RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 PCDH19Q8TAB3 1148 aa17■□□□□ 0.31
CBWD3-211ENST00000615061 RAPGEF5Q92565 580 aa17■□□□□ 0.31
CBWD3-211ENST00000615061 PCED1AQ9H1Q7 454 aa17■□□□□ 0.31
CBWD3-211ENST00000615061 LHX3Q9UBR4 397 aa17■□□□□ 0.31
CBWD3-211ENST00000615061 IPO11Q9UI26 975 aaKnown RBP17■□□□□ 0.31
CBWD3-211ENST00000615061 LCMT1Q9UIC8 334 aa17■□□□□ 0.31
CBWD3-211ENST00000615061 TMEM131Q92545 1883 aa16.99■□□□□ 0.31
CBWD3-211ENST00000615061 PRR5-ARHGAP8B1AHC4 643 aa16.99■□□□□ 0.31
CBWD3-211ENST00000615061 C10orf142B7Z368 130 aa16.99■□□□□ 0.31
CBWD3-211ENST00000615061 INSIG1O15503 277 aa16.99■□□□□ 0.31
CBWD3-211ENST00000615061 PLRG1O43660 514 aaKnown RBP16.99■□□□□ 0.31
CBWD3-211ENST00000615061 MAP3K6O95382 1288 aa16.99■□□□□ 0.31
CBWD3-211ENST00000615061 KRT7P08729 469 aa16.99■□□□□ 0.31
CBWD3-211ENST00000615061 TNNT1P13805 278 aa16.99■□□□□ 0.31
CBWD3-211ENST00000615061 ENGP17813 658 aa16.99■□□□□ 0.31
CBWD3-211ENST00000615061 NOP2P46087 812 aaKnown RBP16.99■□□□□ 0.31
CBWD3-211ENST00000615061 ARHGAP8P85298 464 aa16.99■□□□□ 0.31
CBWD3-211ENST00000615061 TCEAL1Q15170 157 aa16.99■□□□□ 0.31
CBWD3-211ENST00000615061 ZFYVE27Q5T4F4 411 aa16.99■□□□□ 0.31
CBWD3-211ENST00000615061 LAYNQ6UX15 382 aa16.99■□□□□ 0.31
CBWD3-211ENST00000615061 PLPP6Q8IY26 295 aa16.99■□□□□ 0.31
CBWD3-211ENST00000615061 OR2I1PQ8NGU4 316 aa16.99■□□□□ 0.31
CBWD3-211ENST00000615061 BAG1Q99933 345 aaPredicted RBP16.99■□□□□ 0.31
CBWD3-211ENST00000615061 NUSAP1Q9BXS6 441 aaKnown RBP16.99■□□□□ 0.31
CBWD3-211ENST00000615061 SALL4Q9UJQ4 1053 aa16.99■□□□□ 0.31
CBWD3-211ENST00000615061 CDX4O14627 284 aaPredicted RBP16.98■□□□□ 0.31
CBWD3-211ENST00000615061 FOXD2O60548 495 aaPredicted RBP16.98■□□□□ 0.31
CBWD3-211ENST00000615061 BUB1BO60566 1050 aaPredicted RBP16.98■□□□□ 0.31
CBWD3-211ENST00000615061 SERPINF2P08697 491 aa16.98■□□□□ 0.31
CBWD3-211ENST00000615061 DPP6P42658 865 aa16.98■□□□□ 0.31
CBWD3-211ENST00000615061 RGRP47804 291 aa16.98■□□□□ 0.31
CBWD3-211ENST00000615061 ID4P47928 161 aa16.98■□□□□ 0.31
CBWD3-211ENST00000615061 MYLK3Q32MK0 819 aa16.98■□□□□ 0.31
CBWD3-211ENST00000615061 ANKRD20A8PQ5CZ79 823 aa16.98■□□□□ 0.31
CBWD3-211ENST00000615061 ERN2Q76MJ5 926 aaKnown RBP16.98■□□□□ 0.31
CBWD3-211ENST00000615061 LZTR1Q8N653 840 aa16.98■□□□□ 0.31
CBWD3-211ENST00000615061 CEP76Q8TAP6 659 aa16.98■□□□□ 0.31
CBWD3-211ENST00000615061 CASKIN2Q8WXE0 1202 aa16.98■□□□□ 0.31
CBWD3-211ENST00000615061 SP110Q9HB58 689 aa16.98■□□□□ 0.31
CBWD3-211ENST00000615061 RCOR3Q9P2K3 495 aaPredicted RBP16.98■□□□□ 0.31
CBWD3-211ENST00000615061 IMPACTQ9P2X3 320 aa16.98■□□□□ 0.31
CBWD3-211ENST00000615061 CDV3Q9UKY7 258 aaKnown RBP16.98■□□□□ 0.31
CBWD3-211ENST00000615061 SLC6A14Q9UN76 642 aa16.98■□□□□ 0.31
CBWD3-211ENST00000615061 DUSP10Q9Y6W6 482 aa16.98■□□□□ 0.31
CBWD3-211ENST00000615061 A0A1B0GTW7 788 aa16.97■□□□□ 0.31
CBWD3-211ENST00000615061 BCAT2O15382 392 aaPredicted RBP16.97■□□□□ 0.31
CBWD3-211ENST00000615061 SLC7A4O43246 635 aa16.97■□□□□ 0.31
CBWD3-211ENST00000615061 MFSD11O43934 449 aa16.97■□□□□ 0.31
CBWD3-211ENST00000615061 GJB3O75712 270 aa16.97■□□□□ 0.31
CBWD3-211ENST00000615061 PALMO75781 387 aa16.97■□□□□ 0.31
CBWD3-211ENST00000615061 UGT2B4P06133 528 aa16.97■□□□□ 0.31
CBWD3-211ENST00000615061 GNSP15586 552 aa16.97■□□□□ 0.31
CBWD3-211ENST00000615061 COMTP21964 271 aa16.97■□□□□ 0.31
CBWD3-211ENST00000615061 MAT2AP31153 395 aaKnown RBP16.97■□□□□ 0.31
CBWD3-211ENST00000615061 MAPK8P45983 427 aa16.97■□□□□ 0.31
CBWD3-211ENST00000615061 STPG1Q5TH74 334 aa16.97■□□□□ 0.31
CBWD3-211ENST00000615061 NCBP2-AS2Q69YL0 99 aa16.97■□□□□ 0.31
CBWD3-211ENST00000615061 PARS2Q7L3T8 475 aaKnown RBP16.97■□□□□ 0.31
CBWD3-211ENST00000615061 TSEN2Q8NCE0 465 aaKnown RBP16.97■□□□□ 0.31
CBWD3-211ENST00000615061 NETO1Q8TDF5 533 aa16.97■□□□□ 0.31
CBWD3-211ENST00000615061 GDAP1L1Q96MZ0 367 aa16.97■□□□□ 0.31
CBWD3-211ENST00000615061 ZNF670Q9BS34 389 aa16.97■□□□□ 0.31
CBWD3-211ENST00000615061 DYRK4Q9NR20 520 aa16.97■□□□□ 0.31
CBWD3-211ENST00000615061 DLL3Q9NYJ7 618 aa16.97■□□□□ 0.31
CBWD3-211ENST00000615061 SUSD2Q9UGT4 822 aa16.97■□□□□ 0.31
CBWD3-211ENST00000615061 PCNX2A6NKB5 2137 aa16.97■□□□□ 0.31
CBWD3-211ENST00000615061 LRRD1A4D1F6 860 aa16.97■□□□□ 0.31
CBWD3-211ENST00000615061 C4orf47A7E2U8 309 aa16.97■□□□□ 0.31
CBWD3-211ENST00000615061 WNT9AO14904 365 aa16.97■□□□□ 0.31
CBWD3-211ENST00000615061 MUSKO15146 869 aa16.97■□□□□ 0.31
CBWD3-211ENST00000615061 POP4O95707 220 aaKnown RBP16.97■□□□□ 0.31
CBWD3-211ENST00000615061 IGSF6O95976 241 aa16.97■□□□□ 0.31
CBWD3-211ENST00000615061 KDELR1P24390 212 aa16.97■□□□□ 0.31
CBWD3-211ENST00000615061 CD27P26842 260 aa16.97■□□□□ 0.31
CBWD3-211ENST00000615061 CSNK1EP49674 416 aaKnown RBP16.97■□□□□ 0.31
CBWD3-211ENST00000615061 IL10RBQ08334 325 aa16.97■□□□□ 0.31
CBWD3-211ENST00000615061 SLC10A7Q0GE19 358 aa16.97■□□□□ 0.31
CBWD3-211ENST00000615061 PDK2Q15119 407 aa16.97■□□□□ 0.31
CBWD3-211ENST00000615061 PQLC3Q8N755 202 aa16.97■□□□□ 0.31
CBWD3-211ENST00000615061 LRRN4Q8WUT4 740 aa16.97■□□□□ 0.31
CBWD3-211ENST00000615061 FAF2Q96CS3 445 aa16.97■□□□□ 0.31
CBWD3-211ENST00000615061 KLHL32Q96NJ5 620 aa16.97■□□□□ 0.31
CBWD3-211ENST00000615061 GTPBP2Q9BX10 602 aaKnown RBP16.97■□□□□ 0.31
CBWD3-211ENST00000615061 HDAC8Q9BY41 377 aa16.97■□□□□ 0.31
CBWD3-211ENST00000615061 TM9SF3Q9HD45 589 aa16.97■□□□□ 0.31
CBWD3-211ENST00000615061 ALG6Q9Y672 507 aa16.97■□□□□ 0.31
CBWD3-211ENST00000615061 A0A0U1RQJ8 604 aa16.96■□□□□ 0.31
CBWD3-211ENST00000615061 A0A1W2PPC4 97 aa16.96■□□□□ 0.31
CBWD3-211ENST00000615061 MAFKO60675 156 aa16.96■□□□□ 0.31
CBWD3-211ENST00000615061 PIGNO95427 931 aa16.96■□□□□ 0.31
CBWD3-211ENST00000615061 PEX11BO96011 259 aa16.96■□□□□ 0.31
CBWD3-211ENST00000615061 ADRB3P13945 408 aa16.96■□□□□ 0.31
CBWD3-211ENST00000615061 ITGB7P26010 798 aa16.96■□□□□ 0.31
CBWD3-211ENST00000615061 HADHBP55084 474 aaKnown RBP16.96■□□□□ 0.31
CBWD3-211ENST00000615061 BNC1Q01954 994 aa16.96■□□□□ 0.31
CBWD3-211ENST00000615061 LRRC73Q5JTD7 316 aa16.96■□□□□ 0.31
CBWD3-211ENST00000615061 RABEPKQ7Z6M1 372 aa16.96■□□□□ 0.31
CBWD3-211ENST00000615061 PPP1R16AQ96I34 528 aa16.96■□□□□ 0.31
CBWD3-211ENST00000615061 SLC6A18Q96N87 628 aa16.96■□□□□ 0.31
CBWD3-211ENST00000615061 DESI2Q9BSY9 194 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms