RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 GSPT2Q8IYD1 628 aaKnown RBP23.26■■□□□ 1.31
IRF3-227ENST00000600911 GJD3Q8N144 294 aa23.26■■□□□ 1.31
IRF3-227ENST00000600911 ZNF687Q8N1G0 1237 aa23.26■■□□□ 1.31
IRF3-227ENST00000600911 CHST14Q8NCH0 376 aa23.26■■□□□ 1.31
IRF3-227ENST00000600911 MYRIPQ8NFW9 859 aa23.26■■□□□ 1.31
IRF3-227ENST00000600911 FAM3CQ92520 227 aa23.26■■□□□ 1.31
IRF3-227ENST00000600911 UBXN4Q92575 508 aa23.26■■□□□ 1.31
IRF3-227ENST00000600911 PTPRN2Q92932 1015 aa23.26■■□□□ 1.31
IRF3-227ENST00000600911 TADA1Q96BN2 335 aa23.26■■□□□ 1.31
IRF3-227ENST00000600911 IMP4Q96G21 291 aaKnown RBP23.26■■□□□ 1.31
IRF3-227ENST00000600911 FCRL5Q96RD9 977 aa23.26■■□□□ 1.31
IRF3-227ENST00000600911 TMEM245Q9H330 911 aa23.26■■□□□ 1.31
IRF3-227ENST00000600911 EVLQ9UI08 416 aaPredicted RBP23.26■■□□□ 1.31
IRF3-227ENST00000600911 UTP11Q9Y3A2 253 aaKnown RBP23.26■■□□□ 1.31
IRF3-227ENST00000600911 STARD13Q9Y3M8 1113 aa23.26■■□□□ 1.31
IRF3-227ENST00000600911 MTF2Q9Y483 593 aaPredicted RBP23.26■■□□□ 1.31
IRF3-227ENST00000600911 BNIP3LO60238 219 aa23.25■■□□□ 1.31
IRF3-227ENST00000600911 SRPRAP08240 638 aaKnown RBP23.25■■□□□ 1.31
IRF3-227ENST00000600911 TIE1P35590 1138 aa23.25■■□□□ 1.31
IRF3-227ENST00000600911 CARSP49589 748 aaKnown RBP23.25■■□□□ 1.31
IRF3-227ENST00000600911 SCNN1BP51168 640 aa23.25■■□□□ 1.31
IRF3-227ENST00000600911 SKOR1P84550 965 aa23.25■■□□□ 1.31
IRF3-227ENST00000600911 SEMA5AQ13591 1074 aa23.25■■□□□ 1.31
IRF3-227ENST00000600911 KLHDC8BQ8IXV7 354 aa23.25■■□□□ 1.31
IRF3-227ENST00000600911 PDCD7Q8N8D1 485 aaKnown RBP23.25■■□□□ 1.31
IRF3-227ENST00000600911 POLR1EQ9GZS1 481 aaKnown RBP23.25■■□□□ 1.31
IRF3-227ENST00000600911 SLC25A51Q9H1U9 297 aa23.25■■□□□ 1.31
IRF3-227ENST00000600911 ARHGEF3Q9NR81 526 aa23.25■■□□□ 1.31
IRF3-227ENST00000600911 POLR3BQ9NW08 1133 aaPredicted RBP23.25■■□□□ 1.31
IRF3-227ENST00000600911 CXorf51AA0A1B0GTR3 108 aa23.24■■□□□ 1.31
IRF3-227ENST00000600911 NEBLO76041 1014 aa23.24■■□□□ 1.31
IRF3-227ENST00000600911 ITGA8P53708 1063 aa23.24■■□□□ 1.31
IRF3-227ENST00000600911 FNDC3BQ53EP0 1204 aaKnown RBP23.24■■□□□ 1.31
IRF3-227ENST00000600911 KCTD11Q693B1 232 aa23.24■■□□□ 1.31
IRF3-227ENST00000600911 KDELC1Q6UW63 502 aa23.24■■□□□ 1.31
IRF3-227ENST00000600911 NAT8LQ8N9F0 302 aa23.24■■□□□ 1.31
IRF3-227ENST00000600911 OR2A12Q8NGT7 310 aa23.24■■□□□ 1.31
IRF3-227ENST00000600911 SNF8Q96H20 258 aa23.24■■□□□ 1.31
IRF3-227ENST00000600911 FERMT1Q9BQL6 677 aa23.24■■□□□ 1.31
IRF3-227ENST00000600911 NDRG2Q9UN36 371 aaKnown RBP23.24■■□□□ 1.31
IRF3-227ENST00000600911 CTIFO43310 598 aaKnown RBP23.23■■□□□ 1.31
IRF3-227ENST00000600911 USP12O75317 370 aa23.23■■□□□ 1.31
IRF3-227ENST00000600911 GLULP15104 373 aa23.23■■□□□ 1.31
IRF3-227ENST00000600911 ACTN2P35609 894 aa23.23■■□□□ 1.31
IRF3-227ENST00000600911 TNFRSF4P43489 277 aa23.23■■□□□ 1.31
IRF3-227ENST00000600911 VASPP50552 380 aaPredicted RBP23.23■■□□□ 1.31
IRF3-227ENST00000600911 GEMIN4P57678 1058 aaKnown RBP23.23■■□□□ 1.31
IRF3-227ENST00000600911 MTM1Q13496 603 aa23.23■■□□□ 1.31
IRF3-227ENST00000600911 CCINQ13939 588 aa23.23■■□□□ 1.31
IRF3-227ENST00000600911 ITPRIPL1Q6GPH6 555 aa23.23■■□□□ 1.31
IRF3-227ENST00000600911 PKN3Q6P5Z2 889 aa23.23■■□□□ 1.31
IRF3-227ENST00000600911 DPY19L3Q6ZPD9 716 aa23.23■■□□□ 1.31
IRF3-227ENST00000600911 ZNF534Q76KX8 674 aa23.23■■□□□ 1.31
IRF3-227ENST00000600911 NUDCD1Q96RS6 583 aa23.23■■□□□ 1.31
IRF3-227ENST00000600911 RAB17Q9H0T7 212 aa23.23■■□□□ 1.31
IRF3-227ENST00000600911 TIMM44O43615 452 aa23.22■■□□□ 1.31
IRF3-227ENST00000600911 PIGNO95427 931 aa23.22■■□□□ 1.31
IRF3-227ENST00000600911 VSNL1P62760 191 aa23.22■■□□□ 1.31
IRF3-227ENST00000600911 C2orf27AQ580R0 203 aa23.22■■□□□ 1.31
IRF3-227ENST00000600911 HIBCHQ6NVY1 386 aaPredicted RBP23.22■■□□□ 1.31
IRF3-227ENST00000600911 NCEH1Q6PIU2 408 aa23.22■■□□□ 1.31
IRF3-227ENST00000600911 ZNF513Q8N8E2 541 aaPredicted RBP23.22■■□□□ 1.31
IRF3-227ENST00000600911 OR2AP1Q8NGE2 309 aa23.22■■□□□ 1.31
IRF3-227ENST00000600911 PRCCQ92733 491 aaPredicted RBP23.22■■□□□ 1.31
IRF3-227ENST00000600911 ISG20Q96AZ6 181 aaKnown RBP23.22■■□□□ 1.31
IRF3-227ENST00000600911 MRGPRX2Q96LB1 330 aa23.22■■□□□ 1.31
IRF3-227ENST00000600911 APOL2Q9BQE5 337 aa23.22■■□□□ 1.31
IRF3-227ENST00000600911 CEP44Q9C0F1 390 aa23.22■■□□□ 1.31
IRF3-227ENST00000600911 ZDHHC18Q9NUE0 388 aa23.22■■□□□ 1.31
IRF3-227ENST00000600911 PIH1D1Q9NWS0 290 aaKnown RBP23.22■■□□□ 1.31
IRF3-227ENST00000600911 TPX2Q9ULW0 747 aaKnown RBP23.22■■□□□ 1.31
IRF3-227ENST00000600911 PLA2G4CQ9UP65 541 aa23.22■■□□□ 1.31
IRF3-227ENST00000600911 GOLGA8MH3BSY2 632 aa23.22■■□□□ 1.31
IRF3-227ENST00000600911 PMPCBO75439 489 aa23.22■■□□□ 1.31
IRF3-227ENST00000600911 CTSLP07711 333 aa23.22■■□□□ 1.31
IRF3-227ENST00000600911 APRTP07741 180 aa23.22■■□□□ 1.31
IRF3-227ENST00000600911 HNRNPLP14866 589 aaKnown RBP eCLIP23.22■■□□□ 1.31
IRF3-227ENST00000600911 TARSP26639 723 aaKnown RBP23.22■■□□□ 1.31
IRF3-227ENST00000600911 FDFT1P37268 417 aa23.22■■□□□ 1.31
IRF3-227ENST00000600911 CCNHP51946 323 aaPredicted RBP23.22■■□□□ 1.31
IRF3-227ENST00000600911 ENPP2Q13822 863 aa23.22■■□□□ 1.31
IRF3-227ENST00000600911 KDELC2Q7Z4H8 507 aa23.22■■□□□ 1.31
IRF3-227ENST00000600911 SRLQ86TD4 932 aa23.22■■□□□ 1.31
IRF3-227ENST00000600911 SUGP1Q8IWZ8 645 aaKnown RBP23.22■■□□□ 1.31
IRF3-227ENST00000600911 PCDH20Q8N6Y1 951 aaKnown RBP23.22■■□□□ 1.31
IRF3-227ENST00000600911 FBXO25Q8TCJ0 367 aa23.22■■□□□ 1.31
IRF3-227ENST00000600911 IFT81Q8WYA0 676 aa23.22■■□□□ 1.31
IRF3-227ENST00000600911 SCUBE2Q9NQ36 999 aa23.22■■□□□ 1.31
IRF3-227ENST00000600911 PCDHGC4Q9Y5F7 938 aa23.22■■□□□ 1.31
IRF3-227ENST00000600911 STON1Q9Y6Q2 735 aa23.22■■□□□ 1.31
IRF3-227ENST00000600911 TARSL2A2RTX5 802 aaKnown RBP23.21■■□□□ 1.31
IRF3-227ENST00000600911 ADAM23O75077 832 aa23.21■■□□□ 1.31
IRF3-227ENST00000600911 SIN3BO75182 1162 aa23.21■■□□□ 1.31
IRF3-227ENST00000600911 DRD1P21728 446 aa23.21■■□□□ 1.31
IRF3-227ENST00000600911 MAGEA6P43360 314 aa23.21■■□□□ 1.31
IRF3-227ENST00000600911 NSUN2Q08J23 767 aaKnown RBP eCLIP23.21■■□□□ 1.31
IRF3-227ENST00000600911 GRSF1Q12849 480 aaKnown RBP eCLIP23.21■■□□□ 1.31
IRF3-227ENST00000600911 TRAF2Q12933 501 aa23.21■■□□□ 1.31
IRF3-227ENST00000600911 FZD5Q13467 585 aa23.21■■□□□ 1.31
IRF3-227ENST00000600911 PCSK7Q16549 785 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms