RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 DENND4CQ5VZ89 1909 aa12.88□□□□□ -0.35
TNFAIP3-209ENST00000619035 TYW5A2RUC4 315 aaKnown RBP12.88□□□□□ -0.35
TNFAIP3-209ENST00000619035 PER2O15055 1255 aa12.88□□□□□ -0.35
TNFAIP3-209ENST00000619035 KRT37O76014 449 aa12.88□□□□□ -0.35
TNFAIP3-209ENST00000619035 ALDH1A2O94788 518 aa12.88□□□□□ -0.35
TNFAIP3-209ENST00000619035 EPCAMP16422 314 aa12.88□□□□□ -0.35
TNFAIP3-209ENST00000619035 CCR2P41597 374 aa12.88□□□□□ -0.35
TNFAIP3-209ENST00000619035 MPP3Q13368 585 aa12.88□□□□□ -0.35
TNFAIP3-209ENST00000619035 ANKRD20A4Q4UJ75 823 aa12.88□□□□□ -0.35
TNFAIP3-209ENST00000619035 ZNF697Q5TEC3 545 aa12.88□□□□□ -0.35
TNFAIP3-209ENST00000619035 RBM23Q86U06 439 aaKnown RBP12.88□□□□□ -0.35
TNFAIP3-209ENST00000619035 CNPY4Q8N129 248 aa12.88□□□□□ -0.35
TNFAIP3-209ENST00000619035 TEX26Q8N6G2 289 aa12.88□□□□□ -0.35
TNFAIP3-209ENST00000619035 ANKS4BQ8N8V4 417 aa12.88□□□□□ -0.35
TNFAIP3-209ENST00000619035 TTC17Q96AE7 1141 aa12.88□□□□□ -0.35
TNFAIP3-209ENST00000619035 IMP4Q96G21 291 aaKnown RBP12.88□□□□□ -0.35
TNFAIP3-209ENST00000619035 CERS2Q96G23 380 aa12.88□□□□□ -0.35
TNFAIP3-209ENST00000619035 PITPNM3Q9BZ71 974 aa12.88□□□□□ -0.35
TNFAIP3-209ENST00000619035 CERS4Q9HA82 394 aa12.88□□□□□ -0.35
TNFAIP3-209ENST00000619035 USP15Q9Y4E8 981 aaPredicted RBP12.88□□□□□ -0.35
TNFAIP3-209ENST00000619035 CAPN7Q9Y6W3 813 aa12.88□□□□□ -0.35
TNFAIP3-209ENST00000619035 CCT8L1PA6NM43 557 aa12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 MUSKO15146 869 aa12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 GREM1O60565 184 aa12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 ADRA1AP35348 466 aa12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 MAGEA9P43362 315 aa12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 TNK2Q07912 1038 aa12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 CAMK1Q14012 370 aa12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 SEPT6Q14141 434 aa12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 LGSNQ5TDP6 509 aa12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 MROH9Q5TGP6 573 aa12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 CDHR3Q6ZTQ4 885 aa12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 CHST9Q7L1S5 443 aa12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 SPATA21Q7Z572 469 aa12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 YTHDF3Q7Z739 585 aaKnown RBP12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 LEMD2Q8NC56 503 aa12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 TCEAL4Q96EI5 215 aa12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 TMA16Q96EY4 203 aaKnown RBP12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 ZNF778Q96MU6 729 aa12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 SEMA3CQ99985 751 aa12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 POLR1EQ9GZS1 481 aaKnown RBP12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 PDFQ9HBH1 243 aa12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 ZNF510Q9Y2H8 683 aa12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 ATXN2Q99700 1313 aaKnown RBP12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 CDH23Q9H251 3354 aa12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 ILVBLA1L0T0 632 aa12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 KRT38O76015 456 aa12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 USP1O94782 785 aa12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 TOP3BO95985 862 aaKnown RBP12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 SNRPAP09012 282 aaKnown RBP12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 POU2F2P09086 479 aa12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 DDX6P26196 483 aaKnown RBP eCLIP12.87□□□□□ -0.352e-8■■■□□ 17.7
TNFAIP3-209ENST00000619035 NMBRP28336 390 aa12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 SLC7A9P82251 487 aa12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 MGAT5Q09328 741 aa12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 CDH18Q13634 790 aa12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 FSCBQ5H9T9 825 aa12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 GPR158Q5T848 1215 aa12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 DENND5AQ6IQ26 1287 aa12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 CXorf57Q6NSI4 855 aaKnown RBP12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 ELMSAN1Q6PJG2 1045 aa12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 KDELC1Q6UW63 502 aa12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 Q6ZNB5 142 aa12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 SH2D5Q6ZV89 423 aa12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 CYS1Q717R9 158 aa12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 SETD3Q86TU7 594 aaPredicted RBP12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 TMEM135Q86UB9 458 aa12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 BBS7Q8IWZ6 715 aa12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 HJURPQ8NCD3 748 aaPredicted RBP12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 EXOC2Q96KP1 924 aa12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 RMDN2Q96LZ7 410 aa12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 FAM111AQ96PZ2 611 aa12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 SLC46A2Q9BY10 475 aa12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 TXNDC16Q9P2K2 825 aa12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 UBA2Q9UBT2 640 aaPredicted RBP12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 ZMYM5Q9UJ78 669 aa12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 ZNF180Q9UJW8 692 aa12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 SOX13Q9UN79 622 aa12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 PSAT1Q9Y617 370 aa12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 MYO7AQ13402 2215 aa12.87□□□□□ -0.35
TNFAIP3-209ENST00000619035 ZCWPW2A0A1B0GU75 182 aa12.86□□□□□ -0.35
TNFAIP3-209ENST00000619035 FAM237BA0A1B0GVD1 139 aa12.86□□□□□ -0.35
TNFAIP3-209ENST00000619035 MAGEB16A2A368 324 aa12.86□□□□□ -0.35
TNFAIP3-209ENST00000619035 HMX2A2RU54 273 aa12.86□□□□□ -0.35
TNFAIP3-209ENST00000619035 GOLGA8TH3BQL2 631 aa12.86□□□□□ -0.35
TNFAIP3-209ENST00000619035 MMP2P08253 660 aa12.86□□□□□ -0.35
TNFAIP3-209ENST00000619035 HNRNPA1P09651 372 aaKnown RBP eCLIP12.86□□□□□ -0.35
TNFAIP3-209ENST00000619035 EPHA5P54756 1037 aa12.86□□□□□ -0.35
TNFAIP3-209ENST00000619035 ITIH4Q14624 930 aa12.86□□□□□ -0.35
TNFAIP3-209ENST00000619035 SEPT7Q16181 437 aaKnown RBP12.86□□□□□ -0.35
TNFAIP3-209ENST00000619035 PDK4Q16654 411 aa12.86□□□□□ -0.35
TNFAIP3-209ENST00000619035 ARMC3Q5W041 872 aa12.86□□□□□ -0.35
TNFAIP3-209ENST00000619035 TPGS1Q6ZTW0 290 aa12.86□□□□□ -0.35
TNFAIP3-209ENST00000619035 RNF135Q8IUD6 432 aa12.86□□□□□ -0.35
TNFAIP3-209ENST00000619035 BBS5Q8N3I7 341 aa12.86□□□□□ -0.35
TNFAIP3-209ENST00000619035 CCDC63Q8NA47 563 aa12.86□□□□□ -0.35
TNFAIP3-209ENST00000619035 PPHLN1Q8NEY8 458 aaKnown RBP12.86□□□□□ -0.35
TNFAIP3-209ENST00000619035 SHKBP1Q8TBC3 707 aa12.86□□□□□ -0.35
TNFAIP3-209ENST00000619035 DDI1Q8WTU0 396 aa12.86□□□□□ -0.35
TNFAIP3-209ENST00000619035 CINPQ9BW66 212 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms