RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 CELA2BP08218 269 aaPredicted RBP23.87■■□□□ 1.41
MMP28-203ENST00000612672 RABIFP47224 123 aa23.87■■□□□ 1.41
MMP28-203ENST00000612672 SERPINH1P50454 418 aaKnown RBP23.87■■□□□ 1.41
MMP28-203ENST00000612672 CCNHP51946 323 aaPredicted RBP23.87■■□□□ 1.41
MMP28-203ENST00000612672 PFN3P60673 137 aa23.87■■□□□ 1.41
MMP28-203ENST00000612672 SRSF6Q13247 344 aaKnown RBP23.87■■□□□ 1.41
MMP28-203ENST00000612672 CLEC14AQ86T13 490 aa23.87■■□□□ 1.41
MMP28-203ENST00000612672 EXD3Q8N9H8 876 aa23.87■■□□□ 1.41
MMP28-203ENST00000612672 ZNF397Q8NF99 534 aaPredicted RBP23.87■■□□□ 1.41
MMP28-203ENST00000612672 FAM174AQ8TBP5 190 aa23.87■■□□□ 1.41
MMP28-203ENST00000612672 SHC3Q92529 594 aa23.87■■□□□ 1.41
MMP28-203ENST00000612672 PPP1R16AQ96I34 528 aa23.87■■□□□ 1.41
MMP28-203ENST00000612672 TBCBQ99426 244 aa23.87■■□□□ 1.41
MMP28-203ENST00000612672 C1QTNF2Q9BXJ5 285 aa23.87■■□□□ 1.41
MMP28-203ENST00000612672 SALL4Q9UJQ4 1053 aa23.87■■□□□ 1.41
MMP28-203ENST00000612672 ATP6V1DQ9Y5K8 247 aa23.87■■□□□ 1.41
MMP28-203ENST00000612672 H3BM21 787 aa23.86■■□□□ 1.41
MMP28-203ENST00000612672 AP1G1O43747 822 aa23.86■■□□□ 1.41
MMP28-203ENST00000612672 SULT1E1P49888 294 aa23.86■■□□□ 1.41
MMP28-203ENST00000612672 CCDC15Q0P6D6 951 aa23.86■■□□□ 1.41
MMP28-203ENST00000612672 NR0B2Q15466 257 aa23.86■■□□□ 1.41
MMP28-203ENST00000612672 TRNP1Q6NT89 227 aa23.86■■□□□ 1.41
MMP28-203ENST00000612672 FOXR2Q6PJQ5 311 aa23.86■■□□□ 1.41
MMP28-203ENST00000612672 OR6K2Q8NGY2 324 aa23.86■■□□□ 1.41
MMP28-203ENST00000612672 NT5C3BQ969T7 300 aa23.86■■□□□ 1.41
MMP28-203ENST00000612672 FEM1CQ96JP0 617 aa23.86■■□□□ 1.41
MMP28-203ENST00000612672 TIGD1Q96MW7 591 aa23.86■■□□□ 1.41
MMP28-203ENST00000612672 HEPHQ9BQS7 1158 aa23.86■■□□□ 1.41
MMP28-203ENST00000612672 LRRC61Q9BV99 259 aa23.86■■□□□ 1.41
MMP28-203ENST00000612672 SRRTQ9BXP5 876 aaKnown RBP23.86■■□□□ 1.41
MMP28-203ENST00000612672 CLPBQ9H078 707 aa23.86■■□□□ 1.41
MMP28-203ENST00000612672 WDCPQ9H6R7 721 aa23.86■■□□□ 1.41
MMP28-203ENST00000612672 RELNP78509 3460 aa23.86■■□□□ 1.41
MMP28-203ENST00000612672 TNFSF15O95150 251 aa23.85■■□□□ 1.41
MMP28-203ENST00000612672 IGFALSP35858 605 aa23.85■■□□□ 1.41
MMP28-203ENST00000612672 MORC3Q14149 939 aa23.85■■□□□ 1.41
MMP28-203ENST00000612672 ZSCAN23Q3MJ62 389 aa23.85■■□□□ 1.41
MMP28-203ENST00000612672 BRMS1LQ5PSV4 323 aa23.85■■□□□ 1.41
MMP28-203ENST00000612672 NYAP1Q6ZVC0 841 aa23.85■■□□□ 1.41
MMP28-203ENST00000612672 ENOSF1Q7L5Y1 443 aa23.85■■□□□ 1.41
MMP28-203ENST00000612672 B3GNT8Q7Z7M8 397 aa23.85■■□□□ 1.41
MMP28-203ENST00000612672 LENG8Q96PV6 779 aaPredicted RBP23.85■■□□□ 1.41
MMP28-203ENST00000612672 SPON2Q9BUD6 331 aa23.85■■□□□ 1.41
MMP28-203ENST00000612672 TM6SF2Q9BZW4 377 aa23.85■■□□□ 1.41
MMP28-203ENST00000612672 ZDHHC6Q9H6R6 413 aa23.85■■□□□ 1.41
MMP28-203ENST00000612672 EVA1BQ9NVM1 165 aa23.85■■□□□ 1.41
MMP28-203ENST00000612672 RABGEF1Q9UJ41 708 aa23.85■■□□□ 1.41
MMP28-203ENST00000612672 BIN1O00499 593 aa23.84■■□□□ 1.41
MMP28-203ENST00000612672 FPGTO14772 594 aa23.84■■□□□ 1.41
MMP28-203ENST00000612672 WISP1O95388 367 aa23.84■■□□□ 1.41
MMP28-203ENST00000612672 OR1E1P30953 314 aa23.84■■□□□ 1.41
MMP28-203ENST00000612672 RECQLP46063 649 aaPredicted RBP23.84■■□□□ 1.41
MMP28-203ENST00000612672 DNA2P51530 1060 aa23.84■■□□□ 1.41
MMP28-203ENST00000612672 RNASE9P60153 205 aaKnown RBP23.84■■□□□ 1.41
MMP28-203ENST00000612672 LINC00303Q3SY05 128 aa23.84■■□□□ 1.41
MMP28-203ENST00000612672 CARD16Q5EG05 197 aa23.84■■□□□ 1.41
MMP28-203ENST00000612672 LRRC73Q5JTD7 316 aa23.84■■□□□ 1.41
MMP28-203ENST00000612672 CCDC81Q6ZN84 652 aa23.84■■□□□ 1.41
MMP28-203ENST00000612672 SLC47A2Q86VL8 602 aa23.84■■□□□ 1.41
MMP28-203ENST00000612672 PCDH20Q8N6Y1 951 aaKnown RBP23.84■■□□□ 1.41
MMP28-203ENST00000612672 PGAP3Q96FM1 320 aaPredicted RBP23.84■■□□□ 1.41
MMP28-203ENST00000612672 IL12RB2Q99665 862 aa23.84■■□□□ 1.41
MMP28-203ENST00000612672 CCDC3Q9BQI4 270 aa23.84■■□□□ 1.41
MMP28-203ENST00000612672 TRIM4Q9C037 500 aa23.84■■□□□ 1.41
MMP28-203ENST00000612672 CEP44Q9C0F1 390 aa23.84■■□□□ 1.41
MMP28-203ENST00000612672 ATP13A1Q9HD20 1204 aa23.84■■□□□ 1.41
MMP28-203ENST00000612672 SIX2Q9NPC8 291 aa23.84■■□□□ 1.41
MMP28-203ENST00000612672 NDFIP2Q9NV92 336 aa23.84■■□□□ 1.41
MMP28-203ENST00000612672 APOBEC3BQ9UH17 382 aaKnown RBP23.84■■□□□ 1.41
MMP28-203ENST00000612672 IPO11Q9UI26 975 aaKnown RBP23.84■■□□□ 1.41
MMP28-203ENST00000612672 SPENQ96T58 3664 aaKnown RBP23.84■■□□□ 1.41
MMP28-203ENST00000612672 ILVBLA1L0T0 632 aa23.83■■□□□ 1.41
MMP28-203ENST00000612672 TPP1O14773 563 aa23.83■■□□□ 1.41
MMP28-203ENST00000612672 ARHGAP6O43182 974 aa23.83■■□□□ 1.41
MMP28-203ENST00000612672 TCEA3O75764 348 aa23.83■■□□□ 1.41
MMP28-203ENST00000612672 CLCN1P35523 988 aa23.83■■□□□ 1.41
MMP28-203ENST00000612672 ACVRL1P37023 503 aa23.83■■□□□ 1.41
MMP28-203ENST00000612672 ADKP55263 362 aaKnown RBP23.83■■□□□ 1.41
MMP28-203ENST00000612672 KCNC4Q03721 635 aa23.83■■□□□ 1.41
MMP28-203ENST00000612672 MTA1Q13330 715 aa23.83■■□□□ 1.41
MMP28-203ENST00000612672 ARL13BQ3SXY8 428 aa23.83■■□□□ 1.41
MMP28-203ENST00000612672 RAB6CQ53S08 254 aa23.83■■□□□ 1.41
MMP28-203ENST00000612672 PRRT3Q5FWE3 981 aa23.83■■□□□ 1.41
MMP28-203ENST00000612672 C6orf132Q5T0Z8 1188 aa23.83■■□□□ 1.41
MMP28-203ENST00000612672 PHACTR4Q8IZ21 702 aa23.83■■□□□ 1.41
MMP28-203ENST00000612672 WDR36Q8NI36 951 aaKnown RBP23.83■■□□□ 1.41
MMP28-203ENST00000612672 RAB6CQ9H0N0 254 aa23.83■■□□□ 1.41
MMP28-203ENST00000612672 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.83■■□□□ 1.41
MMP28-203ENST00000612672 APEX2Q9UBZ4 518 aa23.83■■□□□ 1.41
MMP28-203ENST00000612672 BICDL2A1A5D9 508 aa23.82■■□□□ 1.4
MMP28-203ENST00000612672 C16orf96A6NNT2 1141 aa23.82■■□□□ 1.4
MMP28-203ENST00000612672 NTN3O00634 580 aaPredicted RBP23.82■■□□□ 1.4
MMP28-203ENST00000612672 SRGAP2O75044 1071 aa23.82■■□□□ 1.4
MMP28-203ENST00000612672 GNA14O95837 355 aa23.82■■□□□ 1.4
MMP28-203ENST00000612672 FLT3P36888 993 aa23.82■■□□□ 1.4
MMP28-203ENST00000612672 DEUP1Q05D60 604 aa23.82■■□□□ 1.4
MMP28-203ENST00000612672 BNIPLQ7Z465 357 aa23.82■■□□□ 1.4
MMP28-203ENST00000612672 CENPTQ96BT3 561 aa23.82■■□□□ 1.4
MMP28-203ENST00000612672 GRAMD1AQ96CP6 724 aa23.82■■□□□ 1.4
MMP28-203ENST00000612672 NCKIPSDQ9NZQ3 722 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms