RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 VPS26BQ4G0F5 336 aa11.92□□□□□ -0.5
CDH5-208ENST00000614547 PABPC1LQ4VXU2 614 aaKnown RBP11.92□□□□□ -0.5
CDH5-208ENST00000614547 FNDC8Q8TC99 324 aa11.92□□□□□ -0.5
CDH5-208ENST00000614547 FNIP1Q8TF40 1166 aa11.92□□□□□ -0.5
CDH5-208ENST00000614547 GLMNQ92990 594 aa11.92□□□□□ -0.5
CDH5-208ENST00000614547 TIMM13Q9Y5L4 95 aaPredicted RBP11.92□□□□□ -0.5
CDH5-208ENST00000614547 DDX60LQ5H9U9 1706 aaKnown RBP11.92□□□□□ -0.5
CDH5-208ENST00000614547 UBR2Q8IWV8 1755 aa11.92□□□□□ -0.5
CDH5-208ENST00000614547 ERI2A8K979 691 aaKnown RBP11.92□□□□□ -0.5
CDH5-208ENST00000614547 CLDN5O00501 218 aa11.92□□□□□ -0.5
CDH5-208ENST00000614547 NRP2O60462 931 aa11.92□□□□□ -0.5
CDH5-208ENST00000614547 SNRPB2P08579 225 aaKnown RBP11.92□□□□□ -0.5
CDH5-208ENST00000614547 MTHFD1P11586 935 aaKnown RBP11.92□□□□□ -0.5
CDH5-208ENST00000614547 AKAP5P24588 427 aa11.92□□□□□ -0.5
CDH5-208ENST00000614547 YWHAQP27348 245 aa11.92□□□□□ -0.5
CDH5-208ENST00000614547 KPNA2P52292 529 aaKnown RBP11.92□□□□□ -0.5
CDH5-208ENST00000614547 BCAT1P54687 386 aa11.92□□□□□ -0.5
CDH5-208ENST00000614547 HNRNPDQ14103 355 aaKnown RBP11.92□□□□□ -0.5
CDH5-208ENST00000614547 BNIPLQ7Z465 357 aa11.92□□□□□ -0.5
CDH5-208ENST00000614547 RAB44Q7Z6P3 723 aaPredicted RBP11.92□□□□□ -0.5
CDH5-208ENST00000614547 RIN3Q8TB24 985 aa11.92□□□□□ -0.5
CDH5-208ENST00000614547 CRYL1Q9Y2S2 319 aa11.92□□□□□ -0.5
CDH5-208ENST00000614547 CITO14578 2027 aa11.91□□□□□ -0.5
CDH5-208ENST00000614547 KIAA1551Q9HCM1 1747 aa11.91□□□□□ -0.5
CDH5-208ENST00000614547 TMEM247A6NEH6 219 aa11.91□□□□□ -0.5
CDH5-208ENST00000614547 MPOP05164 745 aa11.91□□□□□ -0.5
CDH5-208ENST00000614547 HOXC6P09630 235 aa11.91□□□□□ -0.5
CDH5-208ENST00000614547 KIZQ2M2Z5 673 aa11.91□□□□□ -0.5
CDH5-208ENST00000614547 SPANXN3Q5MJ09 141 aa11.91□□□□□ -0.5
CDH5-208ENST00000614547 SAMD4BQ5PRF9 694 aaKnown RBP11.91□□□□□ -0.5
CDH5-208ENST00000614547 KCTD8Q6ZWB6 473 aa11.91□□□□□ -0.5
CDH5-208ENST00000614547 OTOP3Q7RTS5 596 aa11.91□□□□□ -0.5
CDH5-208ENST00000614547 CROCCP3Q8IVE0 287 aa11.91□□□□□ -0.5
CDH5-208ENST00000614547 MIER2Q8N344 545 aa11.91□□□□□ -0.5
CDH5-208ENST00000614547 SPATA22Q8NHS9 363 aa11.91□□□□□ -0.5
CDH5-208ENST00000614547 SLC45A3Q96JT2 553 aa11.91□□□□□ -0.5
CDH5-208ENST00000614547 RBBP8Q99708 897 aa11.91□□□□□ -0.5
CDH5-208ENST00000614547 SENP6Q9GZR1 1112 aaPredicted RBP11.91□□□□□ -0.5
CDH5-208ENST00000614547 ALG9Q9H6U8 611 aa11.91□□□□□ -0.5
CDH5-208ENST00000614547 HSFX1Q9UBD0 423 aa11.91□□□□□ -0.5
CDH5-208ENST00000614547 NUDT5Q9UKK9 219 aa11.91□□□□□ -0.5
CDH5-208ENST00000614547 DHRS12A0PJE2 317 aa11.91□□□□□ -0.5
CDH5-208ENST00000614547 C7orf72A4D263 438 aa11.91□□□□□ -0.5
CDH5-208ENST00000614547 GOLGA8CPA6NN73 597 aa11.91□□□□□ -0.5
CDH5-208ENST00000614547 NFKBIEO00221 500 aa11.91□□□□□ -0.5
CDH5-208ENST00000614547 ZBTB24O43167 697 aaPredicted RBP11.91□□□□□ -0.5
CDH5-208ENST00000614547 CILPO75339 1184 aa11.91□□□□□ -0.5
CDH5-208ENST00000614547 RXRGP48443 463 aa11.91□□□□□ -0.5
CDH5-208ENST00000614547 FAM35AQ86V20 835 aa11.91□□□□□ -0.5
CDH5-208ENST00000614547 FBXO16Q8IX29 292 aaPredicted RBP11.91□□□□□ -0.5
CDH5-208ENST00000614547 FCRL3Q96P31 734 aaPredicted RBP11.91□□□□□ -0.5
CDH5-208ENST00000614547 TCF12Q99081 682 aa11.91□□□□□ -0.5
CDH5-208ENST00000614547 ZNF670Q9BS34 389 aa11.91□□□□□ -0.5
CDH5-208ENST00000614547 LHX5Q9H2C1 402 aa11.91□□□□□ -0.5
CDH5-208ENST00000614547 DPEP3Q9H4B8 488 aa11.91□□□□□ -0.5
CDH5-208ENST00000614547 UTP6Q9NYH9 597 aaKnown RBP11.91□□□□□ -0.5
CDH5-208ENST00000614547 BLOC1S6Q9UL45 172 aa11.91□□□□□ -0.5
CDH5-208ENST00000614547 CNOT6Q9ULM6 557 aaKnown RBP11.91□□□□□ -0.5
CDH5-208ENST00000614547 ST14Q9Y5Y6 855 aa11.91□□□□□ -0.5
CDH5-208ENST00000614547 LAMA2P24043 3122 aaKnown RBP11.91□□□□□ -0.5
CDH5-208ENST00000614547 LAMA3Q16787 3333 aa11.91□□□□□ -0.5
CDH5-208ENST00000614547 TTC36A6NLP5 189 aa11.91□□□□□ -0.5
CDH5-208ENST00000614547 K7EPI3 171 aa11.91□□□□□ -0.5
CDH5-208ENST00000614547 ALOX15P16050 662 aaPredicted RBP11.91□□□□□ -0.5
CDH5-208ENST00000614547 PGS1Q32NB8 556 aa11.91□□□□□ -0.5
CDH5-208ENST00000614547 FGD3Q5JSP0 725 aa11.91□□□□□ -0.5
CDH5-208ENST00000614547 CTU1Q7Z7A3 348 aaKnown RBP11.91□□□□□ -0.5
CDH5-208ENST00000614547 CAMK1DQ8IU85 385 aa11.91□□□□□ -0.5
CDH5-208ENST00000614547 SNX29P2Q8IUI4 249 aa11.91□□□□□ -0.5
CDH5-208ENST00000614547 ZNF280CQ8ND82 737 aa11.91□□□□□ -0.5
CDH5-208ENST00000614547 PABPC5Q96DU9 382 aaKnown RBP11.91□□□□□ -0.5
CDH5-208ENST00000614547 FTHL17Q9BXU8 183 aa11.91□□□□□ -0.5
CDH5-208ENST00000614547 EML4Q9HC35 981 aaKnown RBP11.91□□□□□ -0.5
CDH5-208ENST00000614547 ZDHHC7Q9NXF8 308 aa11.91□□□□□ -0.5
CDH5-208ENST00000614547 ACKR2O00590 384 aa11.9□□□□□ -0.5
CDH5-208ENST00000614547 EI24O14681 340 aa11.9□□□□□ -0.5
CDH5-208ENST00000614547 SPTLC1O15269 473 aa11.9□□□□□ -0.5
CDH5-208ENST00000614547 CBFA2T3O75081 653 aa11.9□□□□□ -0.5
CDH5-208ENST00000614547 DLGAP3O95886 979 aa11.9□□□□□ -0.5
CDH5-208ENST00000614547 HSPA1AP0DMV8 641 aaKnown RBP11.9□□□□□ -0.5
CDH5-208ENST00000614547 HSPA1BP0DMV9 641 aaKnown RBP11.9□□□□□ -0.5
CDH5-208ENST00000614547 ERCC2P18074 760 aa11.9□□□□□ -0.5
CDH5-208ENST00000614547 LIMK2P53671 638 aa11.9□□□□□ -0.5
CDH5-208ENST00000614547 DAB2P98082 770 aa11.9□□□□□ -0.5
CDH5-208ENST00000614547 LAMC2Q13753 1193 aa11.9□□□□□ -0.5
CDH5-208ENST00000614547 HSDL1Q3SXM5 330 aa11.9□□□□□ -0.5
CDH5-208ENST00000614547 PGM2L1Q6PCE3 622 aa11.9□□□□□ -0.5
CDH5-208ENST00000614547 PRR23BQ6ZRT6 265 aa11.9□□□□□ -0.5
CDH5-208ENST00000614547 ISOC1Q96CN7 298 aa11.9□□□□□ -0.5
CDH5-208ENST00000614547 MCRS1Q96EZ8 462 aa11.9□□□□□ -0.5
CDH5-208ENST00000614547 ADI1Q9BV57 179 aa11.9□□□□□ -0.5
CDH5-208ENST00000614547 NAA50Q9GZZ1 169 aaKnown RBP11.9□□□□□ -0.5
CDH5-208ENST00000614547 EPS8L2Q9H6S3 715 aa11.9□□□□□ -0.5
CDH5-208ENST00000614547 FANCEQ9HB96 536 aa11.9□□□□□ -0.5
CDH5-208ENST00000614547 PALMDQ9NP74 551 aa11.9□□□□□ -0.5
CDH5-208ENST00000614547 SNTG2Q9NY99 539 aa11.9□□□□□ -0.5
CDH5-208ENST00000614547 CPSF3Q9UKF6 684 aaKnown RBP11.9□□□□□ -0.5
CDH5-208ENST00000614547 OAZ3Q9UMX2 235 aa11.9□□□□□ -0.5
CDH5-208ENST00000614547 CEPT1Q9Y6K0 416 aa11.9□□□□□ -0.5
CDH5-208ENST00000614547 IL18RAPO95256 599 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms