RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 SOWAHDA6NJG2 315 aa12.95□□□□□ -0.34
CD9-212ENST00000610354 LRRC72A6NJI9 287 aa12.95□□□□□ -0.34
CD9-212ENST00000610354 ARHGAP33O14559 1287 aa12.95□□□□□ -0.34
CD9-212ENST00000610354 BCAT2O15382 392 aaPredicted RBP12.95□□□□□ -0.34
CD9-212ENST00000610354 SLC7A4O43246 635 aa12.95□□□□□ -0.34
CD9-212ENST00000610354 PEX11BO96011 259 aa12.95□□□□□ -0.34
CD9-212ENST00000610354 CD27P26842 260 aa12.95□□□□□ -0.34
CD9-212ENST00000610354 GJC1P36383 396 aa12.95□□□□□ -0.34
CD9-212ENST00000610354 ARL4AP40617 200 aa12.95□□□□□ -0.34
CD9-212ENST00000610354 MAGEA1P43355 309 aa12.95□□□□□ -0.34
CD9-212ENST00000610354 RECQLP46063 649 aaPredicted RBP12.95□□□□□ -0.34
CD9-212ENST00000610354 CCR5P51681 352 aa12.95□□□□□ -0.34
CD9-212ENST00000610354 CDH6P55285 790 aa12.95□□□□□ -0.34
CD9-212ENST00000610354 GEMIN4P57678 1058 aaKnown RBP12.95□□□□□ -0.34
CD9-212ENST00000610354 SFSWAPQ12872 951 aaKnown RBP12.95□□□□□ -0.34
CD9-212ENST00000610354 DPYSL3Q14195 570 aa12.95□□□□□ -0.34
CD9-212ENST00000610354 PUM1Q14671 1186 aaKnown RBP eCLIP12.95□□□□□ -0.34
CD9-212ENST00000610354 HADHQ16836 314 aaKnown RBP12.95□□□□□ -0.34
CD9-212ENST00000610354 LAYNQ6UX15 382 aa12.95□□□□□ -0.34
CD9-212ENST00000610354 RAD9BQ6WBX8 426 aa12.95□□□□□ -0.34
CD9-212ENST00000610354 PARS2Q7L3T8 475 aaKnown RBP12.95□□□□□ -0.34
CD9-212ENST00000610354 TMEM139Q8IV31 216 aa12.95□□□□□ -0.34
CD9-212ENST00000610354 PCDH19Q8TAB3 1148 aa12.95□□□□□ -0.34
CD9-212ENST00000610354 RFFLQ8WZ73 363 aa12.95□□□□□ -0.34
CD9-212ENST00000610354 RTKNQ9BST9 563 aa12.95□□□□□ -0.34
CD9-212ENST00000610354 HDAC8Q9BY41 377 aa12.95□□□□□ -0.34
CD9-212ENST00000610354 ZDHHC6Q9H6R6 413 aa12.95□□□□□ -0.34
CD9-212ENST00000610354 UBA2Q9UBT2 640 aaPredicted RBP12.95□□□□□ -0.34
CD9-212ENST00000610354 CDV3Q9UKY7 258 aaKnown RBP12.95□□□□□ -0.34
CD9-212ENST00000610354 HYOU1Q9Y4L1 999 aa12.95□□□□□ -0.34
CD9-212ENST00000610354 PCNX2A6NKB5 2137 aa12.94□□□□□ -0.34
CD9-212ENST00000610354 TBC1D3DA0A087WVF3 549 aa12.94□□□□□ -0.34
CD9-212ENST00000610354 TBC1D3IA0A087WXS9 549 aa12.94□□□□□ -0.34
CD9-212ENST00000610354 TBC1D3EA0A087X179 549 aa12.94□□□□□ -0.34
CD9-212ENST00000610354 TBC1D3KA0A087X1G2 549 aa12.94□□□□□ -0.34
CD9-212ENST00000610354 A0A1W2PPC4 97 aa12.94□□□□□ -0.34
CD9-212ENST00000610354 TBC1D3FA6NER0 549 aaPredicted RBP12.94□□□□□ -0.34
CD9-212ENST00000610354 TBC1D3LB9A6J9 549 aa12.94□□□□□ -0.34
CD9-212ENST00000610354 DFFAO00273 331 aa12.94□□□□□ -0.34
CD9-212ENST00000610354 KRIT1O00522 736 aa12.94□□□□□ -0.34
CD9-212ENST00000610354 MUSKO15146 869 aa12.94□□□□□ -0.34
CD9-212ENST00000610354 SPINT1O43278 529 aa12.94□□□□□ -0.34
CD9-212ENST00000610354 LATO43561 262 aa12.94□□□□□ -0.34
CD9-212ENST00000610354 GJB3O75712 270 aa12.94□□□□□ -0.34
CD9-212ENST00000610354 POP4O95707 220 aaKnown RBP12.94□□□□□ -0.34
CD9-212ENST00000610354 WNT1P04628 370 aa12.94□□□□□ -0.34
CD9-212ENST00000610354 TBC1D3HP0C7X1 549 aa12.94□□□□□ -0.34
CD9-212ENST00000610354 CDC25BP30305 580 aa12.94□□□□□ -0.34
CD9-212ENST00000610354 ARHGAP25P42331 645 aa12.94□□□□□ -0.34
CD9-212ENST00000610354 MAPK8P45983 427 aa12.94□□□□□ -0.34
CD9-212ENST00000610354 CSNK1EP49674 416 aaKnown RBP12.94□□□□□ -0.34
CD9-212ENST00000610354 RHOAP61586 193 aa12.94□□□□□ -0.34
CD9-212ENST00000610354 SNRPD1P62314 119 aaKnown RBP12.94□□□□□ -0.34
CD9-212ENST00000610354 KRT81Q14533 505 aa12.94□□□□□ -0.34
CD9-212ENST00000610354 TBC1D3GQ6DHY5 549 aa12.94□□□□□ -0.34
CD9-212ENST00000610354 TBC1D3CQ6IPX1 549 aa12.94□□□□□ -0.34
CD9-212ENST00000610354 ERN2Q76MJ5 926 aaKnown RBP12.94□□□□□ -0.34
CD9-212ENST00000610354 RABEPKQ7Z6M1 372 aa12.94□□□□□ -0.34
CD9-212ENST00000610354 RHOT2Q8IXI1 618 aa12.94□□□□□ -0.34
CD9-212ENST00000610354 CCDC170Q8IYT3 715 aa12.94□□□□□ -0.34
CD9-212ENST00000610354 TBC1D3Q8IZP1 549 aaPredicted RBP12.94□□□□□ -0.34
CD9-212ENST00000610354 RYBPQ8N488 228 aaPredicted RBP12.94□□□□□ -0.34
CD9-212ENST00000610354 LZTR1Q8N653 840 aa12.94□□□□□ -0.34
CD9-212ENST00000610354 PQLC3Q8N755 202 aa12.94□□□□□ -0.34
CD9-212ENST00000610354 CASKIN2Q8WXE0 1202 aa12.94□□□□□ -0.34
CD9-212ENST00000610354 RAPGEF5Q92565 580 aa12.94□□□□□ -0.34
CD9-212ENST00000610354 FAF2Q96CS3 445 aa12.94□□□□□ -0.34
CD9-212ENST00000610354 EXOC2Q96KP1 924 aa12.94□□□□□ -0.34
CD9-212ENST00000610354 SLC6A18Q96N87 628 aa12.94□□□□□ -0.34
CD9-212ENST00000610354 TMEM9BQ9NQ34 198 aa12.94□□□□□ -0.34
CD9-212ENST00000610354 RCOR3Q9P2K3 495 aaPredicted RBP12.94□□□□□ -0.34
CD9-212ENST00000610354 SUSD2Q9UGT4 822 aa12.94□□□□□ -0.34
CD9-212ENST00000610354 IPO11Q9UI26 975 aaKnown RBP12.94□□□□□ -0.34
CD9-212ENST00000610354 SALL4Q9UJQ4 1053 aa12.94□□□□□ -0.34
CD9-212ENST00000610354 ZFR2Q9UPR6 939 aaKnown RBP12.94□□□□□ -0.34
CD9-212ENST00000610354 PCDHA13Q9Y5I0 950 aa12.94□□□□□ -0.34
CD9-212ENST00000610354 LRRK1Q38SD2 2015 aa12.94□□□□□ -0.34
CD9-212ENST00000610354 A0A1B0GVT2 93 aa12.93□□□□□ -0.34
CD9-212ENST00000610354 A0A1W2PR77 199 aa12.93□□□□□ -0.34
CD9-212ENST00000610354 C3orf70A6NLC5 250 aaPredicted RBP12.93□□□□□ -0.34
CD9-212ENST00000610354 BUB1BO60566 1050 aaPredicted RBP12.93□□□□□ -0.34
CD9-212ENST00000610354 MAFKO60675 156 aa12.93□□□□□ -0.34
CD9-212ENST00000610354 RNGTTO60942 597 aaKnown RBP12.93□□□□□ -0.34
CD9-212ENST00000610354 UGT2B4P06133 528 aa12.93□□□□□ -0.34
CD9-212ENST00000610354 GNSP15586 552 aa12.93□□□□□ -0.34
CD9-212ENST00000610354 KDELR1P24390 212 aa12.93□□□□□ -0.34
CD9-212ENST00000610354 ITGB7P26010 798 aa12.93□□□□□ -0.34
CD9-212ENST00000610354 ABL2P42684 1182 aa12.93□□□□□ -0.34
CD9-212ENST00000610354 HADHBP55084 474 aaKnown RBP12.93□□□□□ -0.34
CD9-212ENST00000610354 IL10RBQ08334 325 aa12.93□□□□□ -0.34
CD9-212ENST00000610354 GRIK2Q13002 908 aa12.93□□□□□ -0.34
CD9-212ENST00000610354 ANKRD20A8PQ5CZ79 823 aa12.93□□□□□ -0.34
CD9-212ENST00000610354 NCBP2-AS2Q69YL0 99 aa12.93□□□□□ -0.34
CD9-212ENST00000610354 TMCO3Q6UWJ1 677 aa12.93□□□□□ -0.34
CD9-212ENST00000610354 TSEN2Q8NCE0 465 aaKnown RBP12.93□□□□□ -0.34
CD9-212ENST00000610354 KLK6Q92876 244 aa12.93□□□□□ -0.34
CD9-212ENST00000610354 GDAP1L1Q96MZ0 367 aa12.93□□□□□ -0.34
CD9-212ENST00000610354 KLHL32Q96NJ5 620 aa12.93□□□□□ -0.34
CD9-212ENST00000610354 GTPBP2Q9BX10 602 aaKnown RBP12.93□□□□□ -0.34
CD9-212ENST00000610354 KDM4CQ9H3R0 1056 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms