RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 MAPK15Q8TD08 544 aa11.68□□□□□ -0.54
ARHGEF1-220ENST00000600274 TUBB6Q9BUF5 446 aa11.68□□□□□ -0.54
ARHGEF1-220ENST00000600274 PAPOLBQ9NRJ5 636 aaKnown RBP11.68□□□□□ -0.54
ARHGEF1-220ENST00000600274 RRN3Q9NYV6 651 aa11.68□□□□□ -0.54
ARHGEF1-220ENST00000600274 STOML1Q9UBI4 398 aa11.68□□□□□ -0.54
ARHGEF1-220ENST00000600274 TMEM88BA6NKF7 163 aa11.68□□□□□ -0.54
ARHGEF1-220ENST00000600274 TSPAN3O60637 253 aa11.68□□□□□ -0.54
ARHGEF1-220ENST00000600274 MAFKO60675 156 aa11.68□□□□□ -0.54
ARHGEF1-220ENST00000600274 TRIM13O60858 407 aa11.68□□□□□ -0.54
ARHGEF1-220ENST00000600274 GSRP00390 522 aa11.68□□□□□ -0.54
ARHGEF1-220ENST00000600274 STMN1P16949 149 aa11.68□□□□□ -0.54
ARHGEF1-220ENST00000600274 ABL2P42684 1182 aa11.68□□□□□ -0.54
ARHGEF1-220ENST00000600274 SLC1A2P43004 574 aa11.68□□□□□ -0.54
ARHGEF1-220ENST00000600274 GALNT3Q14435 633 aa11.68□□□□□ -0.54
ARHGEF1-220ENST00000600274 TAF12Q16514 161 aa11.68□□□□□ -0.54
ARHGEF1-220ENST00000600274 ANO4Q32M45 955 aa11.68□□□□□ -0.54
ARHGEF1-220ENST00000600274 SPOUT1Q5T280 376 aaKnown RBP11.68□□□□□ -0.54
ARHGEF1-220ENST00000600274 PIK3R6Q5UE93 754 aa11.68□□□□□ -0.54
ARHGEF1-220ENST00000600274 MARC1Q5VT66 337 aa11.68□□□□□ -0.54
ARHGEF1-220ENST00000600274 PRSS55Q6UWB4 352 aaPredicted RBP11.68□□□□□ -0.54
ARHGEF1-220ENST00000600274 MAVSQ7Z434 540 aa11.68□□□□□ -0.54
ARHGEF1-220ENST00000600274 DEFB128Q7Z7B8 93 aa11.68□□□□□ -0.54
ARHGEF1-220ENST00000600274 CEP97Q8IW35 865 aa11.68□□□□□ -0.54
ARHGEF1-220ENST00000600274 ULK2Q8IYT8 1036 aa11.68□□□□□ -0.54
ARHGEF1-220ENST00000600274 NUP93Q8N1F7 819 aa11.68□□□□□ -0.54
ARHGEF1-220ENST00000600274 SUSD3Q96L08 255 aa11.68□□□□□ -0.54
ARHGEF1-220ENST00000600274 CCSER2Q9H7U1 834 aa11.68□□□□□ -0.54
ARHGEF1-220ENST00000600274 MARCH2Q9P0N8 246 aa11.68□□□□□ -0.54
ARHGEF1-220ENST00000600274 SOX13Q9UN79 622 aa11.68□□□□□ -0.54
ARHGEF1-220ENST00000600274 ACOT9Q9Y305 439 aa11.68□□□□□ -0.54
ARHGEF1-220ENST00000600274 MYO7AQ13402 2215 aa11.68□□□□□ -0.54
ARHGEF1-220ENST00000600274 KLF11O14901 512 aa11.67□□□□□ -0.54
ARHGEF1-220ENST00000600274 SNNO75324 88 aaPredicted RBP11.67□□□□□ -0.54
ARHGEF1-220ENST00000600274 SKIP12755 728 aa11.67□□□□□ -0.54
ARHGEF1-220ENST00000600274 OR1E1P30953 314 aa11.67□□□□□ -0.54
ARHGEF1-220ENST00000600274 ARL1P40616 181 aaPredicted RBP11.67□□□□□ -0.54
ARHGEF1-220ENST00000600274 COPAP53621 1224 aa11.67□□□□□ -0.54
ARHGEF1-220ENST00000600274 TAS2R39P59534 338 aa11.67□□□□□ -0.54
ARHGEF1-220ENST00000600274 MGAT3Q09327 533 aa11.67□□□□□ -0.54
ARHGEF1-220ENST00000600274 ARL13AQ5H913 290 aaPredicted RBP11.67□□□□□ -0.54
ARHGEF1-220ENST00000600274 PKN3Q6P5Z2 889 aa11.67□□□□□ -0.54
ARHGEF1-220ENST00000600274 CD300LGQ6UXG3 332 aa11.67□□□□□ -0.54
ARHGEF1-220ENST00000600274 LINC00523Q86TU6 105 aa11.67□□□□□ -0.54
ARHGEF1-220ENST00000600274 FSTL5Q8N475 847 aaPredicted RBP11.67□□□□□ -0.54
ARHGEF1-220ENST00000600274 KLHDC9Q8NEP7 349 aa11.67□□□□□ -0.54
ARHGEF1-220ENST00000600274 DBF4BQ8NFT6 615 aa11.67□□□□□ -0.54
ARHGEF1-220ENST00000600274 MAGEC3Q8TD91 643 aa11.67□□□□□ -0.54
ARHGEF1-220ENST00000600274 ACMSDQ8TDX5 336 aa11.67□□□□□ -0.54
ARHGEF1-220ENST00000600274 USP13Q92995 863 aaPredicted RBP11.67□□□□□ -0.54
ARHGEF1-220ENST00000600274 SORT1Q99523 831 aa11.67□□□□□ -0.54
ARHGEF1-220ENST00000600274 GPR62Q9BZJ7 368 aa11.67□□□□□ -0.54
ARHGEF1-220ENST00000600274 DCLRE1BQ9H816 532 aa11.67□□□□□ -0.54
ARHGEF1-220ENST00000600274 BPTFQ12830 3046 aa11.67□□□□□ -0.54
ARHGEF1-220ENST00000600274 TBX10O75333 385 aa11.67□□□□□ -0.54
ARHGEF1-220ENST00000600274 GABRB3P28472 473 aa11.67□□□□□ -0.54
ARHGEF1-220ENST00000600274 ACVRL1P37023 503 aa11.67□□□□□ -0.54
ARHGEF1-220ENST00000600274 CCL23P55773 120 aa11.67□□□□□ -0.54
ARHGEF1-220ENST00000600274 PCID2Q5JVF3 399 aa11.67□□□□□ -0.54
ARHGEF1-220ENST00000600274 PPM1LQ5SGD2 360 aa11.67□□□□□ -0.54
ARHGEF1-220ENST00000600274 TMPRSS6Q8IU80 811 aa11.67□□□□□ -0.54
ARHGEF1-220ENST00000600274 DCP1BQ8IZD4 617 aaKnown RBP11.67□□□□□ -0.54
ARHGEF1-220ENST00000600274 PCSK9Q8NBP7 692 aaKnown RBP11.67□□□□□ -0.54
ARHGEF1-220ENST00000600274 NAT14Q8WUY8 206 aa11.67□□□□□ -0.54
ARHGEF1-220ENST00000600274 SCG3Q8WXD2 468 aaKnown RBP11.67□□□□□ -0.54
ARHGEF1-220ENST00000600274 ZNF512Q96ME7 567 aaPredicted RBP11.67□□□□□ -0.54
ARHGEF1-220ENST00000600274 SERPINB11Q96P15 392 aa11.67□□□□□ -0.54
ARHGEF1-220ENST00000600274 CSNK1G1Q9HCP0 422 aa11.67□□□□□ -0.54
ARHGEF1-220ENST00000600274 SMPD4Q9NXE4 827 aa11.67□□□□□ -0.54
ARHGEF1-220ENST00000600274 UXTQ9UBK9 157 aaPredicted RBP11.67□□□□□ -0.54
ARHGEF1-220ENST00000600274 A0A0U1RQS6 177 aa11.67□□□□□ -0.54
ARHGEF1-220ENST00000600274 UBA6A0AVT1 1052 aaPredicted RBP11.67□□□□□ -0.54
ARHGEF1-220ENST00000600274 PSMG1O95456 288 aa11.67□□□□□ -0.54
ARHGEF1-220ENST00000600274 ENO3P13929 434 aaPredicted RBP11.67□□□□□ -0.54
ARHGEF1-220ENST00000600274 KCNQ1P51787 676 aa11.67□□□□□ -0.54
ARHGEF1-220ENST00000600274 GEMP55040 296 aa11.67□□□□□ -0.54
ARHGEF1-220ENST00000600274 PM20D1Q6GTS8 502 aa11.67□□□□□ -0.54
ARHGEF1-220ENST00000600274 NEPROQ6NW34 567 aa11.67□□□□□ -0.54
ARHGEF1-220ENST00000600274 TIFABQ6ZNK6 161 aa11.67□□□□□ -0.54
ARHGEF1-220ENST00000600274 SLC24A5Q71RS6 500 aa11.67□□□□□ -0.54
ARHGEF1-220ENST00000600274 TMC7Q7Z402 723 aa11.67□□□□□ -0.54
ARHGEF1-220ENST00000600274 ZC3HC1Q86WB0 502 aaKnown RBP11.67□□□□□ -0.54
ARHGEF1-220ENST00000600274 SCLYQ96I15 445 aa11.67□□□□□ -0.54
ARHGEF1-220ENST00000600274 TMEM165Q9HC07 324 aa11.67□□□□□ -0.54
ARHGEF1-220ENST00000600274 LNPEPQ9UIQ6 1025 aa11.67□□□□□ -0.54
ARHGEF1-220ENST00000600274 PCDHB5Q9Y5E4 795 aa11.67□□□□□ -0.54
ARHGEF1-220ENST00000600274 MATN3O15232 486 aa11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 MAP3K7O43318 606 aa11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 PQBP1O60828 265 aaKnown RBP11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 SERPINA6P08185 405 aa11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 GRK2P25098 689 aa11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 YWHAQP27348 245 aa11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 NUDT2P50583 147 aa11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 AIF1P55008 147 aa11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 NME5P56597 212 aa11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 SP3Q02447 781 aa11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 MBTPS1Q14703 1052 aa11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 KCTD11Q693B1 232 aa11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 ZNF483Q8TF39 744 aaPredicted RBP11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 IGSF8Q969P0 613 aa11.66□□□□□ -0.54
ARHGEF1-220ENST00000600274 IFT43Q96FT9 208 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms