RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 DNAJC1Q96KC8 554 aaKnown RBP7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 TBCBQ99426 244 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 RTKNQ9BST9 563 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 CAAP1Q9H8G2 361 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 EFCAB1Q9HAE3 211 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 TIMMDC1Q9NPL8 285 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 MAN1C1Q9NR34 630 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 ARHGEF4Q9NR80 690 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 C20orf96Q9NUD7 363 aaPredicted RBP7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 ZDHHC7Q9NXF8 308 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 ADAMTS6Q9UKP5 1117 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 RAB26Q9ULW5 256 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 MAGED2Q9UNF1 606 aaPredicted RBP7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 ZNF711Q9Y462 761 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 SQORQ9Y6N5 450 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 RPS6KL1Q9Y6S9 549 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 CITO14578 2027 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 ITM2AO43736 263 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 PEX1O43933 1283 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 OR6B1O95007 311 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 LCP1P13796 627 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 CYP2F1P24903 491 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 RPL9P32969 192 aaKnown RBP7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 GP5P40197 560 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 KLF10Q13118 480 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 HNRNPDQ14103 355 aaKnown RBP7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 DSC3Q14574 896 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 VWA5B1Q5TIE3 1220 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 MRPL10Q7Z7H8 261 aaKnown RBP7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 FAM126BQ8IXS8 530 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 PTCD2Q8WV60 388 aaKnown RBP7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 TFB1MQ8WVM0 346 aaKnown RBP7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 DLG3Q92796 817 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 USP13Q92995 863 aaPredicted RBP7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 HAPLN3Q96S86 360 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 WDR83Q9BRX9 315 aaKnown RBP7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 FTHL17Q9BXU8 183 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 PAK6Q9NQU5 681 aaPredicted RBP7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 PRDM5Q9NQX1 630 aaPredicted RBP7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 GDAP2Q9NXN4 497 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 KLHL8Q9P2G9 620 aaPredicted RBP7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 CIDEBQ9UHD4 219 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 CDYLQ9Y232 598 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 ARHGEF37A1IGU5 675 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 SNNO75324 88 aaPredicted RBP7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 H2AFYO75367 372 aaKnown RBP7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 ITGAXP20702 1163 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 ME2P23368 584 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 CYP2C18P33260 490 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 TIE1P35590 1138 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 GPD2P43304 727 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 SLC12A2P55011 1212 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 NAB1Q13506 487 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 CCNIQ14094 377 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 TEX44Q53QW1 395 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 NOMO2Q5JPE7 1267 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 PACS1Q6VY07 963 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 PDZD4Q76G19 769 aaPredicted RBP7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 LPCAT2Q7L5N7 544 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 RTN4RL1Q86UN2 441 aaPredicted RBP7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 SCUBE3Q8IX30 993 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 TOP6BLQ8N6T0 577 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 RNF148Q8N7C7 305 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 CCNYL1Q8N7R7 359 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 SLC43A3Q8NBI5 491 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 BHLHE22Q8NFJ8 381 aaPredicted RBP7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 EDEM1Q92611 657 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 FAM149B1Q96BN6 582 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 LRRC4Q9HBW1 653 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 TMEM39AQ9NV64 488 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 CYTH4Q9UIA0 394 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 SIP14410 1827 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 SYNJ2BP-COX16A0A087WUM0 186 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 BCLAF3A2AJT9 711 aaKnown RBP7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 C3orf70A6NLC5 250 aaPredicted RBP7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 PDLIM1O00151 329 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 CLDN5O00501 218 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 TRIM13O60858 407 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 TADA2AO75478 443 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 EOMESO95936 686 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 PTPN1P18031 435 aaKnown RBP7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 PGAM1P18669 254 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 VAMP1P23763 118 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 PRDX6P30041 224 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 CDH5P33151 784 aaPredicted RBP7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 LHX1P48742 406 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 PKNOX1P55347 436 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 CRADDP78560 199 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 ITKQ08881 620 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 TRIM60Q495X7 471 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 NADK2Q4G0N4 442 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 TIGD5Q53EQ6 642 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 FAM182AQ5T1J6 154 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 TEDDM1Q5T9Z0 273 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 KCNT2Q6UVM3 1135 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 CTU1Q7Z7A3 348 aaKnown RBP7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 OSTM1Q86WC4 334 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 B3GALNT2Q8NCR0 500 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 ADCY4Q8NFM4 1077 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 KBTBD7Q8WVZ9 684 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms