RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, humanhuman

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-215ENST00000619322 HDCP19113 662 aa5.54□□□□□ -1.52
CBWD3-215ENST00000619322 NMT1P30419 496 aaKnown RBP5.54□□□□□ -1.52
CBWD3-215ENST00000619322 STAT1P42224 750 aa5.54□□□□□ -1.52
CBWD3-215ENST00000619322 AFMP43652 599 aa5.54□□□□□ -1.52
CBWD3-215ENST00000619322 ADKP55263 362 aaKnown RBP5.54□□□□□ -1.52
CBWD3-215ENST00000619322 JAM2P57087 298 aa5.54□□□□□ -1.52
CBWD3-215ENST00000619322 YWHAGP61981 247 aaKnown RBP eCLIP5.54□□□□□ -1.52
CBWD3-215ENST00000619322 GFPT1Q06210 699 aaPredicted RBP5.54□□□□□ -1.52
CBWD3-215ENST00000619322 SPAG1Q07617 926 aa5.54□□□□□ -1.52
CBWD3-215ENST00000619322 GRIK2Q13002 908 aa5.54□□□□□ -1.52
CBWD3-215ENST00000619322 KCNJ12Q14500 433 aa5.54□□□□□ -1.52
CBWD3-215ENST00000619322 ZRSR1Q15695 479 aaKnown RBP5.54□□□□□ -1.52
CBWD3-215ENST00000619322 ZNF699Q32M78 642 aa5.54□□□□□ -1.52
CBWD3-215ENST00000619322 BTBD8Q5XKL5 378 aa5.54□□□□□ -1.52
CBWD3-215ENST00000619322 ZNF572Q7Z3I7 529 aaPredicted RBP5.54□□□□□ -1.52
CBWD3-215ENST00000619322 PDZD3Q86UT5 571 aa5.54□□□□□ -1.52
CBWD3-215ENST00000619322 C12orf40Q86WS4 652 aa5.54□□□□□ -1.52
CBWD3-215ENST00000619322 OR5B17Q8NGF7 314 aa5.54□□□□□ -1.52
CBWD3-215ENST00000619322 UBASH3BQ8TF42 649 aa5.54□□□□□ -1.52
CBWD3-215ENST00000619322 SYN2Q92777 582 aaPredicted RBP5.54□□□□□ -1.52
CBWD3-215ENST00000619322 BARD1Q99728 777 aaKnown RBP5.54□□□□□ -1.52
CBWD3-215ENST00000619322 FAM107BQ9H098 131 aa5.54□□□□□ -1.52
CBWD3-215ENST00000619322 TSPYL1Q9H0U9 437 aa5.54□□□□□ -1.52
CBWD3-215ENST00000619322 BLZF1Q9H2G9 400 aa5.54□□□□□ -1.52
CBWD3-215ENST00000619322 PDFQ9HBH1 243 aa5.54□□□□□ -1.52
CBWD3-215ENST00000619322 GOLGA2P5Q9HBQ8 144 aa5.54□□□□□ -1.52
CBWD3-215ENST00000619322 PRSS16Q9NQE7 514 aa5.54□□□□□ -1.52
CBWD3-215ENST00000619322 ELOVL2Q9NXB9 296 aa5.54□□□□□ -1.52
CBWD3-215ENST00000619322 GGA2Q9UJY4 613 aa5.54□□□□□ -1.52
CBWD3-215ENST00000619322 CCL26Q9Y258 94 aa5.54□□□□□ -1.52
CBWD3-215ENST00000619322 A0A1B0GVM2 712 aa5.54□□□□□ -1.52
CBWD3-215ENST00000619322 TCAF2A6NFQ2 919 aa5.54□□□□□ -1.52
CBWD3-215ENST00000619322 SGK1O00141 431 aa5.54□□□□□ -1.52
CBWD3-215ENST00000619322 ENC1O14682 589 aa5.54□□□□□ -1.52
CBWD3-215ENST00000619322 HSF2BPO75031 334 aa5.54□□□□□ -1.52
CBWD3-215ENST00000619322 IVLP07476 585 aa5.54□□□□□ -1.52
CBWD3-215ENST00000619322 HNF1BP35680 557 aa5.54□□□□□ -1.52
CBWD3-215ENST00000619322 RABIFP47224 123 aa5.54□□□□□ -1.52
CBWD3-215ENST00000619322 YBEYP58557 167 aaPredicted RBP5.54□□□□□ -1.52
CBWD3-215ENST00000619322 OTUD1Q5VV17 481 aaPredicted RBP5.54□□□□□ -1.52
CBWD3-215ENST00000619322 CNGA4Q8IV77 575 aa5.54□□□□□ -1.52
CBWD3-215ENST00000619322 CSGALNACT2Q8N6G5 542 aa5.54□□□□□ -1.52
CBWD3-215ENST00000619322 GIMAP7Q8NHV1 300 aa5.54□□□□□ -1.52
CBWD3-215ENST00000619322 FEZF2Q8TBJ5 459 aa5.54□□□□□ -1.52
CBWD3-215ENST00000619322 NAT6Q93015 286 aa5.54□□□□□ -1.52
CBWD3-215ENST00000619322 ERGIC2Q96RQ1 377 aa5.54□□□□□ -1.52
CBWD3-215ENST00000619322 PSMB7Q99436 277 aa5.54□□□□□ -1.52
CBWD3-215ENST00000619322 CBWD1Q9BRT8 395 aa5.54□□□□□ -1.52
CBWD3-215ENST00000619322 MTMR12Q9C0I1 747 aa5.54□□□□□ -1.52
CBWD3-215ENST00000619322 APOBEC3GQ9HC16 384 aaKnown RBP5.54□□□□□ -1.52
CBWD3-215ENST00000619322 SYTL2Q9HCH5 934 aa5.54□□□□□ -1.52
CBWD3-215ENST00000619322 MYO1AQ9UBC5 1043 aa5.54□□□□□ -1.52
CBWD3-215ENST00000619322 C1QTNF9BB2RNN3 333 aa5.53□□□□□ -1.52
CBWD3-215ENST00000619322 PDE2AO00408 941 aaPredicted RBP5.53□□□□□ -1.52
CBWD3-215ENST00000619322 MCF2LO15068 1137 aa5.53□□□□□ -1.52
CBWD3-215ENST00000619322 NRDCO43847 1150 aa5.53□□□□□ -1.52
CBWD3-215ENST00000619322 KLF8O95600 359 aaPredicted RBP5.53□□□□□ -1.52
CBWD3-215ENST00000619322 FTH1P19P0C7X4 201 aa5.53□□□□□ -1.52
CBWD3-215ENST00000619322 CKMT2P17540 419 aa5.53□□□□□ -1.52
CBWD3-215ENST00000619322 CASP14P31944 242 aa5.53□□□□□ -1.52
CBWD3-215ENST00000619322 VIPR2P41587 438 aa5.53□□□□□ -1.52
CBWD3-215ENST00000619322 HADHBP55084 474 aaKnown RBP5.53□□□□□ -1.52
CBWD3-215ENST00000619322 FKBP3Q00688 224 aaKnown RBP5.53□□□□□ -1.52
CBWD3-215ENST00000619322 PTK2BQ14289 1009 aa5.53□□□□□ -1.52
CBWD3-215ENST00000619322 NAA25Q14CX7 972 aa5.53□□□□□ -1.52
CBWD3-215ENST00000619322 SETMARQ53H47 684 aaPredicted RBP5.53□□□□□ -1.52
CBWD3-215ENST00000619322 PCSK4Q6UW60 755 aa5.53□□□□□ -1.52
CBWD3-215ENST00000619322 GDPD4Q6W3E5 623 aa5.53□□□□□ -1.52
CBWD3-215ENST00000619322 MACC1Q6ZN28 852 aa5.53□□□□□ -1.52
CBWD3-215ENST00000619322 MMS22LQ6ZRQ5 1243 aa5.53□□□□□ -1.52
CBWD3-215ENST00000619322 SLC34A3Q8N130 599 aa5.53□□□□□ -1.52
CBWD3-215ENST00000619322 FBXO32Q969P5 355 aa5.53□□□□□ -1.52
CBWD3-215ENST00000619322 SLC35C1Q96A29 364 aa5.53□□□□□ -1.52
CBWD3-215ENST00000619322 TEFMQ96QE5 360 aaKnown RBP5.53□□□□□ -1.52
CBWD3-215ENST00000619322 ARRDC1-AS1Q9H2J1 176 aa5.53□□□□□ -1.52
CBWD3-215ENST00000619322 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.53□□□□□ -1.52
CBWD3-215ENST00000619322 SIK3Q9Y2K2 1263 aa5.53□□□□□ -1.52
CBWD3-215ENST00000619322 A0A1B0GVG6 124 aa5.53□□□□□ -1.52
CBWD3-215ENST00000619322 LRRC72A6NJI9 287 aa5.53□□□□□ -1.52
CBWD3-215ENST00000619322 GNB5O14775 395 aa5.53□□□□□ -1.52
CBWD3-215ENST00000619322 NVLO15381 856 aaKnown RBP5.53□□□□□ -1.52
CBWD3-215ENST00000619322 BCAT2O15382 392 aaPredicted RBP5.53□□□□□ -1.52
CBWD3-215ENST00000619322 FGF10O15520 208 aaPredicted RBP5.53□□□□□ -1.52
CBWD3-215ENST00000619322 CPNE3O75131 537 aaKnown RBP5.53□□□□□ -1.52
CBWD3-215ENST00000619322 SOCS5O75159 536 aa5.53□□□□□ -1.52
CBWD3-215ENST00000619322 DDAH2O95865 285 aa5.53□□□□□ -1.52
CBWD3-215ENST00000619322 ATP5BP06576 529 aaKnown RBP5.53□□□□□ -1.52
CBWD3-215ENST00000619322 GJA1P17302 382 aa5.53□□□□□ -1.52
CBWD3-215ENST00000619322 BCKDHBP21953 392 aa5.53□□□□□ -1.52
CBWD3-215ENST00000619322 HNRNPH1P31943 449 aaKnown RBP5.53□□□□□ -1.52
CBWD3-215ENST00000619322 MAN1A1P33908 653 aa5.53□□□□□ -1.52
CBWD3-215ENST00000619322 GPD2P43304 727 aa5.53□□□□□ -1.52
CBWD3-215ENST00000619322 NDST2P52849 883 aa5.53□□□□□ -1.52
CBWD3-215ENST00000619322 TMPRSS3P57727 454 aa5.53□□□□□ -1.52
CBWD3-215ENST00000619322 DMPKQ09013 629 aa5.53□□□□□ -1.52
CBWD3-215ENST00000619322 HYAL2Q12891 473 aa5.53□□□□□ -1.52
CBWD3-215ENST00000619322 ILF2Q12905 390 aaKnown RBP5.53□□□□□ -1.52
CBWD3-215ENST00000619322 TAF10Q12962 218 aa5.53□□□□□ -1.52
CBWD3-215ENST00000619322 TUBB2AQ13885 445 aa5.53□□□□□ -1.52
CBWD3-215ENST00000619322 STARD3Q14849 445 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms