RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 POLD3Q15054 466 aaPredicted RBP12.57□□□□□ -0.4
CIITA-212ENST00000618207 PDPK2PQ6A1A2 396 aa12.57□□□□□ -0.4
CIITA-212ENST00000618207 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.57□□□□□ -0.4
CIITA-212ENST00000618207 BEND5Q7L4P6 421 aa12.57□□□□□ -0.4
CIITA-212ENST00000618207 ARMCX6Q7L4S7 300 aa12.57□□□□□ -0.4
CIITA-212ENST00000618207 CEP97Q8IW35 865 aa12.57□□□□□ -0.4
CIITA-212ENST00000618207 FAM126BQ8IXS8 530 aa12.57□□□□□ -0.4
CIITA-212ENST00000618207 LGI2Q8N0V4 545 aa12.57□□□□□ -0.4
CIITA-212ENST00000618207 OR6P1Q8NGX9 317 aa12.57□□□□□ -0.4
CIITA-212ENST00000618207 PXYLP1Q8TE99 480 aa12.57□□□□□ -0.4
CIITA-212ENST00000618207 SEPT8Q92599 483 aa12.57□□□□□ -0.4
CIITA-212ENST00000618207 ELMO2Q96JJ3 720 aa12.57□□□□□ -0.4
CIITA-212ENST00000618207 SPON2Q9BUD6 331 aa12.57□□□□□ -0.4
CIITA-212ENST00000618207 KIFC1Q9BW19 673 aa12.57□□□□□ -0.4
CIITA-212ENST00000618207 WWP1Q9H0M0 922 aa12.57□□□□□ -0.4
CIITA-212ENST00000618207 KCNK4Q9NYG8 393 aa12.57□□□□□ -0.4
CIITA-212ENST00000618207 PATJQ8NI35 1801 aa12.56□□□□□ -0.4
CIITA-212ENST00000618207 MEI4A8MW99 385 aa12.56□□□□□ -0.4
CIITA-212ENST00000618207 B2RBV5 119 aa12.56□□□□□ -0.4
CIITA-212ENST00000618207 TIMM44O43615 452 aa12.56□□□□□ -0.4
CIITA-212ENST00000618207 GJB5O95377 273 aa12.56□□□□□ -0.4
CIITA-212ENST00000618207 HSPA4LO95757 839 aa12.56□□□□□ -0.4
CIITA-212ENST00000618207 SERPINE1P05121 402 aa12.56□□□□□ -0.4
CIITA-212ENST00000618207 CHRNGP07510 517 aa12.56□□□□□ -0.4
CIITA-212ENST00000618207 ATF6P18850 670 aa12.56□□□□□ -0.4
CIITA-212ENST00000618207 NCF2P19878 526 aaPredicted RBP12.56□□□□□ -0.4
CIITA-212ENST00000618207 NAB1Q13506 487 aa12.56□□□□□ -0.4
CIITA-212ENST00000618207 BFSP2Q13515 415 aa12.56□□□□□ -0.4
CIITA-212ENST00000618207 C1QTNF12Q5T7M4 302 aa12.56□□□□□ -0.4
CIITA-212ENST00000618207 KIAA1841Q6NSI8 718 aa12.56□□□□□ -0.4
CIITA-212ENST00000618207 DNAJC14Q6Y2X3 702 aaPredicted RBP12.56□□□□□ -0.4
CIITA-212ENST00000618207 ZNF781Q8N8C0 355 aa12.56□□□□□ -0.4
CIITA-212ENST00000618207 BTN2A3PQ96KV6 586 aa12.56□□□□□ -0.4
CIITA-212ENST00000618207 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.56□□□□□ -0.4
CIITA-212ENST00000618207 GKN1Q9NS71 199 aa12.56□□□□□ -0.4
CIITA-212ENST00000618207 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.56□□□□□ -0.4
CIITA-212ENST00000618207 TAS2R1Q9NYW7 299 aa12.56□□□□□ -0.4
CIITA-212ENST00000618207 UXTQ9UBK9 157 aaPredicted RBP12.56□□□□□ -0.4
CIITA-212ENST00000618207 NKX1-2Q9UD57 310 aaPredicted RBP12.56□□□□□ -0.4
CIITA-212ENST00000618207 GOLGA8QA0A0J9YX86 632 aa12.56□□□□□ -0.4
CIITA-212ENST00000618207 GOLGA8OA6NCC3 632 aa12.56□□□□□ -0.4
CIITA-212ENST00000618207 GOLGA8NF8WBI6 632 aa12.56□□□□□ -0.4
CIITA-212ENST00000618207 RAMP2O60895 175 aa12.56□□□□□ -0.4
CIITA-212ENST00000618207 SLC2A3P11169 496 aa12.56□□□□□ -0.4
CIITA-212ENST00000618207 RENBPP51606 427 aa12.56□□□□□ -0.4
CIITA-212ENST00000618207 SESN3P58005 492 aa12.56□□□□□ -0.4
CIITA-212ENST00000618207 PEX6Q13608 980 aa12.56□□□□□ -0.4
CIITA-212ENST00000618207 ANO4Q32M45 955 aa12.56□□□□□ -0.4
CIITA-212ENST00000618207 CNSTQ6PJW8 725 aa12.56□□□□□ -0.4
CIITA-212ENST00000618207 MFSD6LQ8IWD5 586 aa12.56□□□□□ -0.4
CIITA-212ENST00000618207 SLC43A3Q8NBI5 491 aa12.56□□□□□ -0.4
CIITA-212ENST00000618207 FBXO22Q8NEZ5 403 aa12.56□□□□□ -0.4
CIITA-212ENST00000618207 SORT1Q99523 831 aa12.56□□□□□ -0.4
CIITA-212ENST00000618207 TSEN34Q9BSV6 310 aaKnown RBP12.56□□□□□ -0.4
CIITA-212ENST00000618207 TTPALQ9BTX7 342 aa12.56□□□□□ -0.4
CIITA-212ENST00000618207 DENND2DQ9H6A0 471 aaPredicted RBP12.56□□□□□ -0.4
CIITA-212ENST00000618207 SUDS3Q9H7L9 328 aaPredicted RBP12.56□□□□□ -0.4
CIITA-212ENST00000618207 ENTPD7Q9NQZ7 604 aa12.56□□□□□ -0.4
CIITA-212ENST00000618207 FNDC3AQ9Y2H6 1198 aaKnown RBP12.56□□□□□ -0.4
CIITA-212ENST00000618207 FIS1Q9Y3D6 152 aa12.56□□□□□ -0.4
CIITA-212ENST00000618207 TCAF1Q9Y4C2 921 aa12.56□□□□□ -0.4
CIITA-212ENST00000618207 FAM95CA0A1B0GW59 222 aa12.55□□□□□ -0.4
CIITA-212ENST00000618207 NEMP1O14524 444 aa12.55□□□□□ -0.4
CIITA-212ENST00000618207 CCDC22O60826 627 aa12.55□□□□□ -0.4
CIITA-212ENST00000618207 RHOQP17081 205 aa12.55□□□□□ -0.4
CIITA-212ENST00000618207 FGFR3P22607 806 aa12.55□□□□□ -0.4
CIITA-212ENST00000618207 ALDH7A1P49419 539 aaKnown RBP12.55□□□□□ -0.4
CIITA-212ENST00000618207 ABCE1P61221 599 aaKnown RBP12.55□□□□□ -0.4
CIITA-212ENST00000618207 GPR17Q13304 367 aa12.55□□□□□ -0.4
CIITA-212ENST00000618207 RBM20Q5T481 1227 aaKnown RBP12.55□□□□□ -0.4
CIITA-212ENST00000618207 NADSYN1Q6IA69 706 aa12.55□□□□□ -0.4
CIITA-212ENST00000618207 RANBP10Q6VN20 620 aa12.55□□□□□ -0.4
CIITA-212ENST00000618207 NPAS4Q8IUM7 802 aa12.55□□□□□ -0.4
CIITA-212ENST00000618207 OR7D4Q8NG98 312 aa12.55□□□□□ -0.4
CIITA-212ENST00000618207 INPP5DQ92835 1189 aa12.55□□□□□ -0.4
CIITA-212ENST00000618207 NXNL1Q96CM4 212 aa12.55□□□□□ -0.4
CIITA-212ENST00000618207 PTCD3Q96EY7 689 aaKnown RBP12.55□□□□□ -0.4
CIITA-212ENST00000618207 CLPTM1LQ96KA5 538 aa12.55□□□□□ -0.4
CIITA-212ENST00000618207 MTF2Q9Y483 593 aaPredicted RBP12.55□□□□□ -0.4
CIITA-212ENST00000618207 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.55□□□□□ -0.4
CIITA-212ENST00000618207 LOC100653049A0A140TA62 436 aa12.55□□□□□ -0.4
CIITA-212ENST00000618207 OR6C75A6NL08 312 aa12.55□□□□□ -0.4
CIITA-212ENST00000618207 TSPAN3O60637 253 aa12.55□□□□□ -0.4
CIITA-212ENST00000618207 KRT34O76011 436 aa12.55□□□□□ -0.4
CIITA-212ENST00000618207 PEX11BO96011 259 aa12.55□□□□□ -0.4
CIITA-212ENST00000618207 GLDCP23378 1020 aa12.55□□□□□ -0.4
CIITA-212ENST00000618207 PAX3P23760 479 aa12.55□□□□□ -0.4
CIITA-212ENST00000618207 DNAJB2P25686 324 aa12.55□□□□□ -0.4
CIITA-212ENST00000618207 CA8P35219 290 aa12.55□□□□□ -0.4
CIITA-212ENST00000618207 ADRA1AP35348 466 aa12.55□□□□□ -0.4
CIITA-212ENST00000618207 RPS24P62847 133 aaKnown RBP12.55□□□□□ -0.4
CIITA-212ENST00000618207 MRPL58Q14197 206 aaKnown RBP12.55□□□□□ -0.4
CIITA-212ENST00000618207 GALNT3Q14435 633 aa12.55□□□□□ -0.4
CIITA-212ENST00000618207 TRIP4Q15650 581 aaPredicted RBP12.55□□□□□ -0.4
CIITA-212ENST00000618207 CFAP157Q5JU67 520 aa12.55□□□□□ -0.4
CIITA-212ENST00000618207 FAM219BQ5XKK7 198 aa12.55□□□□□ -0.4
CIITA-212ENST00000618207 IL31Q6EBC2 164 aa12.55□□□□□ -0.4
CIITA-212ENST00000618207 MSANTD2Q6P1R3 559 aa12.55□□□□□ -0.4
CIITA-212ENST00000618207 MAVSQ7Z434 540 aa12.55□□□□□ -0.4
CIITA-212ENST00000618207 DENND1CQ8IV53 801 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms