RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 OR7D4Q8NG98 312 aa20.32■□□□□ 0.84
PNKP-214ENST00000600573 GDAP1Q8TB36 358 aa20.32■□□□□ 0.84
PNKP-214ENST00000600573 SH3RF2Q8TEC5 729 aa20.32■□□□□ 0.84
PNKP-214ENST00000600573 DDI1Q8WTU0 396 aa20.32■□□□□ 0.84
PNKP-214ENST00000600573 OTUB2Q96DC9 234 aa20.32■□□□□ 0.84
PNKP-214ENST00000600573 MTBPQ96DY7 904 aa20.32■□□□□ 0.84
PNKP-214ENST00000600573 ZNF419Q96HQ0 510 aaPredicted RBP20.32■□□□□ 0.84
PNKP-214ENST00000600573 MRGPRX2Q96LB1 330 aa20.32■□□□□ 0.84
PNKP-214ENST00000600573 KIFC1Q9BW19 673 aa20.32■□□□□ 0.84
PNKP-214ENST00000600573 UBP1Q9NZI7 540 aa20.32■□□□□ 0.84
PNKP-214ENST00000600573 CXorf49A8MYA2 514 aaPredicted RBP20.31■□□□□ 0.84
PNKP-214ENST00000600573 SNRPAP09012 282 aaKnown RBP20.31■□□□□ 0.84
PNKP-214ENST00000600573 GJA1P17302 382 aa20.31■□□□□ 0.84
PNKP-214ENST00000600573 CRADDP78560 199 aa20.31■□□□□ 0.84
PNKP-214ENST00000600573 RALGPS1Q5JS13 557 aa20.31■□□□□ 0.84
PNKP-214ENST00000600573 FYB2Q5VWT5 728 aa20.31■□□□□ 0.84
PNKP-214ENST00000600573 TRMT10BQ6PF06 316 aaKnown RBP20.31■□□□□ 0.84
PNKP-214ENST00000600573 SPRED2Q7Z698 418 aa20.31■□□□□ 0.84
PNKP-214ENST00000600573 LRRC34Q8IZ02 419 aa20.31■□□□□ 0.84
PNKP-214ENST00000600573 ARRDC2Q8TBH0 407 aa20.31■□□□□ 0.84
PNKP-214ENST00000600573 DENND1AQ8TEH3 1009 aa20.31■□□□□ 0.84
PNKP-214ENST00000600573 MAGEB18Q96M61 343 aa20.31■□□□□ 0.84
PNKP-214ENST00000600573 MGME1Q9BQP7 344 aa20.31■□□□□ 0.84
PNKP-214ENST00000600573 FICDQ9BVA6 458 aa20.31■□□□□ 0.84
PNKP-214ENST00000600573 CINPQ9BW66 212 aaPredicted RBP20.31■□□□□ 0.84
PNKP-214ENST00000600573 PBX4Q9BYU1 374 aa20.31■□□□□ 0.84
PNKP-214ENST00000600573 MLXIPLQ9NP71 852 aa20.31■□□□□ 0.84
PNKP-214ENST00000600573 SMYD2Q9NRG4 433 aa20.31■□□□□ 0.84
PNKP-214ENST00000600573 DZANK1Q9NVP4 752 aa20.31■□□□□ 0.84
PNKP-214ENST00000600573 KIAA1522Q9P206 1035 aaPredicted RBP20.31■□□□□ 0.84
PNKP-214ENST00000600573 GGA2Q9UJY4 613 aa20.31■□□□□ 0.84
PNKP-214ENST00000600573 RPS6KL1Q9Y6S9 549 aa20.31■□□□□ 0.84
PNKP-214ENST00000600573 OBSL1O75147 1896 aa20.31■□□□□ 0.84
PNKP-214ENST00000600573 MIA3Q5JRA6 1907 aa20.31■□□□□ 0.84
PNKP-214ENST00000600573 PER2O15055 1255 aa20.31■□□□□ 0.84
PNKP-214ENST00000600573 USP12O75317 370 aa20.31■□□□□ 0.84
PNKP-214ENST00000600573 PMPCBO75439 489 aa20.31■□□□□ 0.84
PNKP-214ENST00000600573 FAM155BO75949 473 aa20.31■□□□□ 0.84
PNKP-214ENST00000600573 KRT38O76015 456 aa20.31■□□□□ 0.84
PNKP-214ENST00000600573 VIMP08670 466 aaKnown RBP20.31■□□□□ 0.84
PNKP-214ENST00000600573 MGAT5Q09328 741 aa20.31■□□□□ 0.84
PNKP-214ENST00000600573 GKAP1Q5VSY0 366 aaPredicted RBP20.31■□□□□ 0.84
PNKP-214ENST00000600573 MFN1Q8IWA4 741 aa20.31■□□□□ 0.84
PNKP-214ENST00000600573 BBS7Q8IWZ6 715 aa20.31■□□□□ 0.84
PNKP-214ENST00000600573 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.31■□□□□ 0.84
PNKP-214ENST00000600573 FIBINQ8TAL6 211 aa20.31■□□□□ 0.84
PNKP-214ENST00000600573 ACDQ96AP0 544 aa20.31■□□□□ 0.84
PNKP-214ENST00000600573 TRIM56Q9BRZ2 755 aaKnown RBP20.31■□□□□ 0.84
PNKP-214ENST00000600573 FEM1AQ9BSK4 669 aa20.31■□□□□ 0.84
PNKP-214ENST00000600573 PIDD1Q9HB75 910 aa20.31■□□□□ 0.84
PNKP-214ENST00000600573 PIH1D1Q9NWS0 290 aaKnown RBP20.31■□□□□ 0.84
PNKP-214ENST00000600573 ARIH1Q9Y4X5 557 aaPredicted RBP20.31■□□□□ 0.84
PNKP-214ENST00000600573 TRIM49D1C9J1S8 452 aa20.3■□□□□ 0.84
PNKP-214ENST00000600573 SLC9A3R1O14745 358 aaPredicted RBP20.3■□□□□ 0.84
PNKP-214ENST00000600573 TM9SF1O15321 606 aa20.3■□□□□ 0.84
PNKP-214ENST00000600573 ASMTLO95671 621 aa20.3■□□□□ 0.84
PNKP-214ENST00000600573 SERPINF2P08697 491 aa20.3■□□□□ 0.84
PNKP-214ENST00000600573 ADRA1DP25100 572 aa20.3■□□□□ 0.84
PNKP-214ENST00000600573 CD86P42081 329 aa20.3■□□□□ 0.84
PNKP-214ENST00000600573 NSUN2Q08J23 767 aaKnown RBP eCLIP20.3■□□□□ 0.84
PNKP-214ENST00000600573 NIPAL4Q0D2K0 466 aa20.3■□□□□ 0.84
PNKP-214ENST00000600573 DNAJC3Q13217 504 aa20.3■□□□□ 0.84
PNKP-214ENST00000600573 QPCTQ16769 361 aa20.3■□□□□ 0.84
PNKP-214ENST00000600573 ANKRD20A4Q4UJ75 823 aa20.3■□□□□ 0.84
PNKP-214ENST00000600573 STXBP5Q5T5C0 1151 aa20.3■□□□□ 0.84
PNKP-214ENST00000600573 PPP2R2DQ66LE6 453 aa20.3■□□□□ 0.84
PNKP-214ENST00000600573 DENND5AQ6IQ26 1287 aa20.3■□□□□ 0.84
PNKP-214ENST00000600573 RETSATQ6NUM9 610 aa20.3■□□□□ 0.84
PNKP-214ENST00000600573 PKN3Q6P5Z2 889 aa20.3■□□□□ 0.84
PNKP-214ENST00000600573 DCAF4L2Q8NA75 395 aa20.3■□□□□ 0.84
PNKP-214ENST00000600573 PPHLN1Q8NEY8 458 aaKnown RBP20.3■□□□□ 0.84
PNKP-214ENST00000600573 ZNF707Q96C28 371 aaPredicted RBP20.3■□□□□ 0.84
PNKP-214ENST00000600573 TCEAL4Q96EI5 215 aa20.3■□□□□ 0.84
PNKP-214ENST00000600573 APOPT1Q96IL0 206 aa20.3■□□□□ 0.84
PNKP-214ENST00000600573 RANBP9Q96S59 729 aa20.3■□□□□ 0.84
PNKP-214ENST00000600573 GDF15Q99988 308 aa20.3■□□□□ 0.84
PNKP-214ENST00000600573 C2orf49Q9BVC5 232 aaPredicted RBP20.3■□□□□ 0.84
PNKP-214ENST00000600573 SFXN1Q9H9B4 322 aa20.3■□□□□ 0.84
PNKP-214ENST00000600573 SLC28A3Q9HAS3 691 aa20.3■□□□□ 0.84
PNKP-214ENST00000600573 LOC285095A0A1B0GVY8 99 aa20.29■□□□□ 0.84
PNKP-214ENST00000600573 MMP2P08253 660 aa20.29■□□□□ 0.84
PNKP-214ENST00000600573 RPA3P35244 121 aaPredicted RBP20.29■□□□□ 0.84
PNKP-214ENST00000600573 PLK1P53350 603 aa20.29■□□□□ 0.84
PNKP-214ENST00000600573 WDR4P57081 412 aaKnown RBP20.29■□□□□ 0.84
PNKP-214ENST00000600573 SLC20A2Q08357 652 aa20.29■□□□□ 0.84
PNKP-214ENST00000600573 OLIG2Q13516 323 aa20.29■□□□□ 0.84
PNKP-214ENST00000600573 CERCAMQ5T4B2 595 aa20.29■□□□□ 0.84
PNKP-214ENST00000600573 HHATQ5VTY9 493 aa20.29■□□□□ 0.84
PNKP-214ENST00000600573 NLRP9Q7RTR0 991 aa20.29■□□□□ 0.84
PNKP-214ENST00000600573 GRASPQ7Z6J2 395 aaPredicted RBP20.29■□□□□ 0.84
PNKP-214ENST00000600573 CACNA2D3Q8IZS8 1091 aa20.29■□□□□ 0.84
PNKP-214ENST00000600573 PGBD5Q8N414 524 aa20.29■□□□□ 0.84
PNKP-214ENST00000600573 BANPQ8N9N5 519 aa20.29■□□□□ 0.84
PNKP-214ENST00000600573 OR52K2Q8NGK3 314 aa20.29■□□□□ 0.84
PNKP-214ENST00000600573 USP13Q92995 863 aaPredicted RBP20.29■□□□□ 0.84
PNKP-214ENST00000600573 FEM1CQ96JP0 617 aa20.29■□□□□ 0.84
PNKP-214ENST00000600573 SEMA3CQ99985 751 aa20.29■□□□□ 0.84
PNKP-214ENST00000600573 NSMCE4AQ9NXX6 385 aa20.29■□□□□ 0.84
PNKP-214ENST00000600573 PRKAG3Q9UGI9 489 aa20.29■□□□□ 0.84
PNKP-214ENST00000600573 VPS28Q9UK41 221 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms