RNA–Protein interactions for RNA: ENST00000600948.5

PLD3-223, Transcript of phospholipase D family member 3, human

TSL 2

Gene PLD3, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLD3-223	ENST00000600948	SH3BP5	O60239	455 aa		15.73	■□□□□ 0.11
PLD3-223	ENST00000600948	POP4	O95707	220 aa	Known RBP	15.73	■□□□□ 0.11
PLD3-223	ENST00000600948	ADRB3	P13945	408 aa		15.73	■□□□□ 0.11
PLD3-223	ENST00000600948	HCAR3	P49019	387 aa		15.73	■□□□□ 0.11
PLD3-223	ENST00000600948	C21orf59	P57076	290 aa		15.73	■□□□□ 0.11
PLD3-223	ENST00000600948	MAPK8IP2	Q13387	824 aa	Predicted RBP	15.73	■□□□□ 0.11
PLD3-223	ENST00000600948	DPYS	Q14117	519 aa		15.73	■□□□□ 0.11
PLD3-223	ENST00000600948	DPYSL2	Q16555	572 aa		15.73	■□□□□ 0.11
PLD3-223	ENST00000600948	SLC18A3	Q16572	532 aa		15.73	■□□□□ 0.11
PLD3-223	ENST00000600948	SMTNL2	Q2TAL5	461 aa		15.73	■□□□□ 0.11
PLD3-223	ENST00000600948	MYLK3	Q32MK0	819 aa		15.73	■□□□□ 0.11
PLD3-223	ENST00000600948	AFMID	Q63HM1	303 aa		15.73	■□□□□ 0.11
PLD3-223	ENST00000600948	TXNRD3NB	Q6F5E7	133 aa		15.73	■□□□□ 0.11
PLD3-223	ENST00000600948	NEK5	Q6P3R8	708 aa		15.73	■□□□□ 0.11
PLD3-223	ENST00000600948	NAXD	Q8IW45	347 aa		15.73	■□□□□ 0.11
PLD3-223	ENST00000600948	ARHGAP12	Q8IWW6	846 aa		15.73	■□□□□ 0.11
PLD3-223	ENST00000600948	RYBP	Q8N488	228 aa	Predicted RBP	15.73	■□□□□ 0.11
PLD3-223	ENST00000600948	NPW	Q8N729	165 aa		15.73	■□□□□ 0.11
PLD3-223	ENST00000600948	NETO2	Q8NC67	525 aa		15.73	■□□□□ 0.11
PLD3-223	ENST00000600948	LRIG1	Q96JA1	1093 aa		15.73	■□□□□ 0.11
PLD3-223	ENST00000600948	CAMK1G	Q96NX5	476 aa		15.73	■□□□□ 0.11
PLD3-223	ENST00000600948	SLC39A8	Q9C0K1	460 aa		15.73	■□□□□ 0.11
PLD3-223	ENST00000600948	ABHD10	Q9NUJ1	306 aa		15.73	■□□□□ 0.11
PLD3-223	ENST00000600948	LHX3	Q9UBR4	397 aa		15.73	■□□□□ 0.11
PLD3-223	ENST00000600948	IP6K2	Q9UHH9	426 aa		15.73	■□□□□ 0.11
PLD3-223	ENST00000600948	PCDHGB2	Q9Y5G2	931 aa		15.73	■□□□□ 0.11
PLD3-223	ENST00000600948	SPAAR	A0A1B0GVQ0	90 aa		15.72	■□□□□ 0.11
PLD3-223	ENST00000600948		A0A1W2PQU0	124 aa		15.72	■□□□□ 0.11
PLD3-223	ENST00000600948		J3KR12	359 aa		15.72	■□□□□ 0.11
PLD3-223	ENST00000600948	KRIT1	O00522	736 aa		15.72	■□□□□ 0.11
PLD3-223	ENST00000600948	KCNK3	O14649	394 aa		15.72	■□□□□ 0.11
PLD3-223	ENST00000600948	DAPK3	O43293	454 aa		15.72	■□□□□ 0.11
PLD3-223	ENST00000600948	PRAMEF11	O60813	436 aa		15.72	■□□□□ 0.11
PLD3-223	ENST00000600948	MFAP3L	O75121	409 aa		15.72	■□□□□ 0.11
PLD3-223	ENST00000600948	RARA	P10276	462 aa		15.72	■□□□□ 0.11
PLD3-223	ENST00000600948	PAPOLA	P51003	745 aa	Known RBP	15.72	■□□□□ 0.11
PLD3-223	ENST00000600948	RHOA	P61586	193 aa		15.72	■□□□□ 0.11
PLD3-223	ENST00000600948	FAM193A	P78312	1265 aa		15.72	■□□□□ 0.11
PLD3-223	ENST00000600948	SLC25A11	Q02978	314 aa	Known RBP	15.72	■□□□□ 0.11
PLD3-223	ENST00000600948	CYTH1	Q15438	398 aa		15.72	■□□□□ 0.11
PLD3-223	ENST00000600948	ZNF284	Q2VY69	593 aa		15.72	■□□□□ 0.11
PLD3-223	ENST00000600948	SETMAR	Q53H47	684 aa	Predicted RBP	15.72	■□□□□ 0.11
PLD3-223	ENST00000600948	BOLA3	Q53S33	107 aa		15.72	■□□□□ 0.11
PLD3-223	ENST00000600948	ZNF805	Q5CZA5	627 aa		15.72	■□□□□ 0.11
PLD3-223	ENST00000600948	DBX2	Q6ZNG2	339 aa		15.72	■□□□□ 0.11
PLD3-223	ENST00000600948	HORMAD1	Q86X24	394 aa		15.72	■□□□□ 0.11
PLD3-223	ENST00000600948	TEKT4	Q8WW24	435 aa		15.72	■□□□□ 0.11
PLD3-223	ENST00000600948	SKA1	Q96BD8	255 aa		15.72	■□□□□ 0.11
PLD3-223	ENST00000600948	GDAP1L1	Q96MZ0	367 aa		15.72	■□□□□ 0.11
PLD3-223	ENST00000600948	PACSIN1	Q9BY11	444 aa		15.72	■□□□□ 0.11
PLD3-223	ENST00000600948	ZWILCH	Q9H900	591 aa		15.72	■□□□□ 0.11
PLD3-223	ENST00000600948	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	15.72	■□□□□ 0.11
PLD3-223	ENST00000600948	UBA2	Q9UBT2	640 aa	Predicted RBP	15.72	■□□□□ 0.11
PLD3-223	ENST00000600948	ZFR2	Q9UPR6	939 aa	Known RBP	15.72	■□□□□ 0.11
PLD3-223	ENST00000600948	FADS3	Q9Y5Q0	445 aa		15.72	■□□□□ 0.11
PLD3-223	ENST00000600948	SHROOM3	Q8TF72	1996 aa		15.72	■□□□□ 0.11
PLD3-223	ENST00000600948	ACACB	O00763	2458 aa		15.71	■□□□□ 0.11
PLD3-223	ENST00000600948	ARHGAP42	A6NI28	874 aa		15.71	■□□□□ 0.11
PLD3-223	ENST00000600948		H3BRJ5	948 aa		15.71	■□□□□ 0.11
PLD3-223	ENST00000600948	MYO1F	O00160	1098 aa		15.71	■□□□□ 0.11
PLD3-223	ENST00000600948	AP1G1	O43747	822 aa		15.71	■□□□□ 0.11
PLD3-223	ENST00000600948	CBFA2T3	O75081	653 aa		15.71	■□□□□ 0.11
PLD3-223	ENST00000600948	IGSF6	O95976	241 aa		15.71	■□□□□ 0.11
PLD3-223	ENST00000600948	UGT2B4	P06133	528 aa		15.71	■□□□□ 0.11
PLD3-223	ENST00000600948	TPM1	P09493	284 aa		15.71	■□□□□ 0.11
PLD3-223	ENST00000600948	ABL2	P42684	1182 aa		15.71	■□□□□ 0.11
PLD3-223	ENST00000600948	CCT8	P50990	548 aa		15.71	■□□□□ 0.11
PLD3-223	ENST00000600948	ADK	P55263	362 aa	Known RBP	15.71	■□□□□ 0.11
PLD3-223	ENST00000600948	NXPH1	P58417	271 aa		15.71	■□□□□ 0.11
PLD3-223	ENST00000600948	HNRNPD	Q14103	355 aa	Known RBP	15.71	■□□□□ 0.11
PLD3-223	ENST00000600948	TMEM259	Q4ZIN3	620 aa		15.71	■□□□□ 0.11
PLD3-223	ENST00000600948	SLC45A4	Q5BKX6	768 aa		15.71	■□□□□ 0.11
PLD3-223	ENST00000600948	FBXL19	Q6PCT2	694 aa		15.71	■□□□□ 0.11
PLD3-223	ENST00000600948	SARM1	Q6SZW1	724 aa		15.71	■□□□□ 0.11
PLD3-223	ENST00000600948	POLN	Q7Z5Q5	900 aa		15.71	■□□□□ 0.11
PLD3-223	ENST00000600948	MFSD2A	Q8NA29	543 aa		15.71	■□□□□ 0.11
PLD3-223	ENST00000600948	ZNF564	Q8TBZ8	553 aa	Predicted RBP	15.71	■□□□□ 0.11
PLD3-223	ENST00000600948	HSPH1	Q92598	858 aa		15.71	■□□□□ 0.11
PLD3-223	ENST00000600948	KLK6	Q92876	244 aa		15.71	■□□□□ 0.11
PLD3-223	ENST00000600948	CHP1	Q99653	195 aa		15.71	■□□□□ 0.11
PLD3-223	ENST00000600948	OSBPL1A	Q9BXW6	950 aa		15.71	■□□□□ 0.11
PLD3-223	ENST00000600948	ZNHIT6	Q9NWK9	470 aa	Known RBP	15.71	■□□□□ 0.11
PLD3-223	ENST00000600948	MFHAS1	Q9Y4C4	1052 aa		15.71	■□□□□ 0.11
PLD3-223	ENST00000600948	LRRK1	Q38SD2	2015 aa		15.71	■□□□□ 0.11
PLD3-223	ENST00000600948	ARID1B	Q8NFD5	2236 aa	Predicted RBP	15.7	■□□□□ 0.1
PLD3-223	ENST00000600948	CHD8	Q9HCK8	2581 aa		15.7	■□□□□ 0.1
PLD3-223	ENST00000600948		A0A1B0GTQ1	180 aa		15.7	■□□□□ 0.1
PLD3-223	ENST00000600948	C16orf96	A6NNT2	1141 aa		15.7	■□□□□ 0.1
PLD3-223	ENST00000600948	PRAMEF26	H0Y7S4	382 aa		15.7	■□□□□ 0.1
PLD3-223	ENST00000600948	TLR4	O00206	839 aa		15.7	■□□□□ 0.1
PLD3-223	ENST00000600948	SLC31A1	O15431	190 aa		15.7	■□□□□ 0.1
PLD3-223	ENST00000600948	FLRT2	O43155	660 aa		15.7	■□□□□ 0.1
PLD3-223	ENST00000600948	DFNA5	O60443	496 aa		15.7	■□□□□ 0.1
PLD3-223	ENST00000600948	PCDH8	O95206	1070 aa		15.7	■□□□□ 0.1
PLD3-223	ENST00000600948	H2AFZ	P0C0S5	128 aa		15.7	■□□□□ 0.1
PLD3-223	ENST00000600948	PRLR	P16471	622 aa		15.7	■□□□□ 0.1
PLD3-223	ENST00000600948	ARL4A	P40617	200 aa		15.7	■□□□□ 0.1
PLD3-223	ENST00000600948	SIM1	P81133	766 aa	Predicted RBP	15.7	■□□□□ 0.1
PLD3-223	ENST00000600948	SHC2	P98077	582 aa		15.7	■□□□□ 0.1
PLD3-223	ENST00000600948	TBX2	Q13207	712 aa	Predicted RBP	15.7	■□□□□ 0.1

Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms