RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 EBF2Q9HAK2 575 aa17■□□□□ 0.31
SSBP4-204ENST00000597724 TMEM9BQ9NQ34 198 aa17■□□□□ 0.31
SSBP4-204ENST00000597724 FSCN3Q9NQT6 498 aa17■□□□□ 0.31
SSBP4-204ENST00000597724 DYRK4Q9NR20 520 aa17■□□□□ 0.31
SSBP4-204ENST00000597724 PCDH15Q96QU1 1955 aa17■□□□□ 0.31
SSBP4-204ENST00000597724 ADAMTS9Q9P2N4 1935 aa17■□□□□ 0.31
SSBP4-204ENST00000597724 A0A1W2PPC4 97 aa16.99■□□□□ 0.31
SSBP4-204ENST00000597724 C4orf47A7E2U8 309 aa16.99■□□□□ 0.31
SSBP4-204ENST00000597724 KRIT1O00522 736 aa16.99■□□□□ 0.31
SSBP4-204ENST00000597724 TM4SF5O14894 197 aa16.99■□□□□ 0.31
SSBP4-204ENST00000597724 LATO43561 262 aa16.99■□□□□ 0.31
SSBP4-204ENST00000597724 KRT7P08729 469 aa16.99■□□□□ 0.31
SSBP4-204ENST00000597724 ITGB7P26010 798 aa16.99■□□□□ 0.31
SSBP4-204ENST00000597724 CDC25BP30305 580 aa16.99■□□□□ 0.31
SSBP4-204ENST00000597724 GKP32189 559 aa16.99■□□□□ 0.31
SSBP4-204ENST00000597724 GJC1P36383 396 aa16.99■□□□□ 0.31
SSBP4-204ENST00000597724 DPYSL3Q14195 570 aa16.99■□□□□ 0.31
SSBP4-204ENST00000597724 PDK2Q15119 407 aa16.99■□□□□ 0.31
SSBP4-204ENST00000597724 ARHGAP36Q6ZRI8 547 aa16.99■□□□□ 0.31
SSBP4-204ENST00000597724 ERN2Q76MJ5 926 aaKnown RBP16.99■□□□□ 0.31
SSBP4-204ENST00000597724 KCTD6Q8NC69 237 aa16.99■□□□□ 0.31
SSBP4-204ENST00000597724 OR6K2Q8NGY2 324 aa16.99■□□□□ 0.31
SSBP4-204ENST00000597724 GDAP1L1Q96MZ0 367 aa16.99■□□□□ 0.31
SSBP4-204ENST00000597724 TM9SF3Q9HD45 589 aa16.99■□□□□ 0.31
SSBP4-204ENST00000597724 LHX3Q9UBR4 397 aa16.99■□□□□ 0.31
SSBP4-204ENST00000597724 IPO11Q9UI26 975 aaKnown RBP16.99■□□□□ 0.31
SSBP4-204ENST00000597724 TPX2Q9ULW0 747 aaKnown RBP16.99■□□□□ 0.31
SSBP4-204ENST00000597724 PCDHA13Q9Y5I0 950 aa16.99■□□□□ 0.31
SSBP4-204ENST00000597724 EPN1Q9Y6I3 576 aaPredicted RBP16.99■□□□□ 0.31
SSBP4-204ENST00000597724 CACNA1AO00555 2505 aa16.99■□□□□ 0.31
SSBP4-204ENST00000597724 SOWAHDA6NJG2 315 aa16.98■□□□□ 0.31
SSBP4-204ENST00000597724 NDUFA10O95299 355 aa16.98■□□□□ 0.31
SSBP4-204ENST00000597724 IGSF6O95976 241 aa16.98■□□□□ 0.31
SSBP4-204ENST00000597724 SYPP08247 313 aa16.98■□□□□ 0.31
SSBP4-204ENST00000597724 AFF3P51826 1226 aaKnown RBP16.98■□□□□ 0.31
SSBP4-204ENST00000597724 HADHBP55084 474 aaKnown RBP16.98■□□□□ 0.31
SSBP4-204ENST00000597724 PPP2CBP62714 309 aa16.98■□□□□ 0.31
SSBP4-204ENST00000597724 PPP2CAP67775 309 aa16.98■□□□□ 0.31
SSBP4-204ENST00000597724 IL10RBQ08334 325 aa16.98■□□□□ 0.31
SSBP4-204ENST00000597724 SPA17Q15506 151 aa16.98■□□□□ 0.31
SSBP4-204ENST00000597724 MAP7D3Q8IWC1 876 aa16.98■□□□□ 0.31
SSBP4-204ENST00000597724 GTPBP2Q9BX10 602 aaKnown RBP16.98■□□□□ 0.31
SSBP4-204ENST00000597724 CALN1Q9BXU9 219 aa16.98■□□□□ 0.31
SSBP4-204ENST00000597724 PREBQ9HCU5 417 aa16.98■□□□□ 0.31
SSBP4-204ENST00000597724 IMPACTQ9P2X3 320 aa16.98■□□□□ 0.31
SSBP4-204ENST00000597724 KNL1Q8NG31 2342 aa16.97■□□□□ 0.31
SSBP4-204ENST00000597724 C16orf96A6NNT2 1141 aa16.97■□□□□ 0.31
SSBP4-204ENST00000597724 PALMO75781 387 aa16.97■□□□□ 0.31
SSBP4-204ENST00000597724 SERPINB6P35237 376 aa16.97■□□□□ 0.31
SSBP4-204ENST00000597724 MAPK8P45983 427 aa16.97■□□□□ 0.31
SSBP4-204ENST00000597724 CSNK1EP49674 416 aaKnown RBP16.97■□□□□ 0.31
SSBP4-204ENST00000597724 NEK3P51956 506 aa16.97■□□□□ 0.31
SSBP4-204ENST00000597724 ATXN3P54252 364 aaPredicted RBP16.97■□□□□ 0.31
SSBP4-204ENST00000597724 RAD51Q06609 339 aa16.97■□□□□ 0.31
SSBP4-204ENST00000597724 ANKRD20A8PQ5CZ79 823 aa16.97■□□□□ 0.31
SSBP4-204ENST00000597724 ZNF805Q5CZA5 627 aa16.97■□□□□ 0.31
SSBP4-204ENST00000597724 NEK5Q6P3R8 708 aa16.97■□□□□ 0.31
SSBP4-204ENST00000597724 GDPD4Q6W3E5 623 aa16.97■□□□□ 0.31
SSBP4-204ENST00000597724 TRIM69Q86WT6 500 aa16.97■□□□□ 0.31
SSBP4-204ENST00000597724 PCDH19Q8TAB3 1148 aa16.97■□□□□ 0.31
SSBP4-204ENST00000597724 KLHL32Q96NJ5 620 aa16.97■□□□□ 0.31
SSBP4-204ENST00000597724 ZNF599Q96NL3 588 aa16.97■□□□□ 0.31
SSBP4-204ENST00000597724 ZNF670Q9BS34 389 aa16.97■□□□□ 0.31
SSBP4-204ENST00000597724 OSBPL1AQ9BXW6 950 aa16.97■□□□□ 0.31
SSBP4-204ENST00000597724 CPEB1Q9BZB8 566 aaKnown RBP16.97■□□□□ 0.31
SSBP4-204ENST00000597724 ZDHHC5Q9C0B5 715 aa16.97■□□□□ 0.31
SSBP4-204ENST00000597724 SP110Q9HB58 689 aa16.97■□□□□ 0.31
SSBP4-204ENST00000597724 LUC7LQ9NQ29 371 aaKnown RBP16.97■□□□□ 0.31
SSBP4-204ENST00000597724 PLXNA2O75051 1894 aa16.97■□□□□ 0.31
SSBP4-204ENST00000597724 A0A1B0GVT2 93 aa16.96■□□□□ 0.31
SSBP4-204ENST00000597724 DCDC2BA2VCK2 349 aa16.96■□□□□ 0.31
SSBP4-204ENST00000597724 UGT2B4P06133 528 aa16.96■□□□□ 0.31
SSBP4-204ENST00000597724 ADRB3P13945 408 aa16.96■□□□□ 0.31
SSBP4-204ENST00000597724 KDELR1P24390 212 aa16.96■□□□□ 0.31
SSBP4-204ENST00000597724 SLC1A1P43005 524 aa16.96■□□□□ 0.31
SSBP4-204ENST00000597724 GRIA4P48058 902 aa16.96■□□□□ 0.31
SSBP4-204ENST00000597724 RACK1P63244 317 aaKnown RBP16.96■□□□□ 0.31
SSBP4-204ENST00000597724 BNC1Q01954 994 aa16.96■□□□□ 0.31
SSBP4-204ENST00000597724 GRIK2Q13002 908 aa16.96■□□□□ 0.31
SSBP4-204ENST00000597724 RFTN1Q14699 578 aaPredicted RBP16.96■□□□□ 0.31
SSBP4-204ENST00000597724 LRRC38Q5VT99 294 aa16.96■□□□□ 0.31
SSBP4-204ENST00000597724 FBXL19Q6PCT2 694 aa16.96■□□□□ 0.31
SSBP4-204ENST00000597724 PARS2Q7L3T8 475 aaKnown RBP16.96■□□□□ 0.31
SSBP4-204ENST00000597724 PRPF39Q86UA1 669 aaKnown RBP16.96■□□□□ 0.31
SSBP4-204ENST00000597724 MINDY1Q8N5J2 469 aa16.96■□□□□ 0.31
SSBP4-204ENST00000597724 TSEN2Q8NCE0 465 aaKnown RBP16.96■□□□□ 0.31
SSBP4-204ENST00000597724 OR2I1PQ8NGU4 316 aa16.96■□□□□ 0.31
SSBP4-204ENST00000597724 RAPGEF5Q92565 580 aa16.96■□□□□ 0.31
SSBP4-204ENST00000597724 FAF2Q96CS3 445 aa16.96■□□□□ 0.31
SSBP4-204ENST00000597724 EXOC2Q96KP1 924 aa16.96■□□□□ 0.31
SSBP4-204ENST00000597724 KLHL11Q9NVR0 708 aa16.96■□□□□ 0.31
SSBP4-204ENST00000597724 TFR2Q9UP52 801 aa16.96■□□□□ 0.31
SSBP4-204ENST00000597724 A0A0A6YYK5 440 aaPredicted RBP16.95■□□□□ 0.3
SSBP4-204ENST00000597724 INSIG1O15503 277 aa16.95■□□□□ 0.3
SSBP4-204ENST00000597724 AP1G1O43747 822 aa16.95■□□□□ 0.3
SSBP4-204ENST00000597724 MAFKO60675 156 aa16.95■□□□□ 0.3
SSBP4-204ENST00000597724 RNGTTO60942 597 aaKnown RBP16.95■□□□□ 0.3
SSBP4-204ENST00000597724 PEX11BO96011 259 aa16.95■□□□□ 0.3
SSBP4-204ENST00000597724 MAT2AP31153 395 aaKnown RBP16.95■□□□□ 0.3
SSBP4-204ENST00000597724 NUDT1P36639 197 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms