RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 FAM84AQ96KN4 292 aa8.85□□□□□ -0.99
TTC28-208ENST00000612946 CDK5RAP1Q96SZ6 601 aaKnown RBP8.85□□□□□ -0.99
TTC28-208ENST00000612946 RCOR3Q9P2K3 495 aaPredicted RBP8.85□□□□□ -0.99
TTC28-208ENST00000612946 PCDHGB6Q9Y5F9 930 aa8.85□□□□□ -0.99
TTC28-208ENST00000612946 OVOS2A0A0J9YW53 1432 aa8.85□□□□□ -0.99
TTC28-208ENST00000612946 OVOS2Q6IE36 1432 aa8.85□□□□□ -0.99
TTC28-208ENST00000612946 CCR3P51677 355 aa8.85□□□□□ -0.99
TTC28-208ENST00000612946 TMEM132DQ14C87 1099 aa8.85□□□□□ -0.99
TTC28-208ENST00000612946 ALFQ53S48 1182 aa8.85□□□□□ -0.99
TTC28-208ENST00000612946 WDR49Q8IV35 697 aa8.85□□□□□ -0.99
TTC28-208ENST00000612946 OR5J2Q8NH18 312 aa8.85□□□□□ -0.99
TTC28-208ENST00000612946 TMC2Q8TDI7 906 aa8.85□□□□□ -0.99
TTC28-208ENST00000612946 PCDHA11Q9Y5I1 949 aa8.85□□□□□ -0.99
TTC28-208ENST00000612946 ADAMDEC1O15204 470 aa8.85□□□□□ -0.99
TTC28-208ENST00000612946 ATP5F1P24539 256 aaPredicted RBP8.85□□□□□ -0.99
TTC28-208ENST00000612946 NOS3P29474 1203 aa8.85□□□□□ -0.99
TTC28-208ENST00000612946 STYK1Q6J9G0 422 aa8.85□□□□□ -0.99
TTC28-208ENST00000612946 DEF8Q6ZN54 512 aa8.85□□□□□ -0.99
TTC28-208ENST00000612946 MAGED1Q9Y5V3 778 aaPredicted RBP8.85□□□□□ -0.99
TTC28-208ENST00000612946 RP2O75695 350 aa8.85□□□□□ -0.99
TTC28-208ENST00000612946 IL6STP40189 918 aaPredicted RBP8.85□□□□□ -0.99
TTC28-208ENST00000612946 MCAMP43121 646 aa8.85□□□□□ -0.99
TTC28-208ENST00000612946 PRKG2Q13237 762 aa8.85□□□□□ -0.99
TTC28-208ENST00000612946 BAIAP2L2Q6UXY1 529 aa8.85□□□□□ -0.99
TTC28-208ENST00000612946 SLC30A8Q8IWU4 369 aa8.85□□□□□ -0.99
TTC28-208ENST00000612946 SLC9A7Q96T83 725 aa8.85□□□□□ -0.99
TTC28-208ENST00000612946 MMP27Q9H306 513 aa8.85□□□□□ -0.99
TTC28-208ENST00000612946 A0A096LPK6 155 aa8.85□□□□□ -0.99
TTC28-208ENST00000612946 PLD2O14939 933 aa8.85□□□□□ -0.99
TTC28-208ENST00000612946 RPS9P46781 194 aaKnown RBP8.85□□□□□ -0.99
TTC28-208ENST00000612946 AP2S1P53680 142 aaPredicted RBP8.85□□□□□ -0.99
TTC28-208ENST00000612946 PRKCEQ02156 737 aa8.85□□□□□ -0.99
TTC28-208ENST00000612946 FSCN1Q16658 493 aaKnown RBP8.85□□□□□ -0.99
TTC28-208ENST00000612946 BTBD8Q5XKL5 378 aa8.85□□□□□ -0.99
TTC28-208ENST00000612946 FBXO39Q8N4B4 442 aa8.85□□□□□ -0.99
TTC28-208ENST00000612946 SLC16A4O15374 487 aa8.85□□□□□ -0.99
TTC28-208ENST00000612946 GUCA1AP43080 201 aaPredicted RBP8.85□□□□□ -0.99
TTC28-208ENST00000612946 TBC1D15Q8TC07 691 aa8.85□□□□□ -0.99
TTC28-208ENST00000612946 ANKEF1Q9NU02 776 aa8.85□□□□□ -0.99
TTC28-208ENST00000612946 PRAMEF33A0A0G2JMD5 474 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 HTR3EA5X5Y0 456 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 PRAMEF10O60809 474 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 ACTL9Q8TC94 416 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 JPH1Q9HDC5 661 aaPredicted RBP8.84□□□□□ -0.99
TTC28-208ENST00000612946 TFCP2L1Q9NZI6 479 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 ZNF99A8MXY4 864 aaPredicted RBP8.84□□□□□ -0.99
TTC28-208ENST00000612946 CHRNA2Q15822 529 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 SULT1C3Q6IMI6 304 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 AFTPHQ6ULP2 937 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 DENND5BQ6ZUT9 1274 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 HERC6Q8IVU3 1022 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 ABI1Q8IZP0 508 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 KAT2AQ92830 837 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 BBS4Q96RK4 519 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 TMEM47Q9BQJ4 181 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 SLC9A8Q9Y2E8 581 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 CPS1P31327 1500 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 ZW10O43264 779 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 AP5Z1O43299 807 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 GMFGO60234 142 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 FAIMQ9NVQ4 179 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 KLHL11Q9NVR0 708 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 ARHGAP20Q9P2F6 1191 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 RPS6KB2Q9UBS0 482 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 RGS17Q9UGC6 210 aaPredicted RBP8.84□□□□□ -0.99
TTC28-208ENST00000612946 TRAF6Q9Y4K3 522 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 FGFR3P22607 806 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 CRHR1P34998 444 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 GCNT1Q02742 428 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 PYHIN1Q6K0P9 492 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 PHC2Q8IXK0 858 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 CENPSQ8N2Z9 138 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 SLC7A14Q8TBB6 771 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 QRFPRQ96P65 431 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 UNC93B1Q9H1C4 597 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 PRDM5Q9NQX1 630 aaPredicted RBP8.84□□□□□ -0.99
TTC28-208ENST00000612946 B3GNT3Q9Y2A9 372 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 PMF1-BGLAPU3KQ54 211 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 PNPLA6Q8IY17 1366 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 RBAK-RBAKDNI3L0D1 243 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 NMT2O60551 498 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 SLC7A1P30825 629 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 USP4Q13107 963 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 CBLBQ13191 982 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 GMCL1Q96IK5 515 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 MBOAT7Q96N66 472 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 ZNF302Q9NR11 478 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 MOSPD1Q9UJG1 213 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 ZNF112Q9UJU3 913 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 CAPN8A6NHC0 703 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 DNM1LO00429 736 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 PSIP1O75475 530 aaKnown RBP8.84□□□□□ -0.99
TTC28-208ENST00000612946 ETV1P50549 477 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 ALDH3A2P51648 485 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 AQP4P55087 323 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 IL17REQ8NFR9 667 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 MAFIPQ8WZ33 124 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 CGREF1Q99674 301 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 CYP3A43Q9HB55 503 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 POLR3BQ9NW08 1133 aaPredicted RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms