RNA–Protein interactions for RNA: ENST00000616140.1

CPSF1-212, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF1, Length 4,494 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-212ENST00000616140 BTRCQ9Y297 605 aa14.15□□□□□ -0.14
CPSF1-212ENST00000616140 MYPNQ86TC9 1320 aa14.15□□□□□ -0.14
CPSF1-212ENST00000616140 PIK3R1P27986 724 aa14.15□□□□□ -0.14
CPSF1-212ENST00000616140 PPP2R1BP30154 601 aa14.15□□□□□ -0.14
CPSF1-212ENST00000616140 ADRA1BP35368 520 aa14.15□□□□□ -0.14
CPSF1-212ENST00000616140 GRM5P41594 1212 aa14.15□□□□□ -0.14
CPSF1-212ENST00000616140 WNT3AP56704 352 aa14.15□□□□□ -0.14
CPSF1-212ENST00000616140 BNIP1Q12981 228 aa14.15□□□□□ -0.14
CPSF1-212ENST00000616140 MTA1Q13330 715 aa14.15□□□□□ -0.14
CPSF1-212ENST00000616140 STK40Q8N2I9 435 aa14.15□□□□□ -0.14
CPSF1-212ENST00000616140 ACTRT2Q8TDY3 377 aa14.15□□□□□ -0.14
CPSF1-212ENST00000616140 APOL4Q9BPW4 351 aa14.15□□□□□ -0.14
CPSF1-212ENST00000616140 TPRKBQ9Y3C4 175 aa14.15□□□□□ -0.14
CPSF1-212ENST00000616140 CNTRLQ7Z7A1 2325 aa14.15□□□□□ -0.14
CPSF1-212ENST00000616140 PGK1P00558 417 aa14.15□□□□□ -0.14
CPSF1-212ENST00000616140 KRT20P35900 424 aa14.15□□□□□ -0.14
CPSF1-212ENST00000616140 GPR15P49685 360 aa14.15□□□□□ -0.14
CPSF1-212ENST00000616140 IRF8Q02556 426 aa14.15□□□□□ -0.14
CPSF1-212ENST00000616140 MARK2Q7KZI7 788 aaKnown RBP14.15□□□□□ -0.14
CPSF1-212ENST00000616140 TMEM132CQ8N3T6 1108 aa14.15□□□□□ -0.14
CPSF1-212ENST00000616140 ZNF276Q8N554 614 aa14.15□□□□□ -0.14
CPSF1-212ENST00000616140 TSPAN14Q8NG11 270 aa14.15□□□□□ -0.14
CPSF1-212ENST00000616140 FNIP1Q8TF40 1166 aa14.15□□□□□ -0.14
CPSF1-212ENST00000616140 RSPH1Q8WYR4 309 aa14.15□□□□□ -0.14
CPSF1-212ENST00000616140 MYLPFQ96A32 169 aa14.15□□□□□ -0.14
CPSF1-212ENST00000616140 STN1Q9H668 368 aaKnown RBP14.15□□□□□ -0.14
CPSF1-212ENST00000616140 GOLGA2P5Q9HBQ8 144 aa14.15□□□□□ -0.14
CPSF1-212ENST00000616140 COL20A1Q9P218 1284 aa14.15□□□□□ -0.14
CPSF1-212ENST00000616140 DISP2A7MBM2 1401 aa14.14□□□□□ -0.15
CPSF1-212ENST00000616140 FAM220BPB1ANY3 271 aa14.14□□□□□ -0.15
CPSF1-212ENST00000616140 H3BN98 237 aa14.14□□□□□ -0.15
CPSF1-212ENST00000616140 TRIM38O00635 465 aa14.14□□□□□ -0.15
CPSF1-212ENST00000616140 FFAR3O14843 346 aa14.14□□□□□ -0.15
CPSF1-212ENST00000616140 GPR42O15529 346 aa14.14□□□□□ -0.15
CPSF1-212ENST00000616140 ZBTB14O43829 449 aa14.14□□□□□ -0.15
CPSF1-212ENST00000616140 PQBP1O60828 265 aaKnown RBP14.14□□□□□ -0.15
CPSF1-212ENST00000616140 IGSF6O95976 241 aa14.14□□□□□ -0.15
CPSF1-212ENST00000616140 CLK2P49760 499 aaKnown RBP14.14□□□□□ -0.15
CPSF1-212ENST00000616140 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.14□□□□□ -0.159e-6■■□□□ 11.8
CPSF1-212ENST00000616140 FAM45AQ8TCE6 357 aa14.14□□□□□ -0.15
CPSF1-212ENST00000616140 TMEM109Q9BVC6 243 aa14.14□□□□□ -0.15
CPSF1-212ENST00000616140 ZYG11BQ9C0D3 744 aa14.14□□□□□ -0.15
CPSF1-212ENST00000616140 C6orf62Q9GZU0 229 aaPredicted RBP14.14□□□□□ -0.15
CPSF1-212ENST00000616140 BCAS3Q9H6U6 928 aa14.14□□□□□ -0.15
CPSF1-212ENST00000616140 ASB8Q9H765 288 aa14.14□□□□□ -0.15
CPSF1-212ENST00000616140 SYNDIG1Q9H7V2 258 aa14.14□□□□□ -0.15
CPSF1-212ENST00000616140 DMAC2Q9NW81 257 aa14.14□□□□□ -0.15
CPSF1-212ENST00000616140 NOCTQ9UK39 431 aaKnown RBP14.14□□□□□ -0.15
CPSF1-212ENST00000616140 RECQL5O94762 991 aaPredicted RBP14.14□□□□□ -0.15
CPSF1-212ENST00000616140 ALDH1A2O94788 518 aa14.14□□□□□ -0.15
CPSF1-212ENST00000616140 PRKG2Q13237 762 aa14.14□□□□□ -0.15
CPSF1-212ENST00000616140 DCTN2Q13561 401 aaKnown RBP14.14□□□□□ -0.15
CPSF1-212ENST00000616140 SQLEQ14534 574 aa14.14□□□□□ -0.15
CPSF1-212ENST00000616140 SLC25A52Q3SY17 297 aa14.14□□□□□ -0.15
CPSF1-212ENST00000616140 ANKRD22Q5VYY1 191 aa14.14□□□□□ -0.15
CPSF1-212ENST00000616140 POTEHQ6S545 545 aa14.14□□□□□ -0.15
CPSF1-212ENST00000616140 STRADAQ7RTN6 431 aa14.14□□□□□ -0.15
CPSF1-212ENST00000616140 ITIH5Q86UX2 942 aa14.14□□□□□ -0.15
CPSF1-212ENST00000616140 XYLT1Q86Y38 959 aa14.14□□□□□ -0.15
CPSF1-212ENST00000616140 SYT12Q8IV01 421 aa14.14□□□□□ -0.15
CPSF1-212ENST00000616140 KBTBD2Q8IY47 623 aa14.14□□□□□ -0.15
CPSF1-212ENST00000616140 RBM15BQ8NDT2 890 aaKnown RBP14.14□□□□□ -0.15
CPSF1-212ENST00000616140 PTCD3Q96EY7 689 aaKnown RBP14.14□□□□□ -0.15
CPSF1-212ENST00000616140 FCRL2Q96LA5 508 aaPredicted RBP14.14□□□□□ -0.15
CPSF1-212ENST00000616140 ZFP14Q9HCL3 533 aa14.14□□□□□ -0.15
CPSF1-212ENST00000616140 DAPK2Q9UIK4 370 aa14.14□□□□□ -0.15
CPSF1-212ENST00000616140 MOXD2PA6NHM9 499 aa14.14□□□□□ -0.15
CPSF1-212ENST00000616140 PDZK1P1A8MUH7 402 aa14.14□□□□□ -0.15
CPSF1-212ENST00000616140 KPNA3O00505 521 aaPredicted RBP14.14□□□□□ -0.15
CPSF1-212ENST00000616140 ANXA6P08133 673 aa14.14□□□□□ -0.15
CPSF1-212ENST00000616140 CD48P09326 243 aa14.14□□□□□ -0.15
CPSF1-212ENST00000616140 RPL5P46777 297 aaKnown RBP14.14□□□□□ -0.15
CPSF1-212ENST00000616140 PPIL2Q13356 520 aa14.14□□□□□ -0.15
CPSF1-212ENST00000616140 KRR1Q13601 381 aaKnown RBP14.14□□□□□ -0.15
CPSF1-212ENST00000616140 TRIP4Q15650 581 aaPredicted RBP14.14□□□□□ -0.15
CPSF1-212ENST00000616140 MAPKAPK3Q16644 382 aa14.14□□□□□ -0.15
CPSF1-212ENST00000616140 ARMCX4Q5H9R4 360 aa14.14□□□□□ -0.15
CPSF1-212ENST00000616140 SDHAF4Q5VUM1 108 aa14.14□□□□□ -0.15
CPSF1-212ENST00000616140 FAM35AQ86V20 835 aa14.14□□□□□ -0.15
CPSF1-212ENST00000616140 C10orf53Q8N6V4 93 aa14.14□□□□□ -0.15
CPSF1-212ENST00000616140 C1orf127Q8N9H9 656 aa14.14□□□□□ -0.15
CPSF1-212ENST00000616140 MTFMTQ96DP5 389 aaKnown RBP14.14□□□□□ -0.15
CPSF1-212ENST00000616140 MLPHQ9BV36 600 aaPredicted RBP14.14□□□□□ -0.15
CPSF1-212ENST00000616140 C2orf49Q9BVC5 232 aaPredicted RBP14.14□□□□□ -0.15
CPSF1-212ENST00000616140 DUSP16Q9BY84 665 aa14.14□□□□□ -0.15
CPSF1-212ENST00000616140 RHOJQ9H4E5 214 aa14.14□□□□□ -0.15
CPSF1-212ENST00000616140 UXTQ9UBK9 157 aaPredicted RBP14.14□□□□□ -0.15
CPSF1-212ENST00000616140 MTF2Q9Y483 593 aaPredicted RBP14.14□□□□□ -0.15
CPSF1-212ENST00000616140 CLUHO75153 1309 aa14.14□□□□□ -0.15
CPSF1-212ENST00000616140 PIK3CGP48736 1102 aa14.13□□□□□ -0.15
CPSF1-212ENST00000616140 HK2P52789 917 aa14.13□□□□□ -0.15
CPSF1-212ENST00000616140 C21orf59P57076 290 aa14.13□□□□□ -0.15
CPSF1-212ENST00000616140 ARMC4Q5T2S8 1044 aa14.13□□□□□ -0.15
CPSF1-212ENST00000616140 SPESP1Q6UW49 350 aa14.13□□□□□ -0.15
CPSF1-212ENST00000616140 B3GNT6Q6ZMB0 384 aa14.13□□□□□ -0.15
CPSF1-212ENST00000616140 SVOPQ8N4V2 548 aa14.13□□□□□ -0.15
CPSF1-212ENST00000616140 TLCD1Q96CP7 247 aa14.13□□□□□ -0.15
CPSF1-212ENST00000616140 AHSPQ9NZD4 102 aa14.13□□□□□ -0.15
CPSF1-212ENST00000616140 RIMBP3CA6NJZ7 1639 aa14.13□□□□□ -0.15
CPSF1-212ENST00000616140 RIMBP3BA6NNM3 1639 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms