RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 RPS24P62847 133 aaKnown RBP17.03■□□□□ 0.32
TRAPPC3-210ENST00000617904 GABPB1Q06547 395 aaPredicted RBP17.03■□□□□ 0.32
TRAPPC3-210ENST00000617904 TDGQ13569 410 aa17.03■□□□□ 0.32
TRAPPC3-210ENST00000617904 SLC14A2Q15849 920 aa17.03■□□□□ 0.32
TRAPPC3-210ENST00000617904 SPANXN3Q5MJ09 141 aa17.03■□□□□ 0.32
TRAPPC3-210ENST00000617904 HP1BP3Q5SSJ5 553 aaPredicted RBP17.03■□□□□ 0.32
TRAPPC3-210ENST00000617904 SYCP2LQ5T4T6 812 aa17.03■□□□□ 0.32
TRAPPC3-210ENST00000617904 RNF219Q5W0B1 726 aaPredicted RBP17.03■□□□□ 0.32
TRAPPC3-210ENST00000617904 CWF19L1Q69YN2 538 aaKnown RBP17.03■□□□□ 0.32
TRAPPC3-210ENST00000617904 ZNF449Q6P9G9 518 aa17.03■□□□□ 0.32
TRAPPC3-210ENST00000617904 CYS1Q717R9 158 aa17.03■□□□□ 0.32
TRAPPC3-210ENST00000617904 CIR1Q86X95 450 aaPredicted RBP17.03■□□□□ 0.32
TRAPPC3-210ENST00000617904 MFN1Q8IWA4 741 aa17.03■□□□□ 0.32
TRAPPC3-210ENST00000617904 TEX26Q8N6G2 289 aa17.03■□□□□ 0.32
TRAPPC3-210ENST00000617904 SH3RF2Q8TEC5 729 aa17.03■□□□□ 0.32
TRAPPC3-210ENST00000617904 FBF1Q8TES7 1133 aa17.03■□□□□ 0.32
TRAPPC3-210ENST00000617904 PTCD2Q8WV60 388 aaKnown RBP17.03■□□□□ 0.32
TRAPPC3-210ENST00000617904 TBL1YQ9BQ87 522 aa17.03■□□□□ 0.32
TRAPPC3-210ENST00000617904 SLC46A2Q9BY10 475 aa17.03■□□□□ 0.32
TRAPPC3-210ENST00000617904 NOL6Q9H6R4 1146 aaKnown RBP17.03■□□□□ 0.32
TRAPPC3-210ENST00000617904 KCNK12Q9HB15 430 aa17.03■□□□□ 0.32
TRAPPC3-210ENST00000617904 KIAA1522Q9P206 1035 aaPredicted RBP17.03■□□□□ 0.32
TRAPPC3-210ENST00000617904 TXNDC16Q9P2K2 825 aa17.03■□□□□ 0.32
TRAPPC3-210ENST00000617904 IQANK1A0A1B0GTG1 560 aa17.02■□□□□ 0.32
TRAPPC3-210ENST00000617904 CXorf51AA0A1B0GTR3 108 aa17.02■□□□□ 0.32
TRAPPC3-210ENST00000617904 PROB1E7EW31 1015 aa17.02■□□□□ 0.32
TRAPPC3-210ENST00000617904 PAMP19021 973 aa17.02■□□□□ 0.32
TRAPPC3-210ENST00000617904 TEAD2Q15562 447 aa17.02■□□□□ 0.32
TRAPPC3-210ENST00000617904 LONRF1Q17RB8 773 aa17.02■□□□□ 0.32
TRAPPC3-210ENST00000617904 KCTD16Q68DU8 428 aa17.02■□□□□ 0.32
TRAPPC3-210ENST00000617904 POTEHQ6S545 545 aa17.02■□□□□ 0.32
TRAPPC3-210ENST00000617904 ARHGAP36Q6ZRI8 547 aa17.02■□□□□ 0.32
TRAPPC3-210ENST00000617904 CAPN12Q6ZSI9 719 aa17.02■□□□□ 0.32
TRAPPC3-210ENST00000617904 GRASPQ7Z6J2 395 aaPredicted RBP17.02■□□□□ 0.32
TRAPPC3-210ENST00000617904 PPHLN1Q8NEY8 458 aaKnown RBP17.02■□□□□ 0.32
TRAPPC3-210ENST00000617904 EPS8L3Q8TE67 593 aaKnown RBP17.02■□□□□ 0.32
TRAPPC3-210ENST00000617904 USP13Q92995 863 aaPredicted RBP17.02■□□□□ 0.32
TRAPPC3-210ENST00000617904 ARL8AQ96BM9 186 aa17.02■□□□□ 0.32
TRAPPC3-210ENST00000617904 ZNF707Q96C28 371 aaPredicted RBP17.02■□□□□ 0.32
TRAPPC3-210ENST00000617904 IFT43Q96FT9 208 aa17.02■□□□□ 0.32
TRAPPC3-210ENST00000617904 PRICKLE1Q96MT3 831 aaPredicted RBP17.02■□□□□ 0.32
TRAPPC3-210ENST00000617904 MFSD1Q9H3U5 465 aa17.02■□□□□ 0.32
TRAPPC3-210ENST00000617904 CASS4Q9NQ75 786 aa17.02■□□□□ 0.32
TRAPPC3-210ENST00000617904 HCFC1R1Q9NWW0 138 aa17.02■□□□□ 0.32
TRAPPC3-210ENST00000617904 ZNF212Q9UDV6 495 aa17.02■□□□□ 0.32
TRAPPC3-210ENST00000617904 LGALS13Q9UHV8 139 aa17.02■□□□□ 0.32
TRAPPC3-210ENST00000617904 VPS28Q9UK41 221 aa17.02■□□□□ 0.32
TRAPPC3-210ENST00000617904 DUSP12Q9UNI6 340 aa17.02■□□□□ 0.32
TRAPPC3-210ENST00000617904 FAM169AQ9Y6X4 670 aa17.02■□□□□ 0.32
TRAPPC3-210ENST00000617904 MTCL1Q9Y4B5 1905 aaKnown RBP17.02■□□□□ 0.31
TRAPPC3-210ENST00000617904 F5H423 210 aaPredicted RBP17.01■□□□□ 0.31
TRAPPC3-210ENST00000617904 J3KR12 359 aa17.01■□□□□ 0.31
TRAPPC3-210ENST00000617904 KRT37O76014 449 aa17.01■□□□□ 0.31
TRAPPC3-210ENST00000617904 HLA-DQB2P05538 268 aa17.01■□□□□ 0.31
TRAPPC3-210ENST00000617904 SERPINF2P08697 491 aa17.01■□□□□ 0.31
TRAPPC3-210ENST00000617904 KRT15P19012 456 aa17.01■□□□□ 0.31
TRAPPC3-210ENST00000617904 WEE1P30291 646 aa17.01■□□□□ 0.31
TRAPPC3-210ENST00000617904 SSTR1P30872 391 aa17.01■□□□□ 0.31
TRAPPC3-210ENST00000617904 CD68P34810 354 aaPredicted RBP17.01■□□□□ 0.31
TRAPPC3-210ENST00000617904 SLCO1A2P46721 670 aa17.01■□□□□ 0.31
TRAPPC3-210ENST00000617904 SERPINB9P50453 376 aa17.01■□□□□ 0.31
TRAPPC3-210ENST00000617904 IRAK1P51617 712 aa17.01■□□□□ 0.31
TRAPPC3-210ENST00000617904 SLC20A2Q08357 652 aa17.01■□□□□ 0.31
TRAPPC3-210ENST00000617904 FASTKD3Q14CZ7 662 aaKnown RBP17.01■□□□□ 0.31
TRAPPC3-210ENST00000617904 MSS51Q4VC12 460 aa17.01■□□□□ 0.31
TRAPPC3-210ENST00000617904 TTMPQ5BVD1 217 aa17.01■□□□□ 0.31
TRAPPC3-210ENST00000617904 RALGPS1Q5JS13 557 aa17.01■□□□□ 0.31
TRAPPC3-210ENST00000617904 KCTD11Q693B1 232 aa17.01■□□□□ 0.31
TRAPPC3-210ENST00000617904 KDM7AQ6ZMT4 941 aa17.01■□□□□ 0.31
TRAPPC3-210ENST00000617904 KLHDC8BQ8IXV7 354 aa17.01■□□□□ 0.31
TRAPPC3-210ENST00000617904 CELF5Q8N6W0 485 aaKnown RBP17.01■□□□□ 0.31
TRAPPC3-210ENST00000617904 CNTD1Q8N815 330 aa17.01■□□□□ 0.31
TRAPPC3-210ENST00000617904 IPMKQ8NFU5 416 aa17.01■□□□□ 0.31
TRAPPC3-210ENST00000617904 ACDQ96AP0 544 aa17.01■□□□□ 0.31
TRAPPC3-210ENST00000617904 SIGLEC10Q96LC7 697 aa17.01■□□□□ 0.31
TRAPPC3-210ENST00000617904 SLC22A12Q96S37 553 aa17.01■□□□□ 0.31
TRAPPC3-210ENST00000617904 NSMCE4AQ9NXX6 385 aa17.01■□□□□ 0.31
TRAPPC3-210ENST00000617904 ACTL7BQ9Y614 415 aa17.01■□□□□ 0.31
TRAPPC3-210ENST00000617904 CBX4O00257 560 aa17■□□□□ 0.31
TRAPPC3-210ENST00000617904 AVILO75366 819 aa17■□□□□ 0.31
TRAPPC3-210ENST00000617904 KRT38O76015 456 aa17■□□□□ 0.31
TRAPPC3-210ENST00000617904 GJA1P17302 382 aa17■□□□□ 0.31
TRAPPC3-210ENST00000617904 CNTFP26441 200 aa17■□□□□ 0.31
TRAPPC3-210ENST00000617904 MGAT1P26572 445 aa17■□□□□ 0.31
TRAPPC3-210ENST00000617904 MAPK8P45983 427 aa17■□□□□ 0.31
TRAPPC3-210ENST00000617904 MAGOHP61326 146 aaKnown RBP17■□□□□ 0.31
TRAPPC3-210ENST00000617904 PPP2R2AP63151 447 aa17■□□□□ 0.31
TRAPPC3-210ENST00000617904 ILF2Q12905 390 aaKnown RBP17■□□□□ 0.31
TRAPPC3-210ENST00000617904 INO80DQ53TQ3 878 aaPredicted RBP17■□□□□ 0.31
TRAPPC3-210ENST00000617904 PCID2Q5JVF3 399 aa17■□□□□ 0.31
TRAPPC3-210ENST00000617904 LRRC6Q86X45 466 aa17■□□□□ 0.31
TRAPPC3-210ENST00000617904 DCAF4L2Q8NA75 395 aa17■□□□□ 0.31
TRAPPC3-210ENST00000617904 FLCNQ8NFG4 579 aa17■□□□□ 0.31
TRAPPC3-210ENST00000617904 OR52K1Q8NGK4 314 aa17■□□□□ 0.31
TRAPPC3-210ENST00000617904 TTC17Q96AE7 1141 aa17■□□□□ 0.31
TRAPPC3-210ENST00000617904 IMP4Q96G21 291 aaKnown RBP17■□□□□ 0.31
TRAPPC3-210ENST00000617904 XPO6Q96QU8 1125 aaKnown RBP17■□□□□ 0.31
TRAPPC3-210ENST00000617904 MYADMQ96S97 322 aa17■□□□□ 0.31
TRAPPC3-210ENST00000617904 ACE2Q9BYF1 805 aaPredicted RBP17■□□□□ 0.31
TRAPPC3-210ENST00000617904 RABGEF1Q9UJ41 708 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms