RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 ISL2Q96A47 359 aa17.56■□□□□ 0.4
PCDHGC3-205ENST00000617641 VPS39Q96JC1 886 aa17.56■□□□□ 0.4
PCDHGC3-205ENST00000617641 CYP2S1Q96SQ9 504 aa17.56■□□□□ 0.4
PCDHGC3-205ENST00000617641 RXFP1Q9HBX9 757 aa17.56■□□□□ 0.4
PCDHGC3-205ENST00000617641 ARNT2Q9HBZ2 717 aa17.56■□□□□ 0.4
PCDHGC3-205ENST00000617641 MRM3Q9HC36 420 aaKnown RBP17.56■□□□□ 0.4
PCDHGC3-205ENST00000617641 TRPC7Q9HCX4 862 aa17.56■□□□□ 0.4
PCDHGC3-205ENST00000617641 HAUS2Q9NVX0 235 aa17.56■□□□□ 0.4
PCDHGC3-205ENST00000617641 UXTQ9UBK9 157 aaPredicted RBP17.56■□□□□ 0.4
PCDHGC3-205ENST00000617641 USH1CQ9Y6N9 552 aa17.56■□□□□ 0.4
PCDHGC3-205ENST00000617641 KLF11O14901 512 aa17.55■□□□□ 0.4
PCDHGC3-205ENST00000617641 TROVE2P10155 538 aaKnown RBP eCLIP17.55■□□□□ 0.4
PCDHGC3-205ENST00000617641 ARCN1P48444 511 aaKnown RBP17.55■□□□□ 0.4
PCDHGC3-205ENST00000617641 ZNF235Q14590 738 aa17.55■□□□□ 0.4
PCDHGC3-205ENST00000617641 DLG2Q15700 870 aa17.55■□□□□ 0.4
PCDHGC3-205ENST00000617641 IL31Q6EBC2 164 aa17.55■□□□□ 0.4
PCDHGC3-205ENST00000617641 E2F7Q96AV8 911 aa17.55■□□□□ 0.4
PCDHGC3-205ENST00000617641 TADA1Q96BN2 335 aa17.55■□□□□ 0.4
PCDHGC3-205ENST00000617641 SLC22A12Q96S37 553 aa17.55■□□□□ 0.4
PCDHGC3-205ENST00000617641 SEMA3CQ99985 751 aa17.55■□□□□ 0.4
PCDHGC3-205ENST00000617641 SPON2Q9BUD6 331 aa17.55■□□□□ 0.4
PCDHGC3-205ENST00000617641 MAGEH1Q9H213 219 aa17.55■□□□□ 0.4
PCDHGC3-205ENST00000617641 TREX1Q9NSU2 369 aa17.55■□□□□ 0.4
PCDHGC3-205ENST00000617641 DCDC2Q9UHG0 476 aa17.55■□□□□ 0.4
PCDHGC3-205ENST00000617641 DCTN4Q9UJW0 460 aa17.55■□□□□ 0.4
PCDHGC3-205ENST00000617641 SLC12A4Q9UP95 1085 aa17.55■□□□□ 0.4
PCDHGC3-205ENST00000617641 CHD5Q8TDI0 1954 aa17.55■□□□□ 0.4
PCDHGC3-205ENST00000617641 ZBBXA8MT70 800 aa17.55■□□□□ 0.4
PCDHGC3-205ENST00000617641 TIMM44O43615 452 aa17.55■□□□□ 0.4
PCDHGC3-205ENST00000617641 PLIN3O60664 434 aa17.55■□□□□ 0.4
PCDHGC3-205ENST00000617641 GSRP00390 522 aa17.55■□□□□ 0.4
PCDHGC3-205ENST00000617641 GLDCP23378 1020 aa17.55■□□□□ 0.4
PCDHGC3-205ENST00000617641 SERPINH1P50454 418 aaKnown RBP17.55■□□□□ 0.4
PCDHGC3-205ENST00000617641 TMPRSS15P98073 1019 aa17.55■□□□□ 0.4
PCDHGC3-205ENST00000617641 BST1Q10588 318 aa17.55■□□□□ 0.4
PCDHGC3-205ENST00000617641 GALNTL6Q49A17 601 aa17.55■□□□□ 0.4
PCDHGC3-205ENST00000617641 STXBP5Q5T5C0 1151 aa17.55■□□□□ 0.4
PCDHGC3-205ENST00000617641 NECAB2Q7Z6G3 386 aa17.55■□□□□ 0.4
PCDHGC3-205ENST00000617641 DENND6AQ8IWF6 608 aa17.55■□□□□ 0.4
PCDHGC3-205ENST00000617641 ZNF358Q9NW07 568 aa17.55■□□□□ 0.4
PCDHGC3-205ENST00000617641 FGF18O76093 207 aa17.54■□□□□ 0.4
PCDHGC3-205ENST00000617641 PRKCGP05129 697 aa17.54■□□□□ 0.4
PCDHGC3-205ENST00000617641 MBL2P11226 248 aaPredicted RBP17.54■□□□□ 0.4
PCDHGC3-205ENST00000617641 GABRB3P28472 473 aa17.54■□□□□ 0.4
PCDHGC3-205ENST00000617641 PPM1AP35813 382 aa17.54■□□□□ 0.4
PCDHGC3-205ENST00000617641 GRM3Q14832 879 aa17.54■□□□□ 0.4
PCDHGC3-205ENST00000617641 ADGRF1Q5T601 910 aa17.54■□□□□ 0.4
PCDHGC3-205ENST00000617641 C16orf59Q7L2K0 433 aa17.54■□□□□ 0.4
PCDHGC3-205ENST00000617641 ZC3HC1Q86WB0 502 aaKnown RBP17.54■□□□□ 0.4
PCDHGC3-205ENST00000617641 TRIM42Q8IWZ5 723 aa17.54■□□□□ 0.4
PCDHGC3-205ENST00000617641 PPM1EQ8WY54 764 aa17.54■□□□□ 0.4
PCDHGC3-205ENST00000617641 POLR1EQ9GZS1 481 aaKnown RBP17.54■□□□□ 0.4
PCDHGC3-205ENST00000617641 ZNF395Q9H8N7 513 aaPredicted RBP17.54■□□□□ 0.4
PCDHGC3-205ENST00000617641 NSMCE4AQ9NXX6 385 aa17.54■□□□□ 0.4
PCDHGC3-205ENST00000617641 TMEM216Q9P0N5 145 aa17.54■□□□□ 0.4
PCDHGC3-205ENST00000617641 BIRC5O15392 142 aa17.54■□□□□ 0.4
PCDHGC3-205ENST00000617641 LILRB3O75022 631 aa17.54■□□□□ 0.4
PCDHGC3-205ENST00000617641 CLDN11O75508 207 aa17.54■□□□□ 0.4
PCDHGC3-205ENST00000617641 BAIAP3O94812 1187 aa17.54■□□□□ 0.4
PCDHGC3-205ENST00000617641 AHSGP02765 367 aa17.54■□□□□ 0.4
PCDHGC3-205ENST00000617641 MPP1Q00013 466 aa17.54■□□□□ 0.4
PCDHGC3-205ENST00000617641 CTBP1Q13363 440 aa17.54■□□□□ 0.4
PCDHGC3-205ENST00000617641 SIRPB2Q5JXA9 342 aa17.54■□□□□ 0.4
PCDHGC3-205ENST00000617641 ZCCHC23Q6ZST2 131 aa17.54■□□□□ 0.4
PCDHGC3-205ENST00000617641 PLD6Q8N2A8 252 aaKnown RBP17.54■□□□□ 0.4
PCDHGC3-205ENST00000617641 ZFRQ96KR1 1074 aaKnown RBP17.54■□□□□ 0.4
PCDHGC3-205ENST00000617641 TRIM55Q9BYV6 548 aa17.54■□□□□ 0.4
PCDHGC3-205ENST00000617641 SLC39A10Q9ULF5 831 aa17.54■□□□□ 0.4
PCDHGC3-205ENST00000617641 CHKBQ9Y259 395 aa17.54■□□□□ 0.4
PCDHGC3-205ENST00000617641 PCDHB12Q9Y5F1 795 aa17.54■□□□□ 0.4
PCDHGC3-205ENST00000617641 A0A096LPK6 155 aa17.53■□□□□ 0.4
PCDHGC3-205ENST00000617641 F11P03951 625 aa17.53■□□□□ 0.4
PCDHGC3-205ENST00000617641 PROCP04070 461 aa17.53■□□□□ 0.4
PCDHGC3-205ENST00000617641 RHOCP08134 193 aa17.53■□□□□ 0.4
PCDHGC3-205ENST00000617641 GSTA1P08263 222 aa17.53■□□□□ 0.4
PCDHGC3-205ENST00000617641 CNPP09543 421 aaKnown RBP17.53■□□□□ 0.4
PCDHGC3-205ENST00000617641 PPP3CCP48454 512 aa17.53■□□□□ 0.4
PCDHGC3-205ENST00000617641 IRF9Q00978 393 aa17.53■□□□□ 0.4
PCDHGC3-205ENST00000617641 MSLNQ13421 630 aaPredicted RBP17.53■□□□□ 0.4
PCDHGC3-205ENST00000617641 FASTKD1Q53R41 847 aaKnown RBP17.53■□□□□ 0.4
PCDHGC3-205ENST00000617641 ATG16L1Q676U5 607 aa17.53■□□□□ 0.4
PCDHGC3-205ENST00000617641 CNTN4Q8IWV2 1026 aa17.53■□□□□ 0.4
PCDHGC3-205ENST00000617641 CNPY4Q8N129 248 aa17.53■□□□□ 0.4
PCDHGC3-205ENST00000617641 ZNF599Q96NL3 588 aa17.53■□□□□ 0.4
PCDHGC3-205ENST00000617641 PRKD2Q9BZL6 878 aa17.53■□□□□ 0.4
PCDHGC3-205ENST00000617641 ZBP1Q9H171 429 aa17.53■□□□□ 0.4
PCDHGC3-205ENST00000617641 RHOJQ9H4E5 214 aa17.53■□□□□ 0.4
PCDHGC3-205ENST00000617641 IL21Q9HBE4 155 aa17.53■□□□□ 0.4
PCDHGC3-205ENST00000617641 PLXNA4Q9HCM2 1894 aa17.53■□□□□ 0.4
PCDHGC3-205ENST00000617641 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.53■□□□□ 0.4
PCDHGC3-205ENST00000617641 HEATR9A2RTY3 570 aa17.53■□□□□ 0.4
PCDHGC3-205ENST00000617641 ATXN1LP0C7T5 689 aaKnown RBP17.53■□□□□ 0.4
PCDHGC3-205ENST00000617641 PAMP19021 973 aa17.53■□□□□ 0.4
PCDHGC3-205ENST00000617641 ALDH3A1P30838 453 aa17.53■□□□□ 0.4
PCDHGC3-205ENST00000617641 PGGT1BP53609 377 aa17.53■□□□□ 0.4
PCDHGC3-205ENST00000617641 SMAD3P84022 425 aaKnown RBP17.53■□□□□ 0.4
PCDHGC3-205ENST00000617641 ZNF177Q13360 481 aaPredicted RBP17.53■□□□□ 0.4
PCDHGC3-205ENST00000617641 INSCQ1MX18 579 aa17.53■□□□□ 0.4
PCDHGC3-205ENST00000617641 TXNDC8Q6A555 127 aa17.53■□□□□ 0.4
PCDHGC3-205ENST00000617641 KIAA0930Q6ICG6 404 aaPredicted RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms