RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 TMEM59LQ9UK28 342 aa10.74□□□□□ -0.69
SMG9-207ENST00000598860 ADAMTS6Q9UKP5 1117 aa10.74□□□□□ -0.69
SMG9-207ENST00000598860 DUSP12Q9UNI6 340 aa10.74□□□□□ -0.69
SMG9-207ENST00000598860 TRIOO75962 3097 aa10.73□□□□□ -0.69
SMG9-207ENST00000598860 TMEM191CA6NGB0 347 aa10.73□□□□□ -0.69
SMG9-207ENST00000598860 C2CD4BA6NLJ0 364 aa10.73□□□□□ -0.69
SMG9-207ENST00000598860 YJEFN3A6XGL0 299 aa10.73□□□□□ -0.69
SMG9-207ENST00000598860 E7ENQ6 273 aa10.73□□□□□ -0.69
SMG9-207ENST00000598860 RNASE1P07998 156 aaKnown RBP10.73□□□□□ -0.69
SMG9-207ENST00000598860 MYL4P12829 197 aa10.73□□□□□ -0.69
SMG9-207ENST00000598860 PAMP19021 973 aa10.73□□□□□ -0.69
SMG9-207ENST00000598860 DDX6P26196 483 aaKnown RBP eCLIP10.73□□□□□ -0.69
SMG9-207ENST00000598860 MAN1A1P33908 653 aa10.73□□□□□ -0.69
SMG9-207ENST00000598860 SLC1A1P43005 524 aa10.73□□□□□ -0.69
SMG9-207ENST00000598860 PTPN9P43378 593 aa10.73□□□□□ -0.69
SMG9-207ENST00000598860 SLC5A9Q2M3M2 681 aa10.73□□□□□ -0.69
SMG9-207ENST00000598860 BSPRYQ5W0U4 402 aa10.73□□□□□ -0.69
SMG9-207ENST00000598860 C11orf63Q6NUN7 778 aa10.73□□□□□ -0.69
SMG9-207ENST00000598860 MSANTD2Q6P1R3 559 aa10.73□□□□□ -0.69
SMG9-207ENST00000598860 KLHDC10Q6PID8 442 aa10.73□□□□□ -0.69
SMG9-207ENST00000598860 PARM1Q6UWI2 310 aa10.73□□□□□ -0.69
SMG9-207ENST00000598860 BHLHA9Q7RTU4 235 aa10.73□□□□□ -0.69
SMG9-207ENST00000598860 REXO1L1PQ8IX06 675 aa10.73□□□□□ -0.69
SMG9-207ENST00000598860 NIPA2Q8N8Q9 360 aa10.73□□□□□ -0.69
SMG9-207ENST00000598860 TRIM58Q8NG06 486 aa10.73□□□□□ -0.69
SMG9-207ENST00000598860 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.73□□□□□ -0.69
SMG9-207ENST00000598860 CLEC4CQ8WTT0 213 aa10.73□□□□□ -0.69
SMG9-207ENST00000598860 RNF139Q8WU17 664 aa10.73□□□□□ -0.69
SMG9-207ENST00000598860 MRPS31Q92665 395 aaKnown RBP10.73□□□□□ -0.69
SMG9-207ENST00000598860 DIO2Q92813 273 aa10.73□□□□□ -0.69
SMG9-207ENST00000598860 PIWIL1Q96J94 861 aaKnown RBP10.73□□□□□ -0.69
SMG9-207ENST00000598860 CNPY3Q9BT09 278 aa10.73□□□□□ -0.69
SMG9-207ENST00000598860 DDX23Q9BUQ8 820 aaKnown RBP10.73□□□□□ -0.69
SMG9-207ENST00000598860 MFSD1Q9H3U5 465 aa10.73□□□□□ -0.69
SMG9-207ENST00000598860 LZTFL1Q9NQ48 299 aa10.73□□□□□ -0.69
SMG9-207ENST00000598860 MBNL3Q9NUK0 354 aaKnown RBP10.73□□□□□ -0.69
SMG9-207ENST00000598860 WNT16Q9UBV4 365 aa10.73□□□□□ -0.69
SMG9-207ENST00000598860 ADGRE2Q9UHX3 823 aa10.73□□□□□ -0.69
SMG9-207ENST00000598860 GUCA1BQ9UMX6 200 aa10.73□□□□□ -0.69
SMG9-207ENST00000598860 NUMBLQ9Y6R0 609 aa10.73□□□□□ -0.69
SMG9-207ENST00000598860 FAM170AA1A519 330 aa10.72□□□□□ -0.69
SMG9-207ENST00000598860 MACROD2A1Z1Q3 448 aa10.72□□□□□ -0.69
SMG9-207ENST00000598860 FGF10O15520 208 aaPredicted RBP10.72□□□□□ -0.69
SMG9-207ENST00000598860 NARSO43776 548 aaKnown RBP10.72□□□□□ -0.69
SMG9-207ENST00000598860 KIF5CO60282 957 aa10.72□□□□□ -0.69
SMG9-207ENST00000598860 RNF8O76064 485 aa10.72□□□□□ -0.69
SMG9-207ENST00000598860 F9P00740 461 aa10.72□□□□□ -0.69
SMG9-207ENST00000598860 PDGFBP01127 241 aaPredicted RBP10.72□□□□□ -0.69
SMG9-207ENST00000598860 TUBB4AP04350 444 aa10.72□□□□□ -0.69
SMG9-207ENST00000598860 NCAM1P13591 858 aa10.72□□□□□ -0.69
SMG9-207ENST00000598860 PDGFRAP16234 1089 aa10.72□□□□□ -0.69
SMG9-207ENST00000598860 CEBPBP17676 345 aa10.72□□□□□ -0.69
SMG9-207ENST00000598860 PSMA2P25787 234 aa10.72□□□□□ -0.69
SMG9-207ENST00000598860 GABRR2P28476 465 aa10.72□□□□□ -0.69
SMG9-207ENST00000598860 RFC1P35251 1148 aaPredicted RBP10.72□□□□□ -0.69
SMG9-207ENST00000598860 SEPT7Q16181 437 aaKnown RBP10.72□□□□□ -0.69
SMG9-207ENST00000598860 SLC25A52Q3SY17 297 aa10.72□□□□□ -0.69
SMG9-207ENST00000598860 ARHGAP15Q53QZ3 475 aa10.72□□□□□ -0.69
SMG9-207ENST00000598860 ZCCHC8Q6NZY4 707 aaKnown RBP10.72□□□□□ -0.69
SMG9-207ENST00000598860 UBE2R2Q712K3 238 aaPredicted RBP10.72□□□□□ -0.69
SMG9-207ENST00000598860 RSRC2Q7L4I2 434 aaKnown RBP10.72□□□□□ -0.69
SMG9-207ENST00000598860 STRADAQ7RTN6 431 aa10.72□□□□□ -0.69
SMG9-207ENST00000598860 SCD5Q86SK9 330 aa10.72□□□□□ -0.69
SMG9-207ENST00000598860 TMC8Q8IU68 726 aa10.72□□□□□ -0.69
SMG9-207ENST00000598860 DEFB106AQ8N104 65 aa10.72□□□□□ -0.69
SMG9-207ENST00000598860 ATL2Q8NHH9 583 aa10.72□□□□□ -0.69
SMG9-207ENST00000598860 JOSD2Q8TAC2 188 aa10.72□□□□□ -0.69
SMG9-207ENST00000598860 RXFP2Q8WXD0 754 aa10.72□□□□□ -0.69
SMG9-207ENST00000598860 FGF14Q92915 247 aa10.72□□□□□ -0.69
SMG9-207ENST00000598860 TCEAL4Q96EI5 215 aa10.72□□□□□ -0.69
SMG9-207ENST00000598860 PGAP3Q96FM1 320 aaPredicted RBP10.72□□□□□ -0.69
SMG9-207ENST00000598860 SERPINB11Q96P15 392 aa10.72□□□□□ -0.69
SMG9-207ENST00000598860 RPP25Q9BUL9 199 aaKnown RBP10.72□□□□□ -0.69
SMG9-207ENST00000598860 CDADC1Q9BWV3 514 aa10.72□□□□□ -0.69
SMG9-207ENST00000598860 KCNH6Q9H252 994 aa10.72□□□□□ -0.69
SMG9-207ENST00000598860 NMUR1Q9HB89 426 aa10.72□□□□□ -0.69
SMG9-207ENST00000598860 ZNF334Q9HCZ1 680 aaPredicted RBP10.72□□□□□ -0.69
SMG9-207ENST00000598860 TRMT1Q9NXH9 659 aaKnown RBP10.72□□□□□ -0.69
SMG9-207ENST00000598860 TFR2Q9UP52 801 aa10.72□□□□□ -0.69
SMG9-207ENST00000598860 PAXBP1Q9Y5B6 917 aa10.72□□□□□ -0.69
SMG9-207ENST00000598860 KIF26AQ9ULI4 1882 aaPredicted RBP10.72□□□□□ -0.69
SMG9-207ENST00000598860 TRBV23OR9-2A0A075B6M9 112 aa10.71□□□□□ -0.69
SMG9-207ENST00000598860 ZNF840PA6NDX5 716 aa10.71□□□□□ -0.69
SMG9-207ENST00000598860 KIF2AO00139 706 aaPredicted RBP10.71□□□□□ -0.69
SMG9-207ENST00000598860 BUB1O43683 1085 aa10.71□□□□□ -0.69
SMG9-207ENST00000598860 TLR5O60602 858 aa10.71□□□□□ -0.69
SMG9-207ENST00000598860 TADA3O75528 432 aa10.71□□□□□ -0.69
SMG9-207ENST00000598860 GRAP2O75791 330 aa10.71□□□□□ -0.69
SMG9-207ENST00000598860 PROSCO94903 275 aa10.71□□□□□ -0.69
SMG9-207ENST00000598860 RARGP13631 454 aa10.71□□□□□ -0.69
SMG9-207ENST00000598860 AVPR2P30518 371 aa10.71□□□□□ -0.69
SMG9-207ENST00000598860 CCR2P41597 374 aa10.71□□□□□ -0.69
SMG9-207ENST00000598860 SULT1E1P49888 294 aa10.71□□□□□ -0.69
SMG9-207ENST00000598860 IRAK1P51617 712 aa10.71□□□□□ -0.69
SMG9-207ENST00000598860 KPNA1P52294 538 aaPredicted RBP10.71□□□□□ -0.69
SMG9-207ENST00000598860 RNASE9P60153 205 aaKnown RBP10.71□□□□□ -0.69
SMG9-207ENST00000598860 RPL7AP62424 266 aaKnown RBP10.71□□□□□ -0.69
SMG9-207ENST00000598860 EGR3Q06889 387 aa10.71□□□□□ -0.69
SMG9-207ENST00000598860 MTA1Q13330 715 aa10.71□□□□□ -0.69
SMG9-207ENST00000598860 DCAF6Q58WW2 860 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms