RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 VAMP7P51809 220 aa17.97■□□□□ 0.47
SSBP4-207ENST00000600244 TMPRSS9Q7Z410 1059 aa17.97■□□□□ 0.47
SSBP4-207ENST00000600244 CHSY1Q86X52 802 aa17.97■□□□□ 0.47
SSBP4-207ENST00000600244 CIR1Q86X95 450 aaPredicted RBP17.97■□□□□ 0.47
SSBP4-207ENST00000600244 CHST14Q8NCH0 376 aa17.97■□□□□ 0.47
SSBP4-207ENST00000600244 OR6C4Q8NGE1 309 aa17.97■□□□□ 0.47
SSBP4-207ENST00000600244 ASB12Q8WXK4 309 aa17.97■□□□□ 0.47
SSBP4-207ENST00000600244 SIRPGQ9P1W8 387 aa17.97■□□□□ 0.47
SSBP4-207ENST00000600244 HESX1Q9UBX0 185 aa17.97■□□□□ 0.47
SSBP4-207ENST00000600244 HS3ST2Q9Y278 367 aa17.97■□□□□ 0.47
SSBP4-207ENST00000600244 FARP1Q9Y4F1 1045 aaPredicted RBP17.97■□□□□ 0.47
SSBP4-207ENST00000600244 FADS3Q9Y5Q0 445 aa17.97■□□□□ 0.47
SSBP4-207ENST00000600244 RNF215Q9Y6U7 377 aa17.97■□□□□ 0.47
SSBP4-207ENST00000600244 SETD2Q9BYW2 2564 aaPredicted RBP17.96■□□□□ 0.47
SSBP4-207ENST00000600244 NKX2-8O15522 239 aa17.96■□□□□ 0.47
SSBP4-207ENST00000600244 MT-CO1P00395 513 aa17.96■□□□□ 0.47
SSBP4-207ENST00000600244 PRKCGP05129 697 aa17.96■□□□□ 0.47
SSBP4-207ENST00000600244 SETSIPP0DME0 302 aa17.96■□□□□ 0.47
SSBP4-207ENST00000600244 RECQLP46063 649 aaPredicted RBP17.96■□□□□ 0.47
SSBP4-207ENST00000600244 PNOCQ13519 176 aa17.96■□□□□ 0.47
SSBP4-207ENST00000600244 PTK2BQ14289 1009 aa17.96■□□□□ 0.47
SSBP4-207ENST00000600244 C16orf72Q14CZ0 275 aa17.96■□□□□ 0.47
SSBP4-207ENST00000600244 FAXCQ5TGI0 409 aa17.96■□□□□ 0.47
SSBP4-207ENST00000600244 CCNJLQ8IV13 435 aa17.96■□□□□ 0.47
SSBP4-207ENST00000600244 GALNT11Q8NCW6 608 aa17.96■□□□□ 0.47
SSBP4-207ENST00000600244 CLEC4CQ8WTT0 213 aa17.96■□□□□ 0.47
SSBP4-207ENST00000600244 SLC35F5Q8WV83 523 aa17.96■□□□□ 0.47
SSBP4-207ENST00000600244 CCDC34Q96HJ3 373 aa17.96■□□□□ 0.47
SSBP4-207ENST00000600244 PPP1R9BQ96SB3 815 aa17.96■□□□□ 0.47
SSBP4-207ENST00000600244 PRMT1Q99873 361 aaKnown RBP17.96■□□□□ 0.47
SSBP4-207ENST00000600244 KCTD10Q9H3F6 313 aa17.96■□□□□ 0.47
SSBP4-207ENST00000600244 APPL1Q9UKG1 709 aa17.96■□□□□ 0.47
SSBP4-207ENST00000600244 PCDHGA3Q9Y5H0 932 aa17.96■□□□□ 0.47
SSBP4-207ENST00000600244 TCAF2A6NFQ2 919 aa17.95■□□□□ 0.46
SSBP4-207ENST00000600244 VPS4BO75351 444 aa17.95■□□□□ 0.46
SSBP4-207ENST00000600244 NR3C1P04150 777 aa17.95■□□□□ 0.46
SSBP4-207ENST00000600244 TRIM49P0CI25 452 aa17.95■□□□□ 0.46
SSBP4-207ENST00000600244 TRIM49CP0CI26 452 aa17.95■□□□□ 0.46
SSBP4-207ENST00000600244 CCL4P13236 92 aa17.95■□□□□ 0.46
SSBP4-207ENST00000600244 UGT1A3P35503 534 aa17.95■□□□□ 0.46
SSBP4-207ENST00000600244 ARSIQ5FYB1 569 aa17.95■□□□□ 0.46
SSBP4-207ENST00000600244 PMF1Q6P1K2 205 aa17.95■□□□□ 0.46
SSBP4-207ENST00000600244 MAMDC2Q7Z304 686 aaPredicted RBP17.95■□□□□ 0.46
SSBP4-207ENST00000600244 ZSCAN30Q86W11 494 aa17.95■□□□□ 0.46
SSBP4-207ENST00000600244 FSTL5Q8N475 847 aaPredicted RBP17.95■□□□□ 0.46
SSBP4-207ENST00000600244 IL22RA1Q8N6P7 574 aa17.95■□□□□ 0.46
SSBP4-207ENST00000600244 CCDC150Q8NCX0 1101 aa17.95■□□□□ 0.46
SSBP4-207ENST00000600244 DENND6BQ8NEG7 585 aa17.95■□□□□ 0.46
SSBP4-207ENST00000600244 PCDH19Q8TAB3 1148 aa17.95■□□□□ 0.46
SSBP4-207ENST00000600244 SCG3Q8WXD2 468 aaKnown RBP17.95■□□□□ 0.46
SSBP4-207ENST00000600244 SEMA4DQ92854 862 aa17.95■□□□□ 0.46
SSBP4-207ENST00000600244 RNF34Q969K3 372 aa17.95■□□□□ 0.46
SSBP4-207ENST00000600244 SLC45A3Q96JT2 553 aa17.95■□□□□ 0.46
SSBP4-207ENST00000600244 BTN2A3PQ96KV6 586 aa17.95■□□□□ 0.46
SSBP4-207ENST00000600244 CLSTN2Q9H4D0 955 aa17.95■□□□□ 0.46
SSBP4-207ENST00000600244 VPS4AQ9UN37 437 aa17.95■□□□□ 0.46
SSBP4-207ENST00000600244 IGLON5A6NGN9 336 aa17.94■□□□□ 0.46
SSBP4-207ENST00000600244 F5H5T6 163 aa17.94■□□□□ 0.46
SSBP4-207ENST00000600244 K7ERQ8 282 aa17.94■□□□□ 0.46
SSBP4-207ENST00000600244 O00370 1275 aa17.94■□□□□ 0.46
SSBP4-207ENST00000600244 PIK3R2O00459 728 aa17.94■□□□□ 0.46
SSBP4-207ENST00000600244 MAPK13O15264 365 aa17.94■□□□□ 0.46
SSBP4-207ENST00000600244 CAPN5O15484 640 aaPredicted RBP17.94■□□□□ 0.46
SSBP4-207ENST00000600244 AP1G1O43747 822 aa17.94■□□□□ 0.46
SSBP4-207ENST00000600244 DDAH2O95865 285 aa17.94■□□□□ 0.46
SSBP4-207ENST00000600244 ADRB3P13945 408 aa17.94■□□□□ 0.46
SSBP4-207ENST00000600244 RGS7P49802 495 aa17.94■□□□□ 0.46
SSBP4-207ENST00000600244 NEK3P51956 506 aa17.94■□□□□ 0.46
SSBP4-207ENST00000600244 THOP1P52888 689 aa17.94■□□□□ 0.46
SSBP4-207ENST00000600244 SGCGQ13326 291 aa17.94■□□□□ 0.46
SSBP4-207ENST00000600244 ESPL1Q14674 2120 aa17.94■□□□□ 0.46
SSBP4-207ENST00000600244 ZC3H12AQ5D1E8 599 aaKnown RBP17.94■□□□□ 0.46
SSBP4-207ENST00000600244 SRRM1Q8IYB3 904 aaKnown RBP17.94■□□□□ 0.46
SSBP4-207ENST00000600244 APOBEC4Q8WW27 367 aaKnown RBP17.94■□□□□ 0.46
SSBP4-207ENST00000600244 CENPTQ96BT3 561 aa17.94■□□□□ 0.46
SSBP4-207ENST00000600244 CCDC114Q96M63 670 aa17.94■□□□□ 0.46
SSBP4-207ENST00000600244 SEMA6CQ9H3T2 930 aa17.94■□□□□ 0.46
SSBP4-207ENST00000600244 HOOK1Q9UJC3 728 aaKnown RBP17.94■□□□□ 0.46
SSBP4-207ENST00000600244 TP53TG5Q9Y2B4 290 aa17.94■□□□□ 0.46
SSBP4-207ENST00000600244 F8P00451 2351 aa17.94■□□□□ 0.46
SSBP4-207ENST00000600244 K7EM74 188 aa17.93■□□□□ 0.46
SSBP4-207ENST00000600244 M0QYT0 321 aa17.93■□□□□ 0.46
SSBP4-207ENST00000600244 PDXKO00764 312 aa17.93■□□□□ 0.46
SSBP4-207ENST00000600244 DUX1O43812 170 aa17.93■□□□□ 0.46
SSBP4-207ENST00000600244 RHOBTB3O94955 611 aa17.93■□□□□ 0.46
SSBP4-207ENST00000600244 CLDN1O95832 211 aa17.93■□□□□ 0.46
SSBP4-207ENST00000600244 YPEL5P62699 121 aa17.93■□□□□ 0.46
SSBP4-207ENST00000600244 PPARDQ03181 441 aa17.93■□□□□ 0.46
SSBP4-207ENST00000600244 ELOCQ15369 112 aa17.93■□□□□ 0.46
SSBP4-207ENST00000600244 EFHC2Q5JST6 749 aa17.93■□□□□ 0.46
SSBP4-207ENST00000600244 TTC39BQ5VTQ0 682 aaPredicted RBP17.93■□□□□ 0.46
SSBP4-207ENST00000600244 CEP135Q66GS9 1140 aa17.93■□□□□ 0.46
SSBP4-207ENST00000600244 TAC4Q86UU9 113 aa17.93■□□□□ 0.46
SSBP4-207ENST00000600244 Q8N9G6 341 aaPredicted RBP17.93■□□□□ 0.46
SSBP4-207ENST00000600244 TEX19Q8NA77 164 aa17.93■□□□□ 0.46
SSBP4-207ENST00000600244 GPR156Q8NFN8 814 aa17.93■□□□□ 0.46
SSBP4-207ENST00000600244 PMEPA1Q969W9 287 aa17.93■□□□□ 0.46
SSBP4-207ENST00000600244 EEF2KMTQ96G04 330 aa17.93■□□□□ 0.46
SSBP4-207ENST00000600244 PPP1R16AQ96I34 528 aa17.93■□□□□ 0.46
SSBP4-207ENST00000600244 GSDMAQ96QA5 445 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms