RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 CLDN2P57739 230 aa17.45■□□□□ 0.38
HMGN3-203ENST00000620514 KLHL30Q0D2K2 578 aa17.45■□□□□ 0.38
HMGN3-203ENST00000620514 FGL2Q14314 439 aa17.45■□□□□ 0.38
HMGN3-203ENST00000620514 CA9Q16790 459 aa17.45■□□□□ 0.38
HMGN3-203ENST00000620514 KLHL40Q2TBA0 621 aa17.45■□□□□ 0.38
HMGN3-203ENST00000620514 INAVAQ3KP66 663 aa17.45■□□□□ 0.38
HMGN3-203ENST00000620514 TMEM259Q4ZIN3 620 aa17.45■□□□□ 0.38
HMGN3-203ENST00000620514 PPP1R2P3Q6NXS1 205 aa17.45■□□□□ 0.38
HMGN3-203ENST00000620514 FBXL19Q6PCT2 694 aa17.45■□□□□ 0.38
HMGN3-203ENST00000620514 MARCH9Q86YJ5 346 aa17.45■□□□□ 0.38
HMGN3-203ENST00000620514 PLPP6Q8IY26 295 aa17.45■□□□□ 0.38
HMGN3-203ENST00000620514 EID2Q8N6I1 236 aa17.45■□□□□ 0.38
HMGN3-203ENST00000620514 OR2AP1Q8NGE2 309 aa17.45■□□□□ 0.38
HMGN3-203ENST00000620514 KLHDC7BQ96G42 594 aa17.45■□□□□ 0.38
HMGN3-203ENST00000620514 PEBP4Q96S96 227 aa17.45■□□□□ 0.38
HMGN3-203ENST00000620514 CAAP1Q9H8G2 361 aa17.45■□□□□ 0.38
HMGN3-203ENST00000620514 FTSJ1Q9UET6 329 aa17.45■□□□□ 0.38
HMGN3-203ENST00000620514 FADS3Q9Y5Q0 445 aa17.45■□□□□ 0.38
HMGN3-203ENST00000620514 SPEGQ15772 3267 aa17.45■□□□□ 0.38
HMGN3-203ENST00000620514 TMEM191CA6NGB0 347 aa17.44■□□□□ 0.38
HMGN3-203ENST00000620514 C16orf96A6NNT2 1141 aa17.44■□□□□ 0.38
HMGN3-203ENST00000620514 KRIT1O00522 736 aa17.44■□□□□ 0.38
HMGN3-203ENST00000620514 YKT6O15498 198 aa17.44■□□□□ 0.38
HMGN3-203ENST00000620514 THEGLP0DJG4 465 aa17.44■□□□□ 0.38
HMGN3-203ENST00000620514 HNRNPA2B1P22626 353 aaKnown RBP17.44■□□□□ 0.38
HMGN3-203ENST00000620514 AIF1P55008 147 aa17.44■□□□□ 0.38
HMGN3-203ENST00000620514 SNRPD1P62314 119 aaKnown RBP17.44■□□□□ 0.38
HMGN3-203ENST00000620514 FANCCQ00597 558 aa17.44■□□□□ 0.38
HMGN3-203ENST00000620514 OVGP1Q12889 678 aa17.44■□□□□ 0.38
HMGN3-203ENST00000620514 MYLK3Q32MK0 819 aa17.44■□□□□ 0.38
HMGN3-203ENST00000620514 CCNI2Q6ZMN8 369 aaPredicted RBP17.44■□□□□ 0.38
HMGN3-203ENST00000620514 GCNT7Q6ZNI0 430 aa17.44■□□□□ 0.38
HMGN3-203ENST00000620514 KANSL1Q7Z3B3 1105 aa17.44■□□□□ 0.38
HMGN3-203ENST00000620514 EDEM3Q9BZQ6 932 aa17.44■□□□□ 0.38
HMGN3-203ENST00000620514 CATSPERBQ9H7T0 1116 aa17.44■□□□□ 0.38
HMGN3-203ENST00000620514 CNOT8Q9UFF9 292 aaKnown RBP17.44■□□□□ 0.38
HMGN3-203ENST00000620514 PCSK1NQ9UHG2 260 aa17.44■□□□□ 0.38
HMGN3-203ENST00000620514 GGT7Q9UJ14 662 aa17.44■□□□□ 0.38
HMGN3-203ENST00000620514 AP4E1Q9UPM8 1137 aa17.44■□□□□ 0.38
HMGN3-203ENST00000620514 ITM2BQ9Y287 266 aa17.44■□□□□ 0.38
HMGN3-203ENST00000620514 PLXNB3Q9ULL4 1909 aa17.44■□□□□ 0.38
HMGN3-203ENST00000620514 PTPRBP23467 1997 aa17.43■□□□□ 0.38
HMGN3-203ENST00000620514 TMEM8BA6NDV4 472 aa17.43■□□□□ 0.38
HMGN3-203ENST00000620514 ZSCAN5CA6NGD5 496 aaPredicted RBP17.43■□□□□ 0.38
HMGN3-203ENST00000620514 RAD51BO15315 384 aa17.43■□□□□ 0.38
HMGN3-203ENST00000620514 MAGEC1O60732 1142 aa17.43■□□□□ 0.38
HMGN3-203ENST00000620514 SDC3O75056 442 aa17.43■□□□□ 0.38
HMGN3-203ENST00000620514 POP4O95707 220 aaKnown RBP17.43■□□□□ 0.38
HMGN3-203ENST00000620514 UGT2B4P06133 528 aa17.43■□□□□ 0.38
HMGN3-203ENST00000620514 GZMAP12544 262 aa17.43■□□□□ 0.38
HMGN3-203ENST00000620514 AKT2P31751 481 aa17.43■□□□□ 0.38
HMGN3-203ENST00000620514 YBEYP58557 167 aaPredicted RBP17.43■□□□□ 0.38
HMGN3-203ENST00000620514 TPI1P60174 286 aa17.43■□□□□ 0.38
HMGN3-203ENST00000620514 DNAJC3Q13217 504 aa17.43■□□□□ 0.38
HMGN3-203ENST00000620514 SERINC3Q13530 473 aa17.43■□□□□ 0.38
HMGN3-203ENST00000620514 ZNF805Q5CZA5 627 aa17.43■□□□□ 0.38
HMGN3-203ENST00000620514 UMODL1-AS1Q8N2C9 162 aa17.43■□□□□ 0.38
HMGN3-203ENST00000620514 OXR1Q8N573 874 aa17.43■□□□□ 0.38
HMGN3-203ENST00000620514 OR13H1Q8NG92 308 aa17.43■□□□□ 0.38
HMGN3-203ENST00000620514 ZCCHC14Q8WYQ9 949 aaKnown RBP17.43■□□□□ 0.38
HMGN3-203ENST00000620514 ZNF653Q96CK0 615 aa17.43■□□□□ 0.38
HMGN3-203ENST00000620514 CNDP2Q96KP4 475 aaKnown RBP17.43■□□□□ 0.38
HMGN3-203ENST00000620514 KLHL32Q96NJ5 620 aa17.43■□□□□ 0.38
HMGN3-203ENST00000620514 KCTD15Q96SI1 283 aaPredicted RBP17.43■□□□□ 0.38
HMGN3-203ENST00000620514 SNRNP25Q9BV90 132 aaKnown RBP17.43■□□□□ 0.38
HMGN3-203ENST00000620514 DHX35Q9H5Z1 703 aaKnown RBP17.43■□□□□ 0.38
HMGN3-203ENST00000620514 ENC1O14682 589 aa17.42■□□□□ 0.38
HMGN3-203ENST00000620514 FGF10O15520 208 aaPredicted RBP17.42■□□□□ 0.38
HMGN3-203ENST00000620514 SPINT1O43278 529 aa17.42■□□□□ 0.38
HMGN3-203ENST00000620514 AP1G1O43747 822 aa17.42■□□□□ 0.38
HMGN3-203ENST00000620514 LDOC1O95751 146 aaPredicted RBP17.42■□□□□ 0.38
HMGN3-203ENST00000620514 PAK4O96013 591 aaPredicted RBP17.42■□□□□ 0.38
HMGN3-203ENST00000620514 DESP17661 470 aa17.42■□□□□ 0.38
HMGN3-203ENST00000620514 PBX1P40424 430 aa17.42■□□□□ 0.38
HMGN3-203ENST00000620514 RHOAP61586 193 aa17.42■□□□□ 0.38
HMGN3-203ENST00000620514 RPS21P63220 83 aaKnown RBP17.42■□□□□ 0.38
HMGN3-203ENST00000620514 CYTH1Q15438 398 aa17.42■□□□□ 0.38
HMGN3-203ENST00000620514 PARP15Q460N3 678 aa17.42■□□□□ 0.38
HMGN3-203ENST00000620514 FIGNQ5HY92 759 aa17.42■□□□□ 0.38
HMGN3-203ENST00000620514 LRRC73Q5JTD7 316 aa17.42■□□□□ 0.38
HMGN3-203ENST00000620514 KIAA1161Q6NSJ0 714 aa17.42■□□□□ 0.38
HMGN3-203ENST00000620514 DHRS13Q6UX07 377 aa17.42■□□□□ 0.38
HMGN3-203ENST00000620514 CYP4V2Q6ZWL3 525 aaPredicted RBP17.42■□□□□ 0.38
HMGN3-203ENST00000620514 TMPRSS7Q7RTY8 843 aa17.42■□□□□ 0.38
HMGN3-203ENST00000620514 CELF6Q96J87 481 aaKnown RBP17.42■□□□□ 0.38
HMGN3-203ENST00000620514 LRIG1Q96JA1 1093 aa17.42■□□□□ 0.38
HMGN3-203ENST00000620514 FEM1CQ96JP0 617 aa17.42■□□□□ 0.38
HMGN3-203ENST00000620514 BMFQ96LC9 184 aa17.42■□□□□ 0.38
HMGN3-203ENST00000620514 CALN1Q9BXU9 219 aa17.42■□□□□ 0.38
HMGN3-203ENST00000620514 SLC17A9Q9BYT1 436 aa17.42■□□□□ 0.38
HMGN3-203ENST00000620514 LRRC19Q9H756 370 aa17.42■□□□□ 0.38
HMGN3-203ENST00000620514 MYO1AQ9UBC5 1043 aa17.42■□□□□ 0.38
HMGN3-203ENST00000620514 LHX3Q9UBR4 397 aa17.42■□□□□ 0.38
HMGN3-203ENST00000620514 ASPMQ8IZT6 3477 aa17.42■□□□□ 0.38
HMGN3-203ENST00000620514 COL5A1P20908 1838 aaPredicted RBP17.42■□□□□ 0.38
HMGN3-203ENST00000620514 TRPM6Q9BX84 2022 aa17.42■□□□□ 0.38
HMGN3-203ENST00000620514 IGLON5A6NGN9 336 aa17.41■□□□□ 0.38
HMGN3-203ENST00000620514 EEF2KO00418 725 aaKnown RBP17.41■□□□□ 0.38
HMGN3-203ENST00000620514 INSIG1O15503 277 aa17.41■□□□□ 0.38
HMGN3-203ENST00000620514 MIPP30301 263 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms