0.85
IGHV3-54-201ENST00000622166 DSEQ9UL01 958 aa9.74□□□□□ -0.85
IGHV3-54-201ENST00000622166 CDYLQ9Y232 598 aa9.74□□□□□ -0.85
IGHV3-54-201ENST00000622166 NYNRINQ9P2P1 1898 aaKnown RBP9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 IQCA1LA6NCM1 817 aa9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 ARL5CA6NH57 179 aa9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 M0QZQ0 153 aa9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 SDHDO14521 159 aa9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 AIM2O14862 343 aa9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 DENRO43583 198 aaKnown RBP9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 PAGE1O75459 146 aa9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 TADA2AO75478 443 aa9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 UPP2O95045 317 aa9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 RPLP2P05387 115 aaKnown RBP9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 HSPA1AP0DMV8 641 aaKnown RBP9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 HSPA1BP0DMV9 641 aaKnown RBP9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 STMN1P16949 149 aa9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 VCLP18206 1134 aa9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 PAMP19021 973 aa9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 BDNFP23560 247 aa9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 ATP5F1P24539 256 aaPredicted RBP9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 ALDH1A3P47895 512 aa9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 CD151P48509 253 aa9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 SCNN1GP51170 649 aa9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 NAGLUP54802 743 aa9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 PFKPQ01813 784 aa9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 POU4F1Q01851 419 aa9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 ILF2Q12905 390 aaKnown RBP9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 MED21Q13503 144 aa9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 PEX6Q13608 980 aa9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 ADGRE1Q14246 886 aa9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 PPP2R5DQ14738 602 aa9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 MAPRE1Q15691 268 aaKnown RBP9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 SLC14A2Q15849 920 aa9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 FSCN1Q16658 493 aaKnown RBP9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 CWF19L1Q69YN2 538 aaKnown RBP9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 ESRP1Q6NXG1 681 aaKnown RBP9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 SLC30A9Q6PML9 568 aa9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 KDELC1Q6UW63 502 aa9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 ARHGAP36Q6ZRI8 547 aa9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 PIWIL4Q7Z3Z4 852 aaKnown RBP9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 GALNT7Q86SF2 657 aa9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 CEP97Q8IW35 865 aa9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 MFSD6LQ8IWD5 586 aa9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 PQLC1Q8N2U9 271 aa9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 GALNT15Q8N3T1 639 aa9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 CATSPER1Q8NEC5 780 aa9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 SPATA22Q8NHS9 363 aa9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 NCSTNQ92542 709 aa9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 DLG3Q92796 817 aa9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 RNF34Q969K3 372 aa9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 NXNL1Q96CM4 212 aa9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 RHOBTB2Q9BYZ6 727 aa9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 SENP6Q9GZR1 1112 aaPredicted RBP9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 SMOC2Q9H3U7 446 aa9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 EFCAB1Q9HAE3 211 aa9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 ZBTB26Q9HCK0 441 aa9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 ABCC13Q9NSE7 274 aa9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 TBC1D13Q9NVG8 400 aa9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 TMLHEQ9NVH6 421 aa9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 OSER1Q9NX31 292 aa9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 UTP6Q9NYH9 597 aaKnown RBP9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 CLIC5Q9NZA1 410 aa9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 HACD3Q9P035 362 aa9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 XPR1Q9UBH6 696 aa9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 FBXO5Q9UKT4 447 aa9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 DTNAQ9Y4J8 743 aa9.73□□□□□ -0.85
IGHV3-54-201ENST00000622166 SCN10AQ9Y5Y9 1956 aa9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 GLTPD2A6NH11 291 aa9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 GOLGA8TH3BQL2 631 aa9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 DFFAO00273 331 aa9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 BCAS2O75934 225 aaPredicted RBP9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 VAPBO95292 243 aa9.72□□□□□ -0.85
IGHV3-54-201ENST00000622166 HLA-DQB2P05538 268 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms