RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 MFSD14CQ5VZR4 134 aa11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 RGMBQ6NW40 437 aa11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 FBXL19Q6PCT2 694 aa11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 CPNE9Q8IYJ1 553 aa11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 NDRG1Q92597 394 aaKnown RBP11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 MYLPFQ96A32 169 aa11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 LRGUKQ96M69 825 aa11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 MLPHQ9BV36 600 aaPredicted RBP11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 RETREG1Q9H6L5 497 aa11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 ZNF358Q9NW07 568 aa11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 COMMD8Q9NX08 183 aa11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 COX16Q9P0S2 106 aa11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 KCNU1A8MYU2 1149 aa11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 TMEM114B3SHH9 223 aa11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 STX16-NPEPL1H3BU86 382 aa11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 TPST1O60507 370 aa11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 EOMESO95936 686 aa11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 MT-CO1P00395 513 aa11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 SRGAP2BP0DMP2 458 aa11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 COL6A1P12109 1028 aa11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 COL6A2P12110 1019 aa11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 CTGFP29279 349 aa11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 SPRP35270 261 aaPredicted RBP11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 STT3AP46977 705 aa11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 CDH15P55291 814 aa11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 TUBB3Q13509 450 aa11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 MSANTD2Q6P1R3 559 aa11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 LAYNQ6UX15 382 aa11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 DCLK2Q8N568 766 aa11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 NPWQ8N729 165 aa11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 GRIN3AQ8TCU5 1115 aa11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 RSPH1Q8WYR4 309 aa11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 TMA16Q96EY4 203 aaKnown RBP11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 IFT43Q96FT9 208 aa11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 ARMC7Q9H6L4 198 aa11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 BFARQ9NZS9 450 aa11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 AAR2Q9Y312 384 aaKnown RBP11.01□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 CABYRO75952 493 aa11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 SERPINB8P50452 374 aa11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 NUDT2P50583 147 aa11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 HUNKP57058 714 aa11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 TBL3Q12788 808 aaKnown RBP11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 ATP1A4Q13733 1029 aa11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 KLHDC10Q6PID8 442 aa11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 TNS4Q8IZW8 715 aa11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 SERBP1Q8NC51 408 aaKnown RBP eCLIP11□□□□□ -0.656e-20■■□□□ 11.6
SENP3-EIF4A1-201ENST00000614237 TMIGD2Q96BF3 282 aa11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 FCRL3Q96P31 734 aaPredicted RBP11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 KCNK16Q96T55 309 aa11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 SPC25Q9HBM1 224 aa11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 OR12D3Q9UGF7 316 aa11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 VANGL2Q9ULK5 521 aa11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 FAM92AA1XBS5 289 aa11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 MEIS3P2A8K0S8 358 aa11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 F8W8V4 182 aa11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 TIMM44O43615 452 aa11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 TM7SF2O76062 418 aa11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 AMHP03971 560 aa11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 ASLP04424 464 aa11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 SERPINE1P05121 402 aa11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 APOA4P06727 396 aa11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 NCAM1P13591 858 aa11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 NUMBP49757 651 aa11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 SESN2P58004 480 aaPredicted RBP11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 MTA1Q13330 715 aa11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 PCLAFQ15004 111 aa11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 TRMT5Q32P41 509 aaKnown RBP11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 ANKRD20A4Q4UJ75 823 aa11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 NAPEPLDQ6IQ20 393 aa11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 SAPCD2Q86UD0 394 aa11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 PHTF2Q8N3S3 785 aa11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 DIS3LQ8TF46 1054 aaKnown RBP11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 PPWD1Q96BP3 646 aaKnown RBP11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 FAM192AQ9GZU8 254 aa11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 S100A14Q9HCY8 104 aa11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 DNAJB4Q9UDY4 337 aa11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 MYO18AQ92614 2054 aaKnown RBP11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 TNPO2O14787 897 aaKnown RBP11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 IRAK2O43187 625 aa11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 CA12O43570 354 aa11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 OAZ2O95190 189 aa11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 USP17L7P0C7H9 530 aa11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 IGFBP6P24592 240 aaPredicted RBP11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 PRDX6P30041 224 aa11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 ADRA1AP35348 466 aa11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 ACTR3P61158 418 aa11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 RNF111Q6ZNA4 994 aa11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 PID1Q7Z2X4 250 aa11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 RNF168Q8IYW5 571 aaPredicted RBP11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 PPP4R1Q8TF05 950 aa11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 FUBP3Q96I24 572 aaKnown RBP eCLIP11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 AGO3Q9H9G7 860 aaKnown RBP11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 ARNT2Q9HBZ2 717 aa11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 RGS18Q9NS28 235 aa11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 DDIT4Q9NX09 232 aa11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 SEPT10Q9P0V9 454 aa11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 PADI3Q9ULW8 664 aa11□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 ZNF195O14628 629 aa10.99□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 TPP1O14773 563 aa10.99□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 ZBTB24O43167 697 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms