RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 GDAP1L1Q96MZ0 367 aa22.97■■□□□ 1.27
CCDC9-204ENST00000599398 DEF6Q9H4E7 631 aa22.97■■□□□ 1.27
CCDC9-204ENST00000599398 ZWILCHQ9H900 591 aa22.97■■□□□ 1.27
CCDC9-204ENST00000599398 IP6K2Q9UHH9 426 aa22.97■■□□□ 1.27
CCDC9-204ENST00000599398 TRPM6Q9BX84 2022 aa22.96■■□□□ 1.27
CCDC9-204ENST00000599398 TPRP12270 2363 aaKnown RBP22.96■■□□□ 1.27
CCDC9-204ENST00000599398 A0A1W2PQU0 124 aa22.96■■□□□ 1.27
CCDC9-204ENST00000599398 ARHGAP42A6NI28 874 aa22.96■■□□□ 1.27
CCDC9-204ENST00000599398 H0Y8X5 98 aa22.96■■□□□ 1.27
CCDC9-204ENST00000599398 POP4O95707 220 aaKnown RBP22.96■■□□□ 1.27
CCDC9-204ENST00000599398 ERCC2P18074 760 aa22.96■■□□□ 1.27
CCDC9-204ENST00000599398 IL1R2P27930 398 aa22.96■■□□□ 1.27
CCDC9-204ENST00000599398 SIM1P81133 766 aaPredicted RBP22.96■■□□□ 1.27
CCDC9-204ENST00000599398 MYLK3Q32MK0 819 aa22.96■■□□□ 1.27
CCDC9-204ENST00000599398 INO80DQ53TQ3 878 aaPredicted RBP22.96■■□□□ 1.27
CCDC9-204ENST00000599398 NEK5Q6P3R8 708 aa22.96■■□□□ 1.27
CCDC9-204ENST00000599398 KLK6Q92876 244 aa22.96■■□□□ 1.27
CCDC9-204ENST00000599398 DNAJC7Q99615 494 aa22.96■■□□□ 1.27
CCDC9-204ENST00000599398 LRRC19Q9H756 370 aa22.96■■□□□ 1.27
CCDC9-204ENST00000599398 UBA2Q9UBT2 640 aaPredicted RBP22.96■■□□□ 1.27
CCDC9-204ENST00000599398 DMTF1Q9Y222 760 aa22.96■■□□□ 1.27
CCDC9-204ENST00000599398 A0A1W2PR77 199 aa22.95■■□□□ 1.26
CCDC9-204ENST00000599398 IGSF6O95976 241 aa22.95■■□□□ 1.26
CCDC9-204ENST00000599398 UGT2B4P06133 528 aa22.95■■□□□ 1.26
CCDC9-204ENST00000599398 ADRB3P13945 408 aa22.95■■□□□ 1.26
CCDC9-204ENST00000599398 TCF4P15884 667 aa22.95■■□□□ 1.26
CCDC9-204ENST00000599398 PRLRP16471 622 aa22.95■■□□□ 1.26
CCDC9-204ENST00000599398 PMLP29590 882 aa22.95■■□□□ 1.26
CCDC9-204ENST00000599398 SSR1P43307 286 aaKnown RBP22.95■■□□□ 1.26
CCDC9-204ENST00000599398 ZNF135P52742 658 aaPredicted RBP22.95■■□□□ 1.26
CCDC9-204ENST00000599398 RAD51Q06609 339 aa22.95■■□□□ 1.26
CCDC9-204ENST00000599398 HNRNPDQ14103 355 aaKnown RBP22.95■■□□□ 1.26
CCDC9-204ENST00000599398 STAT4Q14765 748 aa22.95■■□□□ 1.26
CCDC9-204ENST00000599398 BOLA3Q53S33 107 aa22.95■■□□□ 1.26
CCDC9-204ENST00000599398 PARS2Q7L3T8 475 aaKnown RBP22.95■■□□□ 1.26
CCDC9-204ENST00000599398 HORMAD1Q86X24 394 aa22.95■■□□□ 1.26
CCDC9-204ENST00000599398 LRIG1Q96JA1 1093 aa22.95■■□□□ 1.26
CCDC9-204ENST00000599398 SLC39A8Q9C0K1 460 aa22.95■■□□□ 1.26
CCDC9-204ENST00000599398 CWC15Q9P013 229 aaKnown RBP22.95■■□□□ 1.26
CCDC9-204ENST00000599398 H3BRJ5 948 aa22.94■■□□□ 1.26
CCDC9-204ENST00000599398 MYO1FO00160 1098 aa22.94■■□□□ 1.26
CCDC9-204ENST00000599398 DFFAO00273 331 aa22.94■■□□□ 1.26
CCDC9-204ENST00000599398 SLC31A1O15431 190 aa22.94■■□□□ 1.26
CCDC9-204ENST00000599398 ARL4AP40617 200 aa22.94■■□□□ 1.26
CCDC9-204ENST00000599398 CCT8P50990 548 aa22.94■■□□□ 1.26
CCDC9-204ENST00000599398 PAPOLAP51003 745 aaKnown RBP22.94■■□□□ 1.26
CCDC9-204ENST00000599398 FAM193AP78312 1265 aa22.94■■□□□ 1.26
CCDC9-204ENST00000599398 IL9RQ01113 521 aa22.94■■□□□ 1.26
CCDC9-204ENST00000599398 FOXC1Q12948 553 aa22.94■■□□□ 1.26
CCDC9-204ENST00000599398 SUZ12Q15022 739 aaKnown RBP22.94■■□□□ 1.26
CCDC9-204ENST00000599398 ZNF423Q2M1K9 1284 aa22.94■■□□□ 1.26
CCDC9-204ENST00000599398 ZNF805Q5CZA5 627 aa22.94■■□□□ 1.26
CCDC9-204ENST00000599398 PRAMEF14Q5SWL7 426 aa22.94■■□□□ 1.26
CCDC9-204ENST00000599398 ZNF564Q8TBZ8 553 aaPredicted RBP22.94■■□□□ 1.26
CCDC9-204ENST00000599398 MYOCQ99972 504 aa22.94■■□□□ 1.26
CCDC9-204ENST00000599398 OSBPL1AQ9BXW6 950 aa22.94■■□□□ 1.26
CCDC9-204ENST00000599398 GDF3Q9NR23 364 aa22.94■■□□□ 1.26
CCDC9-204ENST00000599398 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.94■■□□□ 1.26
CCDC9-204ENST00000599398 CTTNBP2NLQ9P2B4 639 aa22.94■■□□□ 1.26
CCDC9-204ENST00000599398 ANGPTL2Q9UKU9 493 aa22.94■■□□□ 1.26
CCDC9-204ENST00000599398 PCDHGB2Q9Y5G2 931 aa22.94■■□□□ 1.26
CCDC9-204ENST00000599398 C16orf96A6NNT2 1141 aa22.93■■□□□ 1.26
CCDC9-204ENST00000599398 PRAMEF26H0Y7S4 382 aa22.93■■□□□ 1.26
CCDC9-204ENST00000599398 J3KR12 359 aa22.93■■□□□ 1.26
CCDC9-204ENST00000599398 TLR4O00206 839 aa22.93■■□□□ 1.26
CCDC9-204ENST00000599398 AKR1B10O60218 316 aa22.93■■□□□ 1.26
CCDC9-204ENST00000599398 DFNA5O60443 496 aa22.93■■□□□ 1.26
CCDC9-204ENST00000599398 HCAR3P49019 387 aa22.93■■□□□ 1.26
CCDC9-204ENST00000599398 ADKP55263 362 aaKnown RBP22.93■■□□□ 1.26
CCDC9-204ENST00000599398 TRIP6Q15654 476 aaKnown RBP22.93■■□□□ 1.26
CCDC9-204ENST00000599398 DPYSL2Q16555 572 aa22.93■■□□□ 1.26
CCDC9-204ENST00000599398 SLC18A3Q16572 532 aa22.93■■□□□ 1.26
CCDC9-204ENST00000599398 NIPA2Q8N8Q9 360 aa22.93■■□□□ 1.26
CCDC9-204ENST00000599398 MFSD2AQ8NA29 543 aa22.93■■□□□ 1.26
CCDC9-204ENST00000599398 CTNNBL1Q8WYA6 563 aaPredicted RBP22.93■■□□□ 1.26
CCDC9-204ENST00000599398 EXOC2Q96KP1 924 aa22.93■■□□□ 1.26
CCDC9-204ENST00000599398 KLHL32Q96NJ5 620 aa22.93■■□□□ 1.26
CCDC9-204ENST00000599398 ABHD10Q9NUJ1 306 aa22.93■■□□□ 1.26
CCDC9-204ENST00000599398 NENFQ9UMX5 172 aa22.93■■□□□ 1.26
CCDC9-204ENST00000599398 CA5BQ9Y2D0 317 aa22.93■■□□□ 1.26
CCDC9-204ENST00000599398 NEMP1O14524 444 aa22.92■■□□□ 1.26
CCDC9-204ENST00000599398 FLRT2O43155 660 aa22.92■■□□□ 1.26
CCDC9-204ENST00000599398 PRAMEF11O60813 436 aa22.92■■□□□ 1.26
CCDC9-204ENST00000599398 MFAP3LO75121 409 aa22.92■■□□□ 1.26
CCDC9-204ENST00000599398 RARAP10276 462 aa22.92■■□□□ 1.26
CCDC9-204ENST00000599398 MAPK8IP2Q13387 824 aaPredicted RBP22.92■■□□□ 1.26
CCDC9-204ENST00000599398 DPYSQ14117 519 aa22.92■■□□□ 1.26
CCDC9-204ENST00000599398 CYTH1Q15438 398 aa22.92■■□□□ 1.26
CCDC9-204ENST00000599398 ZNF284Q2VY69 593 aa22.92■■□□□ 1.26
CCDC9-204ENST00000599398 SEL1L3Q68CR1 1132 aa22.92■■□□□ 1.26
CCDC9-204ENST00000599398 GDPD4Q6W3E5 623 aa22.92■■□□□ 1.26
CCDC9-204ENST00000599398 NPWQ8N729 165 aa22.92■■□□□ 1.26
CCDC9-204ENST00000599398 RHBDD1Q8TEB9 315 aa22.92■■□□□ 1.26
CCDC9-204ENST00000599398 FEM1CQ96JP0 617 aa22.92■■□□□ 1.26
CCDC9-204ENST00000599398 ELF4Q99607 663 aaPredicted RBP22.92■■□□□ 1.26
CCDC9-204ENST00000599398 PACSIN1Q9BY11 444 aa22.92■■□□□ 1.26
CCDC9-204ENST00000599398 SP110Q9HB58 689 aa22.92■■□□□ 1.26
CCDC9-204ENST00000599398 PDFQ9HBH1 243 aa22.92■■□□□ 1.26
CCDC9-204ENST00000599398 FZD3Q9NPG1 666 aa22.92■■□□□ 1.26
CCDC9-204ENST00000599398 LHX3Q9UBR4 397 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms