RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 ZNF449Q6P9G9 518 aa21.87■■□□□ 1.09
USP6NL-204ENST00000606752 POTEHQ6S545 545 aa21.87■■□□□ 1.09
USP6NL-204ENST00000606752 KDELC2Q7Z4H8 507 aa21.87■■□□□ 1.09
USP6NL-204ENST00000606752 FIBINQ8TAL6 211 aa21.87■■□□□ 1.09
USP6NL-204ENST00000606752 RIN3Q8TB24 985 aa21.87■■□□□ 1.09
USP6NL-204ENST00000606752 SELENOSQ9BQE4 189 aa21.87■■□□□ 1.09
USP6NL-204ENST00000606752 KIFC1Q9BW19 673 aa21.87■■□□□ 1.09
USP6NL-204ENST00000606752 ZNF180Q9UJW8 692 aa21.87■■□□□ 1.09
USP6NL-204ENST00000606752 FAM169AQ9Y6X4 670 aa21.87■■□□□ 1.09
USP6NL-204ENST00000606752 SNAP91O60641 907 aa21.87■■□□□ 1.09
USP6NL-204ENST00000606752 CREB1P16220 341 aa21.87■■□□□ 1.09
USP6NL-204ENST00000606752 CSKP41240 450 aa21.87■■□□□ 1.09
USP6NL-204ENST00000606752 CYTH1Q15438 398 aa21.87■■□□□ 1.09
USP6NL-204ENST00000606752 FYB2Q5VWT5 728 aa21.87■■□□□ 1.09
USP6NL-204ENST00000606752 CES3Q6UWW8 571 aa21.87■■□□□ 1.09
USP6NL-204ENST00000606752 TMC5Q6UXY8 1006 aa21.87■■□□□ 1.09
USP6NL-204ENST00000606752 ARID3BQ8IVW6 561 aaPredicted RBP21.87■■□□□ 1.09
USP6NL-204ENST00000606752 DCAF4L2Q8NA75 395 aa21.87■■□□□ 1.09
USP6NL-204ENST00000606752 CDKL2Q92772 493 aa21.87■■□□□ 1.09
USP6NL-204ENST00000606752 FCRL3Q96P31 734 aaPredicted RBP21.87■■□□□ 1.09
USP6NL-204ENST00000606752 SFXN1Q9H9B4 322 aa21.87■■□□□ 1.09
USP6NL-204ENST00000606752 CHRAC1Q9NRG0 131 aa21.87■■□□□ 1.09
USP6NL-204ENST00000606752 PLK2Q9NYY3 685 aa21.87■■□□□ 1.09
USP6NL-204ENST00000606752 TBC1D14Q9P2M4 693 aa21.87■■□□□ 1.09
USP6NL-204ENST00000606752 PDE4DIPQ5VU43 2346 aa21.86■■□□□ 1.09
USP6NL-204ENST00000606752 IQANK1A0A1B0GTG1 560 aa21.86■■□□□ 1.09
USP6NL-204ENST00000606752 SHOX2O60902 331 aaPredicted RBP21.86■■□□□ 1.09
USP6NL-204ENST00000606752 CD160O95971 181 aa21.86■■□□□ 1.09
USP6NL-204ENST00000606752 BRAFP15056 766 aa21.86■■□□□ 1.09
USP6NL-204ENST00000606752 CES1P23141 567 aa21.86■■□□□ 1.09
USP6NL-204ENST00000606752 GUCY1A3Q02108 690 aa21.86■■□□□ 1.09
USP6NL-204ENST00000606752 CBX2Q14781 532 aaPredicted RBP21.86■■□□□ 1.09
USP6NL-204ENST00000606752 ZNF77Q15935 545 aa21.86■■□□□ 1.09
USP6NL-204ENST00000606752 INO80DQ53TQ3 878 aaPredicted RBP21.86■■□□□ 1.09
USP6NL-204ENST00000606752 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.86■■□□□ 1.09
USP6NL-204ENST00000606752 VN1R2Q8NFZ6 395 aa21.86■■□□□ 1.09
USP6NL-204ENST00000606752 ITFG1Q8TB96 612 aa21.86■■□□□ 1.09
USP6NL-204ENST00000606752 ING5Q8WYH8 240 aa21.86■■□□□ 1.09
USP6NL-204ENST00000606752 ZNF669Q96BR6 464 aaPredicted RBP21.86■■□□□ 1.09
USP6NL-204ENST00000606752 PPANQ9NQ55 473 aaKnown RBP21.86■■□□□ 1.09
USP6NL-204ENST00000606752 KIAA1522Q9P206 1035 aaPredicted RBP21.86■■□□□ 1.09
USP6NL-204ENST00000606752 ZCWPW2A0A1B0GU75 182 aa21.85■■□□□ 1.09
USP6NL-204ENST00000606752 LOC285095A0A1B0GVY8 99 aa21.85■■□□□ 1.09
USP6NL-204ENST00000606752 SERPINF2P08697 491 aa21.85■■□□□ 1.09
USP6NL-204ENST00000606752 CHRNA4P43681 627 aa21.85■■□□□ 1.09
USP6NL-204ENST00000606752 SLC14A2Q15849 920 aa21.85■■□□□ 1.09
USP6NL-204ENST00000606752 ARMC3Q5W041 872 aa21.85■■□□□ 1.09
USP6NL-204ENST00000606752 PKN3Q6P5Z2 889 aa21.85■■□□□ 1.09
USP6NL-204ENST00000606752 UNC5BQ8IZJ1 945 aa21.85■■□□□ 1.09
USP6NL-204ENST00000606752 MDM1Q8TC05 714 aa21.85■■□□□ 1.09
USP6NL-204ENST00000606752 PTCD2Q8WV60 388 aaKnown RBP21.85■■□□□ 1.09
USP6NL-204ENST00000606752 MFSD3Q96ES6 412 aa21.85■■□□□ 1.09
USP6NL-204ENST00000606752 CERS2Q96G23 380 aa21.85■■□□□ 1.09
USP6NL-204ENST00000606752 C2orf49Q9BVC5 232 aaPredicted RBP21.85■■□□□ 1.09
USP6NL-204ENST00000606752 TRABDQ9H4I3 376 aa21.85■■□□□ 1.09
USP6NL-204ENST00000606752 VPS51Q9UID3 782 aa21.85■■□□□ 1.09
USP6NL-204ENST00000606752 GJB3O75712 270 aa21.85■■□□□ 1.09
USP6NL-204ENST00000606752 EPOP01588 193 aa21.85■■□□□ 1.09
USP6NL-204ENST00000606752 GNGT1P63211 74 aa21.85■■□□□ 1.09
USP6NL-204ENST00000606752 MGAT5Q09328 741 aa21.85■■□□□ 1.09
USP6NL-204ENST00000606752 USP4Q13107 963 aa21.85■■□□□ 1.09
USP6NL-204ENST00000606752 POU6F1Q14863 301 aa21.85■■□□□ 1.09
USP6NL-204ENST00000606752 SLC1A5Q15758 541 aa21.85■■□□□ 1.09
USP6NL-204ENST00000606752 LGSNQ5TDP6 509 aa21.85■■□□□ 1.09
USP6NL-204ENST00000606752 TTC19Q6DKK2 380 aaPredicted RBP21.85■■□□□ 1.09
USP6NL-204ENST00000606752 LINGO4Q6UY18 593 aa21.85■■□□□ 1.09
USP6NL-204ENST00000606752 SLC25A41Q8N5S1 370 aa21.85■■□□□ 1.09
USP6NL-204ENST00000606752 MZB1Q8WU39 189 aa21.85■■□□□ 1.09
USP6NL-204ENST00000606752 PPP2R3CQ969Q6 453 aa21.85■■□□□ 1.09
USP6NL-204ENST00000606752 MRPL38Q96DV4 380 aaKnown RBP21.85■■□□□ 1.09
USP6NL-204ENST00000606752 CLEC4EQ9ULY5 219 aa21.85■■□□□ 1.09
USP6NL-204ENST00000606752 CR2P20023 1033 aa21.84■■□□□ 1.09
USP6NL-204ENST00000606752 ADRA1DP25100 572 aa21.84■■□□□ 1.09
USP6NL-204ENST00000606752 PPARDQ03181 441 aa21.84■■□□□ 1.09
USP6NL-204ENST00000606752 NAB1Q13506 487 aa21.84■■□□□ 1.09
USP6NL-204ENST00000606752 MARK2Q7KZI7 788 aaKnown RBP21.84■■□□□ 1.09
USP6NL-204ENST00000606752 TMEM25Q86YD3 366 aa21.84■■□□□ 1.09
USP6NL-204ENST00000606752 APCDD1Q8J025 514 aa21.84■■□□□ 1.09
USP6NL-204ENST00000606752 PPHLN1Q8NEY8 458 aaKnown RBP21.84■■□□□ 1.09
USP6NL-204ENST00000606752 ACDQ96AP0 544 aa21.84■■□□□ 1.09
USP6NL-204ENST00000606752 FEM1CQ96JP0 617 aa21.84■■□□□ 1.09
USP6NL-204ENST00000606752 NOD2Q9HC29 1040 aa21.84■■□□□ 1.09
USP6NL-204ENST00000606752 MRM3Q9HC36 420 aaKnown RBP21.84■■□□□ 1.09
USP6NL-204ENST00000606752 KCNK9Q9NPC2 374 aa21.84■■□□□ 1.09
USP6NL-204ENST00000606752 DZANK1Q9NVP4 752 aa21.84■■□□□ 1.09
USP6NL-204ENST00000606752 A0A1W2PPM1 405 aa21.83■■□□□ 1.09
USP6NL-204ENST00000606752 TMEM120BA0PK00 339 aa21.83■■□□□ 1.09
USP6NL-204ENST00000606752 INSIG1O15503 277 aa21.83■■□□□ 1.09
USP6NL-204ENST00000606752 FAM155BO75949 473 aa21.83■■□□□ 1.09
USP6NL-204ENST00000606752 TMCC1O94876 653 aa21.83■■□□□ 1.09
USP6NL-204ENST00000606752 CHN1P15882 459 aa21.83■■□□□ 1.09
USP6NL-204ENST00000606752 WEE1P30291 646 aa21.83■■□□□ 1.09
USP6NL-204ENST00000606752 RGRP47804 291 aa21.83■■□□□ 1.09
USP6NL-204ENST00000606752 SERPINH1P50454 418 aaKnown RBP21.83■■□□□ 1.09
USP6NL-204ENST00000606752 SCNN1BP51168 640 aa21.83■■□□□ 1.09
USP6NL-204ENST00000606752 CDK18Q07002 472 aa21.83■■□□□ 1.09
USP6NL-204ENST00000606752 LMAN2Q12907 356 aa21.83■■□□□ 1.09
USP6NL-204ENST00000606752 RETSATQ6NUM9 610 aa21.83■■□□□ 1.09
USP6NL-204ENST00000606752 OTUB2Q96DC9 234 aa21.83■■□□□ 1.09
USP6NL-204ENST00000606752 IFT43Q96FT9 208 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms