RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 PRDM5Q9NQX1 630 aaPredicted RBP10.57□□□□□ -0.72
PABPC1-224ENST00000610907 MRGBPQ9NV56 204 aa10.57□□□□□ -0.72
PABPC1-224ENST00000610907 SLC7A8Q9UHI5 535 aa10.57□□□□□ -0.72
PABPC1-224ENST00000610907 TLL2Q9Y6L7 1015 aa10.57□□□□□ -0.72
PABPC1-224ENST00000610907 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.57□□□□□ -0.72
PABPC1-224ENST00000610907 CASP8AP2Q9UKL3 1982 aa10.57□□□□□ -0.72
PABPC1-224ENST00000610907 A0A088AWK7 358 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 FAM95CA0A1B0GW59 222 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 MOXD2PA6NHM9 499 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 MSI1O43347 362 aaKnown RBP10.56□□□□□ -0.72
PABPC1-224ENST00000610907 NPHS1O60500 1241 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 TBX10O75333 385 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 KRT36O76013 467 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 PEX11BO96011 259 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 THRAP10827 490 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 CKBP12277 381 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 NCF2P19878 526 aaPredicted RBP10.56□□□□□ -0.72
PABPC1-224ENST00000610907 CCND3P30281 292 aaPredicted RBP10.56□□□□□ -0.72
PABPC1-224ENST00000610907 WNT3AP56704 352 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 DNAJB13P59910 316 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 PRKCZQ05513 592 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 MRPL58Q14197 206 aaKnown RBP10.56□□□□□ -0.72
PABPC1-224ENST00000610907 BTG3Q14201 252 aaPredicted RBP10.56□□□□□ -0.72
PABPC1-224ENST00000610907 NAA25Q14CX7 972 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 TRIP4Q15650 581 aaPredicted RBP10.56□□□□□ -0.72
PABPC1-224ENST00000610907 CNGA3Q16281 694 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 MUM1Q2TAK8 710 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 PIK3R6Q5UE93 754 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 MARC1Q5VT66 337 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 SEL1L3Q68CR1 1132 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 NEPROQ6NW34 567 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 ESRP1Q6NXG1 681 aaKnown RBP10.56□□□□□ -0.72
PABPC1-224ENST00000610907 PGM2L1Q6PCE3 622 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 NAPRTQ6XQN6 538 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 LRRC74BQ6ZQY2 392 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 C14orf80Q86SX3 495 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 RTN4RL1Q86UN2 441 aaPredicted RBP10.56□□□□□ -0.72
PABPC1-224ENST00000610907 ZNF280BQ86YH2 543 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 ZNF683Q8IZ20 524 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 KIRREL3Q8IZU9 778 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 FSTL5Q8N475 847 aaPredicted RBP10.56□□□□□ -0.72
PABPC1-224ENST00000610907 TEX26Q8N6G2 289 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 FBXO27Q8NI29 283 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 JADE3Q92613 823 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 CCDC126Q96EE4 140 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 ZNF333Q96JL9 665 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 BTN2A3PQ96KV6 586 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 FAM193BQ96PV7 902 aaPredicted RBP10.56□□□□□ -0.72
PABPC1-224ENST00000610907 MRPL57Q9BQC6 102 aaKnown RBP10.56□□□□□ -0.72
PABPC1-224ENST00000610907 RTKNQ9BST9 563 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 ARHGAP39Q9C0H5 1083 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 NOL6Q9H6R4 1146 aaKnown RBP10.56□□□□□ -0.72
PABPC1-224ENST00000610907 TCF7L2Q9NQB0 619 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 TRMT13Q9NUP7 481 aaKnown RBP10.56□□□□□ -0.72
PABPC1-224ENST00000610907 ABI2Q9NYB9 513 aaPredicted RBP10.56□□□□□ -0.72
PABPC1-224ENST00000610907 FBXO5Q9UKT4 447 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 ARHGAP26Q9UNA1 814 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 MAGED2Q9UNF1 606 aaPredicted RBP10.56□□□□□ -0.72
PABPC1-224ENST00000610907 PLXNA3P51805 1871 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 GOLGA8QA0A0J9YX86 632 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 GOLGA8OA6NCC3 632 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 DRGXA6NNA5 263 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 GOLGA8NF8WBI6 632 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 PMPCBO75439 489 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 TADA2AO75478 443 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 MOCS2O96007 188 aaPredicted RBP10.56□□□□□ -0.72
PABPC1-224ENST00000610907 SBK3P0C264 359 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 PRKAR2AP13861 404 aaKnown RBP10.56□□□□□ -0.72
PABPC1-224ENST00000610907 YWHAQP27348 245 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 ARNTP27540 789 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 SLC26A3P40879 764 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 OR1G1P47890 313 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 GRIA4P48058 902 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 PGFP49763 221 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 SERPINH1P50454 418 aaKnown RBP10.56□□□□□ -0.72
PABPC1-224ENST00000610907 CLCN5P51795 746 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 KPNA1P52294 538 aaPredicted RBP10.56□□□□□ -0.72
PABPC1-224ENST00000610907 ACLYP53396 1101 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 SLC12A2P55011 1212 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 YBEYP58557 167 aaPredicted RBP10.56□□□□□ -0.72
PABPC1-224ENST00000610907 RING1Q06587 406 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 TRIM32Q13049 653 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 KLF10Q13118 480 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 BLMHQ13867 455 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 SMAD1Q15797 465 aaKnown RBP10.56□□□□□ -0.72
PABPC1-224ENST00000610907 SLC14A2Q15849 920 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 MS4A13Q5J8X5 152 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 CLLU1OSQ5K130 101 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 MAP3K21Q5TCX8 1036 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 C1orf146Q5VVC0 180 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 LRRC8EQ6NSJ5 796 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 RIPOR1Q6ZS17 1223 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 ACAD11Q709F0 780 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 PIWIL4Q7Z3Z4 852 aaKnown RBP10.56□□□□□ -0.72
PABPC1-224ENST00000610907 APLFQ8IW19 511 aaPredicted RBP10.56□□□□□ -0.72
PABPC1-224ENST00000610907 CENPLQ8N0S6 344 aaPredicted RBP10.56□□□□□ -0.72
PABPC1-224ENST00000610907 CPSF7Q8N684 471 aaKnown RBP10.56□□□□□ -0.72
PABPC1-224ENST00000610907 ACVR1CQ8NER5 493 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 PEX13Q92968 403 aa10.56□□□□□ -0.72
PABPC1-224ENST00000610907 TSPAN17Q96FV3 270 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms