RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 CELSR3Q9NYQ7 3312 aa16.45■□□□□ 0.22
LSM4-206ENST00000600289 NAV2Q8IVL1 2488 aa16.45■□□□□ 0.22
LSM4-206ENST00000600289 CYSRT1A8MQ03 144 aa16.45■□□□□ 0.22
LSM4-206ENST00000600289 PATE3B3GLJ2 98 aa16.45■□□□□ 0.22
LSM4-206ENST00000600289 PLRG1O43660 514 aaKnown RBP16.45■□□□□ 0.22
LSM4-206ENST00000600289 BUB1O43683 1085 aa16.45■□□□□ 0.22
LSM4-206ENST00000600289 TMCC1O94876 653 aa16.45■□□□□ 0.22
LSM4-206ENST00000600289 IGHV4-34P06331 123 aa16.45■□□□□ 0.22
LSM4-206ENST00000600289 KRT7P08729 469 aa16.45■□□□□ 0.22
LSM4-206ENST00000600289 GNSP15586 552 aa16.45■□□□□ 0.22
LSM4-206ENST00000600289 CCR5P51681 352 aa16.45■□□□□ 0.22
LSM4-206ENST00000600289 CCNHP51946 323 aaPredicted RBP16.45■□□□□ 0.22
LSM4-206ENST00000600289 METAP1P53582 386 aa16.45■□□□□ 0.22
LSM4-206ENST00000600289 SNRPD1P62314 119 aaKnown RBP16.45■□□□□ 0.22
LSM4-206ENST00000600289 CCDC15Q0P6D6 951 aa16.45■□□□□ 0.22
LSM4-206ENST00000600289 CNTN1Q12860 1018 aa16.45■□□□□ 0.22
LSM4-206ENST00000600289 KIAA0895LQ68EN5 471 aa16.45■□□□□ 0.22
LSM4-206ENST00000600289 TCEAL6Q6IPX3 200 aa16.45■□□□□ 0.22
LSM4-206ENST00000600289 RGL4Q8IZJ4 473 aa16.45■□□□□ 0.22
LSM4-206ENST00000600289 CHST14Q8NCH0 376 aa16.45■□□□□ 0.22
LSM4-206ENST00000600289 OR2AP1Q8NGE2 309 aa16.45■□□□□ 0.22
LSM4-206ENST00000600289 GANCQ8TET4 914 aa16.45■□□□□ 0.22
LSM4-206ENST00000600289 TCEAL3Q969E4 200 aa16.45■□□□□ 0.22
LSM4-206ENST00000600289 VOPP1Q96AW1 172 aa16.45■□□□□ 0.22
LSM4-206ENST00000600289 BIRC7Q96CA5 298 aa16.45■□□□□ 0.22
LSM4-206ENST00000600289 PPP1R16AQ96I34 528 aa16.45■□□□□ 0.22
LSM4-206ENST00000600289 HEPHQ9BQS7 1158 aa16.45■□□□□ 0.22
LSM4-206ENST00000600289 ZNF670Q9BS34 389 aa16.45■□□□□ 0.22
LSM4-206ENST00000600289 HDAC8Q9BY41 377 aa16.45■□□□□ 0.22
LSM4-206ENST00000600289 LUC7LQ9NQ29 371 aaKnown RBP16.45■□□□□ 0.22
LSM4-206ENST00000600289 MFHAS1Q9Y4C4 1052 aa16.45■□□□□ 0.22
LSM4-206ENST00000600289 ACTL7AQ9Y615 435 aa16.45■□□□□ 0.22
LSM4-206ENST00000600289 TMEM131Q92545 1883 aa16.45■□□□□ 0.22
LSM4-206ENST00000600289 A0A0A6YYK5 440 aaPredicted RBP16.44■□□□□ 0.22
LSM4-206ENST00000600289 A0A1B0GTW7 788 aa16.44■□□□□ 0.22
LSM4-206ENST00000600289 BNIP3LO60238 219 aa16.44■□□□□ 0.22
LSM4-206ENST00000600289 IL4RP24394 825 aa16.44■□□□□ 0.22
LSM4-206ENST00000600289 ITGB7P26010 798 aa16.44■□□□□ 0.22
LSM4-206ENST00000600289 CD27P26842 260 aa16.44■□□□□ 0.22
LSM4-206ENST00000600289 SERPINB6P35237 376 aa16.44■□□□□ 0.22
LSM4-206ENST00000600289 MAGEA1P43355 309 aa16.44■□□□□ 0.22
LSM4-206ENST00000600289 PAPOLAP51003 745 aaKnown RBP16.44■□□□□ 0.22
LSM4-206ENST00000600289 IL10RBQ08334 325 aa16.44■□□□□ 0.22
LSM4-206ENST00000600289 RFTN1Q14699 578 aaPredicted RBP16.44■□□□□ 0.22
LSM4-206ENST00000600289 PDK2Q15119 407 aa16.44■□□□□ 0.22
LSM4-206ENST00000600289 PIP5KL1Q5T9C9 394 aa16.44■□□□□ 0.22
LSM4-206ENST00000600289 TMCO3Q6UWJ1 677 aa16.44■□□□□ 0.22
LSM4-206ENST00000600289 VSIG1Q86XK7 387 aa16.44■□□□□ 0.22
LSM4-206ENST00000600289 ZNF354CQ86Y25 554 aa16.44■□□□□ 0.22
LSM4-206ENST00000600289 FAF2Q96CS3 445 aa16.44■□□□□ 0.22
LSM4-206ENST00000600289 CELF6Q96J87 481 aaKnown RBP16.44■□□□□ 0.22
LSM4-206ENST00000600289 GDAP1L1Q96MZ0 367 aa16.44■□□□□ 0.22
LSM4-206ENST00000600289 ORAI3Q9BRQ5 295 aa16.44■□□□□ 0.22
LSM4-206ENST00000600289 EDEM2Q9BV94 578 aa16.44■□□□□ 0.22
LSM4-206ENST00000600289 OSBPL1AQ9BXW6 950 aa16.44■□□□□ 0.22
LSM4-206ENST00000600289 UBA2Q9UBT2 640 aaPredicted RBP16.44■□□□□ 0.22
LSM4-206ENST00000600289 ZNF487B1APH4 448 aa16.43■□□□□ 0.22
LSM4-206ENST00000600289 KPNA3O00505 521 aaPredicted RBP16.43■□□□□ 0.22
LSM4-206ENST00000600289 LATO43561 262 aa16.43■□□□□ 0.22
LSM4-206ENST00000600289 LEFTY1O75610 366 aa16.43■□□□□ 0.22
LSM4-206ENST00000600289 IGSF6O95976 241 aa16.43■□□□□ 0.22
LSM4-206ENST00000600289 AMPD1P23109 780 aa16.43■□□□□ 0.22
LSM4-206ENST00000600289 NUDT1P36639 197 aa16.43■□□□□ 0.22
LSM4-206ENST00000600289 SLC1A1P43005 524 aa16.43■□□□□ 0.22
LSM4-206ENST00000600289 CDH6P55285 790 aa16.43■□□□□ 0.22
LSM4-206ENST00000600289 TAS2R40P59535 323 aa16.43■□□□□ 0.22
LSM4-206ENST00000600289 IRX4P78413 519 aa16.43■□□□□ 0.22
LSM4-206ENST00000600289 DPYSL3Q14195 570 aa16.43■□□□□ 0.22
LSM4-206ENST00000600289 KRT81Q14533 505 aa16.43■□□□□ 0.22
LSM4-206ENST00000600289 MESDQ14696 234 aa16.43■□□□□ 0.22
LSM4-206ENST00000600289 ARSIQ5FYB1 569 aa16.43■□□□□ 0.22
LSM4-206ENST00000600289 LRRC38Q5VT99 294 aa16.43■□□□□ 0.22
LSM4-206ENST00000600289 NCEH1Q6PIU2 408 aa16.43■□□□□ 0.22
LSM4-206ENST00000600289 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.43■□□□□ 0.22
LSM4-206ENST00000600289 TRIM69Q86WT6 500 aa16.43■□□□□ 0.22
LSM4-206ENST00000600289 CPNE8Q86YQ8 564 aa16.43■□□□□ 0.22
LSM4-206ENST00000600289 ARRDC3Q96B67 414 aa16.43■□□□□ 0.22
LSM4-206ENST00000600289 ZNF599Q96NL3 588 aa16.43■□□□□ 0.22
LSM4-206ENST00000600289 TM6SF2Q9BZW4 377 aa16.43■□□□□ 0.22
LSM4-206ENST00000600289 PREBQ9HCU5 417 aa16.43■□□□□ 0.22
LSM4-206ENST00000600289 DYRK4Q9NR20 520 aa16.43■□□□□ 0.22
LSM4-206ENST00000600289 HECAQ9UBI9 543 aaPredicted RBP16.43■□□□□ 0.22
LSM4-206ENST00000600289 LHX3Q9UBR4 397 aa16.43■□□□□ 0.22
LSM4-206ENST00000600289 EIF2B4Q9UI10 523 aaKnown RBP16.43■□□□□ 0.22
LSM4-206ENST00000600289 DOCK9Q9BZ29 2069 aa16.42■□□□□ 0.22
LSM4-206ENST00000600289 A0A1W2PPC4 97 aa16.42■□□□□ 0.22
LSM4-206ENST00000600289 J3KR12 359 aa16.42■□□□□ 0.22
LSM4-206ENST00000600289 RNF103O00237 685 aa16.42■□□□□ 0.22
LSM4-206ENST00000600289 BCAT2O15382 392 aaPredicted RBP16.42■□□□□ 0.22
LSM4-206ENST00000600289 NDUFA10O95299 355 aa16.42■□□□□ 0.22
LSM4-206ENST00000600289 POP4O95707 220 aaKnown RBP16.42■□□□□ 0.22
LSM4-206ENST00000600289 ENGP17813 658 aa16.42■□□□□ 0.22
LSM4-206ENST00000600289 MAOBP27338 520 aa16.42■□□□□ 0.22
LSM4-206ENST00000600289 SSR1P43307 286 aaKnown RBP16.42■□□□□ 0.22
LSM4-206ENST00000600289 CSNK1DP48730 415 aa16.42■□□□□ 0.22
LSM4-206ENST00000600289 TAS2R38P59533 333 aa16.42■□□□□ 0.22
LSM4-206ENST00000600289 CYTH1Q15438 398 aa16.42■□□□□ 0.22
LSM4-206ENST00000600289 SPA17Q15506 151 aa16.42■□□□□ 0.22
LSM4-206ENST00000600289 MYLK3Q32MK0 819 aa16.42■□□□□ 0.22
LSM4-206ENST00000600289 TMCO4Q5TGY1 634 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms