RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 TPI1P60174 286 aa17.72■□□□□ 0.43
FAM3A-222ENST00000621967 ABCE1P61221 599 aaKnown RBP17.72■□□□□ 0.43
FAM3A-222ENST00000621967 CREMQ03060 361 aa17.72■□□□□ 0.43
FAM3A-222ENST00000621967 OLIG2Q13516 323 aa17.72■□□□□ 0.43
FAM3A-222ENST00000621967 RIPOR1Q6ZS17 1223 aa17.72■□□□□ 0.43
FAM3A-222ENST00000621967 CLEC14AQ86T13 490 aa17.72■□□□□ 0.43
FAM3A-222ENST00000621967 DCP1BQ8IZD4 617 aaKnown RBP17.72■□□□□ 0.43
FAM3A-222ENST00000621967 DTX3LQ8TDB6 740 aa17.72■□□□□ 0.43
FAM3A-222ENST00000621967 MICAL1Q8TDZ2 1067 aa17.72■□□□□ 0.43
FAM3A-222ENST00000621967 ZNF669Q96BR6 464 aaPredicted RBP17.72■□□□□ 0.43
FAM3A-222ENST00000621967 HDAC11Q96DB2 347 aa17.72■□□□□ 0.43
FAM3A-222ENST00000621967 TMEM209Q96SK2 561 aa17.72■□□□□ 0.43
FAM3A-222ENST00000621967 MCMBPQ9BTE3 642 aa17.72■□□□□ 0.43
FAM3A-222ENST00000621967 MED10Q9BTT4 135 aa17.72■□□□□ 0.43
FAM3A-222ENST00000621967 THTPAQ9BU02 230 aa17.72■□□□□ 0.43
FAM3A-222ENST00000621967 GBA3Q9H227 469 aa17.72■□□□□ 0.43
FAM3A-222ENST00000621967 CNGB3Q9NQW8 809 aa17.72■□□□□ 0.43
FAM3A-222ENST00000621967 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.72■□□□□ 0.43
FAM3A-222ENST00000621967 BFARQ9NZS9 450 aa17.72■□□□□ 0.43
FAM3A-222ENST00000621967 BACE2Q9Y5Z0 518 aa17.72■□□□□ 0.43
FAM3A-222ENST00000621967 MYBPHLA2RUH7 354 aa17.72■□□□□ 0.43
FAM3A-222ENST00000621967 YJEFN3A6XGL0 299 aa17.72■□□□□ 0.43
FAM3A-222ENST00000621967 MTSS1O43312 755 aa17.72■□□□□ 0.43
FAM3A-222ENST00000621967 OR4Q2P0C623 313 aa17.72■□□□□ 0.43
FAM3A-222ENST00000621967 RPL17P18621 184 aaKnown RBP17.72■□□□□ 0.43
FAM3A-222ENST00000621967 CD68P34810 354 aaPredicted RBP17.72■□□□□ 0.43
FAM3A-222ENST00000621967 IDH3AP50213 366 aa17.72■□□□□ 0.43
FAM3A-222ENST00000621967 MAPRE1Q15691 268 aaKnown RBP17.72■□□□□ 0.43
FAM3A-222ENST00000621967 C6orf163Q5TEZ5 329 aa17.72■□□□□ 0.43
FAM3A-222ENST00000621967 PLPP4Q5VZY2 271 aa17.72■□□□□ 0.43
FAM3A-222ENST00000621967 CAPRIN2Q6IMN6 1127 aaKnown RBP17.72■□□□□ 0.43
FAM3A-222ENST00000621967 IRGCQ6NXR0 463 aa17.72■□□□□ 0.43
FAM3A-222ENST00000621967 CMC1Q7Z7K0 106 aa17.72■□□□□ 0.43
FAM3A-222ENST00000621967 FAM35AQ86V20 835 aa17.72■□□□□ 0.43
FAM3A-222ENST00000621967 GPR65Q8IYL9 337 aa17.72■□□□□ 0.43
FAM3A-222ENST00000621967 NPWQ8N729 165 aa17.72■□□□□ 0.43
FAM3A-222ENST00000621967 CLPTM1LQ96KA5 538 aa17.72■□□□□ 0.43
FAM3A-222ENST00000621967 SMOQ99835 787 aa17.72■□□□□ 0.43
FAM3A-222ENST00000621967 ZCWPW1Q9H0M4 648 aa17.72■□□□□ 0.43
FAM3A-222ENST00000621967 GPAMQ9HCL2 828 aa17.72■□□□□ 0.43
FAM3A-222ENST00000621967 PNPOQ9NVS9 261 aa17.72■□□□□ 0.43
FAM3A-222ENST00000621967 ANGPTL2Q9UKU9 493 aa17.72■□□□□ 0.43
FAM3A-222ENST00000621967 WASF2Q9Y6W5 498 aa17.72■□□□□ 0.43
FAM3A-222ENST00000621967 A0A088AWK7 358 aa17.71■□□□□ 0.43
FAM3A-222ENST00000621967 SIN3BO75182 1162 aa17.71■□□□□ 0.43
FAM3A-222ENST00000621967 CXCL14O95715 111 aa17.71■□□□□ 0.43
FAM3A-222ENST00000621967 CPA3P15088 417 aa17.71■□□□□ 0.43
FAM3A-222ENST00000621967 PAX7P23759 505 aa17.71■□□□□ 0.43
FAM3A-222ENST00000621967 DNAJB1P25685 340 aa17.71■□□□□ 0.43
FAM3A-222ENST00000621967 ERVFC1P60507 584 aa17.71■□□□□ 0.43
FAM3A-222ENST00000621967 KLC1Q07866 573 aa17.71■□□□□ 0.43
FAM3A-222ENST00000621967 GALNT2Q10471 571 aa17.71■□□□□ 0.43
FAM3A-222ENST00000621967 ANKRD20A4Q4UJ75 823 aa17.71■□□□□ 0.43
FAM3A-222ENST00000621967 SLC39A12Q504Y0 691 aa17.71■□□□□ 0.43
FAM3A-222ENST00000621967 ZMIZ2Q8NF64 920 aa17.71■□□□□ 0.43
FAM3A-222ENST00000621967 PGLYRP2Q96PD5 576 aa17.71■□□□□ 0.43
FAM3A-222ENST00000621967 MLPHQ9BV36 600 aaPredicted RBP17.71■□□□□ 0.43
FAM3A-222ENST00000621967 ZNF358Q9NW07 568 aa17.71■□□□□ 0.43
FAM3A-222ENST00000621967 RRN3Q9NYV6 651 aa17.71■□□□□ 0.43
FAM3A-222ENST00000621967 TRHDEQ9UKU6 1024 aa17.71■□□□□ 0.43
FAM3A-222ENST00000621967 ZBTB24O43167 697 aaPredicted RBP17.7■□□□□ 0.42
FAM3A-222ENST00000621967 USP12O75317 370 aa17.7■□□□□ 0.42
FAM3A-222ENST00000621967 MPOP05164 745 aa17.7■□□□□ 0.42
FAM3A-222ENST00000621967 OR1D2P34982 312 aa17.7■□□□□ 0.42
FAM3A-222ENST00000621967 ZNF135P52742 658 aaPredicted RBP17.7■□□□□ 0.42
FAM3A-222ENST00000621967 ZRSR2Q15696 482 aaKnown RBP17.7■□□□□ 0.42
FAM3A-222ENST00000621967 NFE2Q16621 373 aaPredicted RBP17.7■□□□□ 0.42
FAM3A-222ENST00000621967 SLC8B1Q6J4K2 584 aa17.7■□□□□ 0.42
FAM3A-222ENST00000621967 FSTL4Q6MZW2 842 aa17.7■□□□□ 0.42
FAM3A-222ENST00000621967 RSPO2Q6UXX9 243 aaPredicted RBP17.7■□□□□ 0.42
FAM3A-222ENST00000621967 BHLHA9Q7RTU4 235 aa17.7■□□□□ 0.42
FAM3A-222ENST00000621967 GPRIN1Q7Z2K8 1008 aa17.7■□□□□ 0.42
FAM3A-222ENST00000621967 STRA8Q7Z7C7 330 aa17.7■□□□□ 0.42
FAM3A-222ENST00000621967 PLD6Q8N2A8 252 aaKnown RBP17.7■□□□□ 0.42
FAM3A-222ENST00000621967 ADAM32Q8TC27 787 aa17.7■□□□□ 0.42
FAM3A-222ENST00000621967 GDPD5Q8WTR4 605 aa17.7■□□□□ 0.42
FAM3A-222ENST00000621967 MYLPFQ96A32 169 aa17.7■□□□□ 0.42
FAM3A-222ENST00000621967 PCED1BQ96HM7 432 aa17.7■□□□□ 0.42
FAM3A-222ENST00000621967 AGAP3Q96P47 875 aa17.7■□□□□ 0.42
FAM3A-222ENST00000621967 VAT1Q99536 393 aa17.7■□□□□ 0.42
FAM3A-222ENST00000621967 TBC1D4O60343 1298 aa17.7■□□□□ 0.42
FAM3A-222ENST00000621967 AP1G2O75843 785 aa17.7■□□□□ 0.42
FAM3A-222ENST00000621967 GMPRP36959 345 aa17.7■□□□□ 0.42
FAM3A-222ENST00000621967 NPY2RP49146 381 aa17.7■□□□□ 0.42
FAM3A-222ENST00000621967 CSE1LP55060 971 aaKnown RBP17.7■□□□□ 0.42
FAM3A-222ENST00000621967 ZBTB17Q13105 803 aa17.7■□□□□ 0.42
FAM3A-222ENST00000621967 ITGA9Q13797 1035 aa17.7■□□□□ 0.42
FAM3A-222ENST00000621967 LBRQ14739 615 aaKnown RBP17.7■□□□□ 0.42
FAM3A-222ENST00000621967 SMAD1Q15797 465 aaKnown RBP17.7■□□□□ 0.42
FAM3A-222ENST00000621967 TMCO4Q5TGY1 634 aa17.7■□□□□ 0.42
FAM3A-222ENST00000621967 FAM171BQ6P995 826 aa17.7■□□□□ 0.42
FAM3A-222ENST00000621967 PPFIBP2Q8ND30 876 aa17.7■□□□□ 0.42
FAM3A-222ENST00000621967 SPDL1Q96EA4 605 aa17.7■□□□□ 0.42
FAM3A-222ENST00000621967 TMEM30AQ9NV96 361 aa17.7■□□□□ 0.42
FAM3A-222ENST00000621967 MAGEB16A2A368 324 aa17.69■□□□□ 0.42
FAM3A-222ENST00000621967 HHLA1C9JL84 531 aa17.69■□□□□ 0.42
FAM3A-222ENST00000621967 G3V2L1 256 aa17.69■□□□□ 0.42
FAM3A-222ENST00000621967 LTFP02788 710 aa17.69■□□□□ 0.42
FAM3A-222ENST00000621967 ANPEPP15144 967 aa17.69■□□□□ 0.42
FAM3A-222ENST00000621967 CSRP3P50461 194 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms