RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 INO80CQ6PI98 192 aaPredicted RBP4.56□□□□□ -1.68
SMCHD1-213ENST00000609587 ATF7IPQ6VMQ6 1270 aa4.56□□□□□ -1.68
SMCHD1-213ENST00000609587 C1orf122Q6ZSJ8 110 aa4.56□□□□□ -1.68
SMCHD1-213ENST00000609587 MOB3CQ70IA8 216 aa4.56□□□□□ -1.68
SMCHD1-213ENST00000609587 TBC1D1Q86TI0 1168 aaPredicted RBP4.56□□□□□ -1.68
SMCHD1-213ENST00000609587 TADA2BQ86TJ2 420 aa4.56□□□□□ -1.68
SMCHD1-213ENST00000609587 FAM160B2Q86V87 743 aa4.56□□□□□ -1.68
SMCHD1-213ENST00000609587 LRRC57Q8N9N7 239 aa4.56□□□□□ -1.68
SMCHD1-213ENST00000609587 C11orf65Q8NCR3 313 aa4.56□□□□□ -1.68
SMCHD1-213ENST00000609587 TDRD7Q8NHU6 1098 aaKnown RBP4.56□□□□□ -1.68
SMCHD1-213ENST00000609587 ATOH1Q92858 354 aaPredicted RBP4.56□□□□□ -1.68
SMCHD1-213ENST00000609587 WACQ9BTA9 647 aa4.56□□□□□ -1.68
SMCHD1-213ENST00000609587 USP44Q9H0E7 712 aa4.56□□□□□ -1.68
SMCHD1-213ENST00000609587 TRNAU1APQ9NX07 287 aaKnown RBP4.56□□□□□ -1.68
SMCHD1-213ENST00000609587 MPP6Q9NZW5 540 aa4.56□□□□□ -1.68
SMCHD1-213ENST00000609587 ORC3Q9UBD5 711 aaPredicted RBP4.56□□□□□ -1.68
SMCHD1-213ENST00000609587 PLEKHB1Q9UF11 243 aaPredicted RBP4.56□□□□□ -1.68
SMCHD1-213ENST00000609587 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.56□□□□□ -1.68
SMCHD1-213ENST00000609587 PCDHGB5Q9Y5G0 923 aa4.56□□□□□ -1.68
SMCHD1-213ENST00000609587 SLC4A4Q9Y6R1 1079 aa4.56□□□□□ -1.68
SMCHD1-213ENST00000609587 C17orf102A2RUQ5 167 aa4.55□□□□□ -1.68
SMCHD1-213ENST00000609587 A6NNC1 897 aa4.55□□□□□ -1.68
SMCHD1-213ENST00000609587 ZNF814B7Z6K7 855 aa4.55□□□□□ -1.68
SMCHD1-213ENST00000609587 TNFSF14O43557 240 aa4.55□□□□□ -1.68
SMCHD1-213ENST00000609587 SLC25A17O43808 307 aa4.55□□□□□ -1.68
SMCHD1-213ENST00000609587 TACC1O75410 805 aa4.55□□□□□ -1.68
SMCHD1-213ENST00000609587 BAIAP3O94812 1187 aa4.55□□□□□ -1.68
SMCHD1-213ENST00000609587 TMEM63AO94886 807 aa4.55□□□□□ -1.68
SMCHD1-213ENST00000609587 GALTP07902 379 aa4.55□□□□□ -1.68
SMCHD1-213ENST00000609587 CHRNB1P11230 501 aa4.55□□□□□ -1.68
SMCHD1-213ENST00000609587 UBL4AP11441 157 aa4.55□□□□□ -1.68
SMCHD1-213ENST00000609587 UNGP13051 313 aaPredicted RBP4.55□□□□□ -1.68
SMCHD1-213ENST00000609587 FMO4P31512 558 aa4.55□□□□□ -1.68
SMCHD1-213ENST00000609587 TNFSF8P32971 234 aa4.55□□□□□ -1.68
SMCHD1-213ENST00000609587 ABCD1P33897 745 aa4.55□□□□□ -1.68
SMCHD1-213ENST00000609587 RXRGP48443 463 aa4.55□□□□□ -1.68
SMCHD1-213ENST00000609587 YWHAZP63104 245 aaKnown RBP4.55□□□□□ -1.68
SMCHD1-213ENST00000609587 CYP4A11Q02928 519 aa4.55□□□□□ -1.68
SMCHD1-213ENST00000609587 NEXNQ0ZGT2 675 aa4.55□□□□□ -1.68
SMCHD1-213ENST00000609587 INPP5JQ15735 1006 aaPredicted RBP4.55□□□□□ -1.68
SMCHD1-213ENST00000609587 RUSC1-AS1Q66K80 236 aa4.55□□□□□ -1.68
SMCHD1-213ENST00000609587 SHC4Q6S5L8 630 aa4.55□□□□□ -1.68
SMCHD1-213ENST00000609587 SERPINA11Q86U17 422 aa4.55□□□□□ -1.68
SMCHD1-213ENST00000609587 TMC8Q8IU68 726 aa4.55□□□□□ -1.68
SMCHD1-213ENST00000609587 FAM217AQ8IXS0 508 aa4.55□□□□□ -1.68
SMCHD1-213ENST00000609587 DIS3L2Q8IYB7 885 aaKnown RBP4.55□□□□□ -1.68
SMCHD1-213ENST00000609587 OR4N2Q8NGD1 307 aa4.55□□□□□ -1.68
SMCHD1-213ENST00000609587 C16orf52Q8NHV5 167 aa4.55□□□□□ -1.68
SMCHD1-213ENST00000609587 KLHL29Q96CT2 875 aa4.55□□□□□ -1.68
SMCHD1-213ENST00000609587 SAAL1Q96ER3 474 aa4.55□□□□□ -1.68
SMCHD1-213ENST00000609587 ZFYVE19Q96K21 471 aa4.55□□□□□ -1.68
SMCHD1-213ENST00000609587 KLHL15Q96M94 604 aa4.55□□□□□ -1.68
SMCHD1-213ENST00000609587 TRMOQ9BU70 441 aa4.55□□□□□ -1.68
SMCHD1-213ENST00000609587 SNTG1Q9NSN8 517 aa4.55□□□□□ -1.68
SMCHD1-213ENST00000609587 KIAA1456Q9P272 454 aa4.55□□□□□ -1.68
SMCHD1-213ENST00000609587 HSPB7Q9UBY9 170 aa4.55□□□□□ -1.68
SMCHD1-213ENST00000609587 ZNF580Q9UK33 172 aa4.55□□□□□ -1.68
SMCHD1-213ENST00000609587 COG5Q9UP83 839 aa4.55□□□□□ -1.68
SMCHD1-213ENST00000609587 KDM3AQ9Y4C1 1321 aa4.54□□□□□ -1.68
SMCHD1-213ENST00000609587 A0A087X0M5 115 aa4.54□□□□□ -1.68
SMCHD1-213ENST00000609587 A0A096LPK6 155 aa4.54□□□□□ -1.68
SMCHD1-213ENST00000609587 A0A1B0GX30 115 aa4.54□□□□□ -1.68
SMCHD1-213ENST00000609587 NTN1O95631 604 aa4.54□□□□□ -1.68
SMCHD1-213ENST00000609587 FGBP02675 491 aa4.54□□□□□ -1.68
SMCHD1-213ENST00000609587 SLC2A4P14672 509 aa4.54□□□□□ -1.68
SMCHD1-213ENST00000609587 POU1F1P28069 291 aa4.54□□□□□ -1.68
SMCHD1-213ENST00000609587 RFC1P35251 1148 aaPredicted RBP4.54□□□□□ -1.68
SMCHD1-213ENST00000609587 CTCFP49711 727 aaPredicted RBP4.54□□□□□ -1.68
SMCHD1-213ENST00000609587 TMPRSS3P57727 454 aa4.54□□□□□ -1.68
SMCHD1-213ENST00000609587 SLC18A2Q05940 514 aa4.54□□□□□ -1.68
SMCHD1-213ENST00000609587 FHL1Q13642 323 aa4.54□□□□□ -1.68
SMCHD1-213ENST00000609587 KRT32Q14532 448 aa4.54□□□□□ -1.68
SMCHD1-213ENST00000609587 RBMS2Q15434 407 aaKnown RBP4.54□□□□□ -1.68
SMCHD1-213ENST00000609587 TAF11Q15544 211 aa4.54□□□□□ -1.68
SMCHD1-213ENST00000609587 SERTAD4-AS1Q5TG53 156 aa4.54□□□□□ -1.68
SMCHD1-213ENST00000609587 PXDC1Q5TGL8 231 aa4.54□□□□□ -1.68
SMCHD1-213ENST00000609587 CCDC30Q5VVM6 783 aa4.54□□□□□ -1.68
SMCHD1-213ENST00000609587 HAUS3Q68CZ6 603 aa4.54□□□□□ -1.68
SMCHD1-213ENST00000609587 KRTAP5-1Q6L8H4 278 aa4.54□□□□□ -1.68
SMCHD1-213ENST00000609587 CPLX4Q7Z7G2 160 aa4.54□□□□□ -1.68
SMCHD1-213ENST00000609587 GPAT4Q86UL3 456 aa4.54□□□□□ -1.68
SMCHD1-213ENST00000609587 ZDHHC23Q8IYP9 409 aa4.54□□□□□ -1.68
SMCHD1-213ENST00000609587 HORMAD2Q8N7B1 307 aa4.54□□□□□ -1.68
SMCHD1-213ENST00000609587 NANOGP1Q8N7R0 232 aa4.54□□□□□ -1.68
SMCHD1-213ENST00000609587 RASSF8Q8NHQ8 419 aa4.54□□□□□ -1.68
SMCHD1-213ENST00000609587 METTL6Q8TCB7 284 aa4.54□□□□□ -1.68
SMCHD1-213ENST00000609587 KCNG4Q8TDN1 519 aa4.54□□□□□ -1.68
SMCHD1-213ENST00000609587 TMEM174Q8WUU8 243 aa4.54□□□□□ -1.68
SMCHD1-213ENST00000609587 TMEM170AQ8WVE7 144 aa4.54□□□□□ -1.68
SMCHD1-213ENST00000609587 MSI2Q96DH6 328 aaKnown RBP4.54□□□□□ -1.68
SMCHD1-213ENST00000609587 ZNF333Q96JL9 665 aa4.54□□□□□ -1.68
SMCHD1-213ENST00000609587 NR1H4Q96RI1 486 aaPredicted RBP4.54□□□□□ -1.68
SMCHD1-213ENST00000609587 HEMGNQ9BXL5 484 aa4.54□□□□□ -1.68
SMCHD1-213ENST00000609587 B3GNT4Q9C0J1 378 aa4.54□□□□□ -1.68
SMCHD1-213ENST00000609587 SPRTNQ9H040 489 aaPredicted RBP4.54□□□□□ -1.68
SMCHD1-213ENST00000609587 TASP1Q9H6P5 420 aa4.54□□□□□ -1.68
SMCHD1-213ENST00000609587 WDR6Q9NNW5 1121 aaKnown RBP4.54□□□□□ -1.68
SMCHD1-213ENST00000609587 PCDHB16Q9NRJ7 776 aa4.54□□□□□ -1.68
SMCHD1-213ENST00000609587 C20orf141Q9NUB4 165 aa4.54□□□□□ -1.68
SMCHD1-213ENST00000609587 HEY2Q9UBP5 337 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms