RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 KIAA1211LQ6NV74 962 aa12.83□□□□□ -0.36
CHMP2A-206ENST00000600118 CCDC137Q6PK04 289 aaKnown RBP12.83□□□□□ -0.36
CHMP2A-206ENST00000600118 TMEM92Q6UXU6 159 aa12.83□□□□□ -0.36
CHMP2A-206ENST00000600118 SPEM1Q8N4L4 309 aa12.83□□□□□ -0.36
CHMP2A-206ENST00000600118 CHST14Q8NCH0 376 aa12.83□□□□□ -0.36
CHMP2A-206ENST00000600118 SLCO2A1Q92959 643 aa12.83□□□□□ -0.36
CHMP2A-206ENST00000600118 TADA1Q96BN2 335 aa12.83□□□□□ -0.36
CHMP2A-206ENST00000600118 EXOC2Q96KP1 924 aa12.83□□□□□ -0.36
CHMP2A-206ENST00000600118 NSMCE3Q96MG7 304 aa12.83□□□□□ -0.36
CHMP2A-206ENST00000600118 GDAP1L1Q96MZ0 367 aa12.83□□□□□ -0.36
CHMP2A-206ENST00000600118 AGAP3Q96P47 875 aa12.83□□□□□ -0.36
CHMP2A-206ENST00000600118 NUDCD1Q96RS6 583 aa12.83□□□□□ -0.36
CHMP2A-206ENST00000600118 FAM129BQ96TA1 746 aa12.83□□□□□ -0.36
CHMP2A-206ENST00000600118 FERMT1Q9BQL6 677 aa12.83□□□□□ -0.36
CHMP2A-206ENST00000600118 POLR1EQ9GZS1 481 aaKnown RBP12.83□□□□□ -0.36
CHMP2A-206ENST00000600118 DDX47Q9H0S4 455 aaKnown RBP12.83□□□□□ -0.36
CHMP2A-206ENST00000600118 GLOD4Q9HC38 313 aa12.83□□□□□ -0.36
CHMP2A-206ENST00000600118 POLR3BQ9NW08 1133 aaPredicted RBP12.83□□□□□ -0.36
CHMP2A-206ENST00000600118 C2orf42Q9NWW7 574 aa12.83□□□□□ -0.36
CHMP2A-206ENST00000600118 KLHL8Q9P2G9 620 aaPredicted RBP12.83□□□□□ -0.36
CHMP2A-206ENST00000600118 PCYOX1Q9UHG3 505 aa12.83□□□□□ -0.36
CHMP2A-206ENST00000600118 ALOX15BO15296 676 aa12.82□□□□□ -0.36
CHMP2A-206ENST00000600118 SYNCRIPO60506 623 aaKnown RBP12.82□□□□□ -0.36
CHMP2A-206ENST00000600118 STK10O94804 968 aaKnown RBP12.82□□□□□ -0.36
CHMP2A-206ENST00000600118 POP4O95707 220 aaKnown RBP12.82□□□□□ -0.36
CHMP2A-206ENST00000600118 IGSF6O95976 241 aa12.82□□□□□ -0.36
CHMP2A-206ENST00000600118 CES1P23141 567 aa12.82□□□□□ -0.36
CHMP2A-206ENST00000600118 PTGIRP43119 386 aa12.82□□□□□ -0.36
CHMP2A-206ENST00000600118 COPAP53621 1224 aa12.82□□□□□ -0.36
CHMP2A-206ENST00000600118 AP1S1P61966 158 aa12.82□□□□□ -0.36
CHMP2A-206ENST00000600118 DSC2Q02487 901 aa12.82□□□□□ -0.36
CHMP2A-206ENST00000600118 LMNB2Q03252 620 aa12.82□□□□□ -0.36
CHMP2A-206ENST00000600118 MTAPQ13126 283 aa12.82□□□□□ -0.36
CHMP2A-206ENST00000600118 STARD3Q14849 445 aa12.82□□□□□ -0.36
CHMP2A-206ENST00000600118 SLC14A2Q15849 920 aa12.82□□□□□ -0.36
CHMP2A-206ENST00000600118 MYLK3Q32MK0 819 aa12.82□□□□□ -0.36
CHMP2A-206ENST00000600118 NCEH1Q6PIU2 408 aa12.82□□□□□ -0.36
CHMP2A-206ENST00000600118 SRLQ86TD4 932 aa12.82□□□□□ -0.36
CHMP2A-206ENST00000600118 KLHDC8BQ8IXV7 354 aa12.82□□□□□ -0.36
CHMP2A-206ENST00000600118 STK40Q8N2I9 435 aa12.82□□□□□ -0.36
CHMP2A-206ENST00000600118 GLIS1Q8NBF1 620 aa12.82□□□□□ -0.36
CHMP2A-206ENST00000600118 OR2T3Q8NH03 318 aa12.82□□□□□ -0.36
CHMP2A-206ENST00000600118 CCDC110Q8TBZ0 833 aa12.82□□□□□ -0.36
CHMP2A-206ENST00000600118 PBXIP1Q96AQ6 731 aa12.82□□□□□ -0.36
CHMP2A-206ENST00000600118 IMP4Q96G21 291 aaKnown RBP12.82□□□□□ -0.36
CHMP2A-206ENST00000600118 CCDC114Q96M63 670 aa12.82□□□□□ -0.36
CHMP2A-206ENST00000600118 SEMA3CQ99985 751 aa12.82□□□□□ -0.36
CHMP2A-206ENST00000600118 GORASP1Q9BQQ3 440 aa12.82□□□□□ -0.36
CHMP2A-206ENST00000600118 HEPHQ9BQS7 1158 aa12.82□□□□□ -0.36
CHMP2A-206ENST00000600118 CPEB1Q9BZB8 566 aaKnown RBP12.82□□□□□ -0.36
CHMP2A-206ENST00000600118 SLC25A51Q9H1U9 297 aa12.82□□□□□ -0.36
CHMP2A-206ENST00000600118 RSPH9Q9H1X1 276 aaPredicted RBP12.82□□□□□ -0.36
CHMP2A-206ENST00000600118 FBRSQ9HAH7 460 aa12.82□□□□□ -0.36
CHMP2A-206ENST00000600118 NOD2Q9HC29 1040 aa12.82□□□□□ -0.36
CHMP2A-206ENST00000600118 C11orf16Q9NQ32 467 aa12.82□□□□□ -0.36
CHMP2A-206ENST00000600118 HAUS2Q9NVX0 235 aa12.82□□□□□ -0.36
CHMP2A-206ENST00000600118 FEZ2Q9UHY8 353 aaPredicted RBP12.82□□□□□ -0.36
CHMP2A-206ENST00000600118 PPM1HQ9ULR3 514 aa12.82□□□□□ -0.36
CHMP2A-206ENST00000600118 WASF2Q9Y6W5 498 aa12.82□□□□□ -0.36
CHMP2A-206ENST00000600118 MUC3AQ02505 3323 aa12.82□□□□□ -0.36
CHMP2A-206ENST00000600118 TTC24A2A3L6 582 aaPredicted RBP12.81□□□□□ -0.36
CHMP2A-206ENST00000600118 INSIG1O15503 277 aa12.81□□□□□ -0.36
CHMP2A-206ENST00000600118 NEBLO76041 1014 aa12.81□□□□□ -0.36
CHMP2A-206ENST00000600118 PAPSS2O95340 614 aaPredicted RBP12.81□□□□□ -0.36
CHMP2A-206ENST00000600118 IFNB1P01574 187 aa12.81□□□□□ -0.36
CHMP2A-206ENST00000600118 CTSLP07711 333 aa12.81□□□□□ -0.36
CHMP2A-206ENST00000600118 MMP2P08253 660 aa12.81□□□□□ -0.36
CHMP2A-206ENST00000600118 ETS1P14921 441 aa12.81□□□□□ -0.36
CHMP2A-206ENST00000600118 NFKB1P19838 968 aa12.81□□□□□ -0.36
CHMP2A-206ENST00000600118 GKP32189 559 aa12.81□□□□□ -0.36
CHMP2A-206ENST00000600118 MAPK8P45983 427 aa12.81□□□□□ -0.36
CHMP2A-206ENST00000600118 RECQLP46063 649 aaPredicted RBP12.81□□□□□ -0.36
CHMP2A-206ENST00000600118 SCNN1BP51168 640 aa12.81□□□□□ -0.36
CHMP2A-206ENST00000600118 DGKEP52429 567 aa12.81□□□□□ -0.36
CHMP2A-206ENST00000600118 SKOR1P84550 965 aa12.81□□□□□ -0.36
CHMP2A-206ENST00000600118 ITPRIPL1Q6GPH6 555 aa12.81□□□□□ -0.36
CHMP2A-206ENST00000600118 PID1Q7Z2X4 250 aa12.81□□□□□ -0.36
CHMP2A-206ENST00000600118 PRUNE1Q86TP1 453 aa12.81□□□□□ -0.36
CHMP2A-206ENST00000600118 PRPF39Q86UA1 669 aaKnown RBP12.81□□□□□ -0.36
CHMP2A-206ENST00000600118 KLHL7Q8IXQ5 586 aa12.81□□□□□ -0.36
CHMP2A-206ENST00000600118 FBXL6Q8N531 539 aa12.81□□□□□ -0.36
CHMP2A-206ENST00000600118 TMEM105Q8N8V8 129 aa12.81□□□□□ -0.36
CHMP2A-206ENST00000600118 TMIEQ8NEW7 156 aa12.81□□□□□ -0.36
CHMP2A-206ENST00000600118 OR6K2Q8NGY2 324 aa12.81□□□□□ -0.36
CHMP2A-206ENST00000600118 OR8D1Q8WZ84 308 aa12.81□□□□□ -0.36
CHMP2A-206ENST00000600118 LRIG1Q96JA1 1093 aa12.81□□□□□ -0.36
CHMP2A-206ENST00000600118 RUNDC3BQ96NL0 473 aa12.81□□□□□ -0.36
CHMP2A-206ENST00000600118 FCRL5Q96RD9 977 aa12.81□□□□□ -0.36
CHMP2A-206ENST00000600118 TUBGCP5Q96RT8 1024 aa12.81□□□□□ -0.36
CHMP2A-206ENST00000600118 MKRN2Q9H000 416 aaKnown RBP12.81□□□□□ -0.36
CHMP2A-206ENST00000600118 GBA3Q9H227 469 aa12.81□□□□□ -0.36
CHMP2A-206ENST00000600118 PCDH9Q9HC56 1237 aa12.81□□□□□ -0.36
CHMP2A-206ENST00000600118 EVLQ9UI08 416 aaPredicted RBP12.81□□□□□ -0.36
CHMP2A-206ENST00000600118 BNIP3LO60238 219 aa12.8□□□□□ -0.36
CHMP2A-206ENST00000600118 METTL18O95568 372 aa12.8□□□□□ -0.36
CHMP2A-206ENST00000600118 ECEL1O95672 775 aa12.8□□□□□ -0.36
CHMP2A-206ENST00000600118 ZSCAN5DPP0CG00 497 aa12.8□□□□□ -0.36
CHMP2A-206ENST00000600118 RPL22P35268 128 aaKnown RBP12.8□□□□□ -0.36
CHMP2A-206ENST00000600118 SATB1Q01826 763 aa12.8□□□□□ -0.36
CHMP2A-206ENST00000600118 ITKQ08881 620 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 369.8 ms