RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 CKMP06732 381 aa20.91■□□□□ 0.94
CNTNAP3B-212ENST00000617422 NMBRP28336 390 aa20.91■□□□□ 0.94
CNTNAP3B-212ENST00000617422 ITKQ08881 620 aa20.91■□□□□ 0.94
CNTNAP3B-212ENST00000617422 ANKRD20A4Q4UJ75 823 aa20.91■□□□□ 0.94
CNTNAP3B-212ENST00000617422 LINC00523Q86TU6 105 aa20.91■□□□□ 0.94
CNTNAP3B-212ENST00000617422 GIMAP7Q8NHV1 300 aa20.91■□□□□ 0.94
CNTNAP3B-212ENST00000617422 GDAP1Q8TB36 358 aa20.91■□□□□ 0.94
CNTNAP3B-212ENST00000617422 MRPS31Q92665 395 aaKnown RBP20.91■□□□□ 0.94
CNTNAP3B-212ENST00000617422 NSMCE3Q96MG7 304 aa20.91■□□□□ 0.94
CNTNAP3B-212ENST00000617422 IL22Q9GZX6 179 aa20.91■□□□□ 0.94
CNTNAP3B-212ENST00000617422 SENP1Q9P0U3 644 aa20.91■□□□□ 0.94
CNTNAP3B-212ENST00000617422 MCM8Q9UJA3 840 aa20.91■□□□□ 0.94
CNTNAP3B-212ENST00000617422 GRID1Q9ULK0 1009 aa20.91■□□□□ 0.94
CNTNAP3B-212ENST00000617422 TBC1D30Q9Y2I9 924 aa20.91■□□□□ 0.94
CNTNAP3B-212ENST00000617422 USP15Q9Y4E8 981 aaPredicted RBP20.91■□□□□ 0.94
CNTNAP3B-212ENST00000617422 C5orf42Q9H799 3197 aa20.91■□□□□ 0.94
CNTNAP3B-212ENST00000617422 TRIM49D1C9J1S8 452 aa20.9■□□□□ 0.94
CNTNAP3B-212ENST00000617422 C5orf67F2Z3F1 127 aa20.9■□□□□ 0.94
CNTNAP3B-212ENST00000617422 EPCAMP16422 314 aa20.9■□□□□ 0.94
CNTNAP3B-212ENST00000617422 RIPK1Q13546 671 aa20.9■□□□□ 0.94
CNTNAP3B-212ENST00000617422 POU6F1Q14863 301 aa20.9■□□□□ 0.94
CNTNAP3B-212ENST00000617422 SPANXN3Q5MJ09 141 aa20.9■□□□□ 0.94
CNTNAP3B-212ENST00000617422 CHST9Q7L1S5 443 aa20.9■□□□□ 0.94
CNTNAP3B-212ENST00000617422 MICAL1Q8TDZ2 1067 aa20.9■□□□□ 0.94
CNTNAP3B-212ENST00000617422 TADA1Q96BN2 335 aa20.9■□□□□ 0.94
CNTNAP3B-212ENST00000617422 CERS2Q96G23 380 aa20.9■□□□□ 0.94
CNTNAP3B-212ENST00000617422 SPON2Q9BUD6 331 aa20.9■□□□□ 0.94
CNTNAP3B-212ENST00000617422 SOX13Q9UN79 622 aa20.9■□□□□ 0.94
CNTNAP3B-212ENST00000617422 IQANK1A0A1B0GTG1 560 aa20.9■□□□□ 0.94
CNTNAP3B-212ENST00000617422 FAM237BA0A1B0GVD1 139 aa20.9■□□□□ 0.94
CNTNAP3B-212ENST00000617422 USP1O94782 785 aa20.9■□□□□ 0.94
CNTNAP3B-212ENST00000617422 CA3P07451 260 aa20.9■□□□□ 0.94
CNTNAP3B-212ENST00000617422 SLC1A5Q15758 541 aa20.9■□□□□ 0.94
CNTNAP3B-212ENST00000617422 PPM1LQ5SGD2 360 aa20.9■□□□□ 0.94
CNTNAP3B-212ENST00000617422 TTC39BQ5VTQ0 682 aaPredicted RBP20.9■□□□□ 0.94
CNTNAP3B-212ENST00000617422 IL31Q6EBC2 164 aa20.9■□□□□ 0.94
CNTNAP3B-212ENST00000617422 MARK2Q7KZI7 788 aaKnown RBP20.9■□□□□ 0.94
CNTNAP3B-212ENST00000617422 BANPQ8N9N5 519 aa20.9■□□□□ 0.94
CNTNAP3B-212ENST00000617422 WFDC5Q8TCV5 224 aa20.9■□□□□ 0.94
CNTNAP3B-212ENST00000617422 BHMTQ93088 406 aa20.9■□□□□ 0.94
CNTNAP3B-212ENST00000617422 ATP13A1Q9HD20 1204 aa20.9■□□□□ 0.94
CNTNAP3B-212ENST00000617422 MAN1C1Q9NR34 630 aa20.9■□□□□ 0.94
CNTNAP3B-212ENST00000617422 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.89■□□□□ 0.94
CNTNAP3B-212ENST00000617422 TBL1XO60907 577 aa20.89■□□□□ 0.94
CNTNAP3B-212ENST00000617422 MOSPD3O75425 235 aa20.89■□□□□ 0.94
CNTNAP3B-212ENST00000617422 ATP6V1G2O95670 118 aa20.89■□□□□ 0.94
CNTNAP3B-212ENST00000617422 SLC7A9P82251 487 aa20.89■□□□□ 0.94
CNTNAP3B-212ENST00000617422 ZNF177Q13360 481 aaPredicted RBP20.89■□□□□ 0.94
CNTNAP3B-212ENST00000617422 MPP3Q13368 585 aa20.89■□□□□ 0.94
CNTNAP3B-212ENST00000617422 TMCO4Q5TGY1 634 aa20.89■□□□□ 0.94
CNTNAP3B-212ENST00000617422 RIN3Q8TB24 985 aa20.89■□□□□ 0.94
CNTNAP3B-212ENST00000617422 SHKBP1Q8TBC3 707 aa20.89■□□□□ 0.94
CNTNAP3B-212ENST00000617422 KIFC1Q9BW19 673 aa20.89■□□□□ 0.94
CNTNAP3B-212ENST00000617422 FSD1LQ9BXM9 530 aa20.89■□□□□ 0.94
CNTNAP3B-212ENST00000617422 ACE2Q9BYF1 805 aaPredicted RBP20.89■□□□□ 0.94
CNTNAP3B-212ENST00000617422 CXorf56Q9H5V9 222 aa20.89■□□□□ 0.94
CNTNAP3B-212ENST00000617422 ASAH2Q9NR71 780 aa20.89■□□□□ 0.94
CNTNAP3B-212ENST00000617422 CFAP97Q9P2B7 532 aa20.89■□□□□ 0.94
CNTNAP3B-212ENST00000617422 ILVBLA1L0T0 632 aa20.89■□□□□ 0.93
CNTNAP3B-212ENST00000617422 RFPL1O75677 317 aa20.89■□□□□ 0.93
CNTNAP3B-212ENST00000617422 RHOCP08134 193 aa20.89■□□□□ 0.93
CNTNAP3B-212ENST00000617422 RNF219Q5W0B1 726 aaPredicted RBP20.89■□□□□ 0.93
CNTNAP3B-212ENST00000617422 FAM217AQ8IXS0 508 aa20.89■□□□□ 0.93
CNTNAP3B-212ENST00000617422 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.89■□□□□ 0.93
CNTNAP3B-212ENST00000617422 AGAP2Q99490 1192 aa20.89■□□□□ 0.93
CNTNAP3B-212ENST00000617422 LBHD1Q9BQE6 289 aaPredicted RBP20.89■□□□□ 0.93
CNTNAP3B-212ENST00000617422 RETREG1Q9H6L5 497 aa20.89■□□□□ 0.93
CNTNAP3B-212ENST00000617422 CCL26Q9Y258 94 aa20.89■□□□□ 0.93
CNTNAP3B-212ENST00000617422 KDELR3O43731 214 aa20.88■□□□□ 0.93
CNTNAP3B-212ENST00000617422 ASMTLO95671 621 aa20.88■□□□□ 0.93
CNTNAP3B-212ENST00000617422 MT-ND3P03897 115 aa20.88■□□□□ 0.93
CNTNAP3B-212ENST00000617422 PYGBP11216 843 aa20.88■□□□□ 0.93
CNTNAP3B-212ENST00000617422 CA4P22748 312 aa20.88■□□□□ 0.93
CNTNAP3B-212ENST00000617422 RGRP47804 291 aa20.88■□□□□ 0.93
CNTNAP3B-212ENST00000617422 MGAT5Q09328 741 aa20.88■□□□□ 0.93
CNTNAP3B-212ENST00000617422 MSLNQ13421 630 aaPredicted RBP20.88■□□□□ 0.93
CNTNAP3B-212ENST00000617422 SLC5A9Q2M3M2 681 aa20.88■□□□□ 0.93
CNTNAP3B-212ENST00000617422 MROH9Q5TGP6 573 aa20.88■□□□□ 0.93
CNTNAP3B-212ENST00000617422 SETD3Q86TU7 594 aaPredicted RBP20.88■□□□□ 0.93
CNTNAP3B-212ENST00000617422 BBS7Q8IWZ6 715 aa20.88■□□□□ 0.93
CNTNAP3B-212ENST00000617422 SLC25A41Q8N5S1 370 aa20.88■□□□□ 0.93
CNTNAP3B-212ENST00000617422 GPATCH11Q8N954 259 aa20.88■□□□□ 0.93
CNTNAP3B-212ENST00000617422 SEMA3CQ99985 751 aa20.88■□□□□ 0.93
CNTNAP3B-212ENST00000617422 DNMT3BQ9UBC3 853 aaKnown RBP20.88■□□□□ 0.93
CNTNAP3B-212ENST00000617422 HELZP42694 1942 aaKnown RBP20.88■□□□□ 0.93
CNTNAP3B-212ENST00000617422 GOLGA8TH3BQL2 631 aa20.87■□□□□ 0.93
CNTNAP3B-212ENST00000617422 PER2O15055 1255 aa20.87■□□□□ 0.93
CNTNAP3B-212ENST00000617422 LATS1O95835 1130 aa20.87■□□□□ 0.93
CNTNAP3B-212ENST00000617422 CD160O95971 181 aa20.87■□□□□ 0.93
CNTNAP3B-212ENST00000617422 C1RP00736 705 aa20.87■□□□□ 0.93
CNTNAP3B-212ENST00000617422 SNRPAP09012 282 aaKnown RBP20.87■□□□□ 0.93
CNTNAP3B-212ENST00000617422 MZF1P28698 734 aaPredicted RBP20.87■□□□□ 0.93
CNTNAP3B-212ENST00000617422 POTEHQ6S545 545 aa20.87■□□□□ 0.93
CNTNAP3B-212ENST00000617422 PACS1Q6VY07 963 aa20.87■□□□□ 0.93
CNTNAP3B-212ENST00000617422 ELMOD1Q8N336 334 aa20.87■□□□□ 0.93
CNTNAP3B-212ENST00000617422 NSMCE1Q8WV22 266 aa20.87■□□□□ 0.93
CNTNAP3B-212ENST00000617422 SSU72Q9NP77 194 aaKnown RBP20.87■□□□□ 0.93
CNTNAP3B-212ENST00000617422 NKIRAS1Q9NYS0 192 aa20.87■□□□□ 0.93
CNTNAP3B-212ENST00000617422 SLC17A7Q9P2U7 560 aa20.87■□□□□ 0.93
CNTNAP3B-212ENST00000617422 TCP11X1B4DZS4 312 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms