RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.57□□□□□ -0.08
LIG1-208ENST00000595758 BZW1Q7L1Q6 419 aaKnown RBP14.57□□□□□ -0.08
LIG1-208ENST00000595758 BBS5Q8N3I7 341 aa14.57□□□□□ -0.08
LIG1-208ENST00000595758 TSEN2Q8NCE0 465 aaKnown RBP14.57□□□□□ -0.08
LIG1-208ENST00000595758 LRIG1Q96JA1 1093 aa14.57□□□□□ -0.08
LIG1-208ENST00000595758 EXOC2Q96KP1 924 aa14.57□□□□□ -0.08
LIG1-208ENST00000595758 PSKH2Q96QS6 385 aa14.57□□□□□ -0.08
LIG1-208ENST00000595758 GPR174Q9BXC1 333 aa14.57□□□□□ -0.08
LIG1-208ENST00000595758 OSBPL8Q9BZF1 889 aa14.57□□□□□ -0.08
LIG1-208ENST00000595758 NEUROG2Q9H2A3 272 aa14.57□□□□□ -0.08
LIG1-208ENST00000595758 SGK2Q9HBY8 427 aa14.57□□□□□ -0.08
LIG1-208ENST00000595758 SERGEFQ9UGK8 458 aa14.57□□□□□ -0.08
LIG1-208ENST00000595758 EVLQ9UI08 416 aaPredicted RBP14.57□□□□□ -0.08
LIG1-208ENST00000595758 EFR3BQ9Y2G0 817 aa14.57□□□□□ -0.08
LIG1-208ENST00000595758 ABCA7Q8IZY2 2146 aa14.57□□□□□ -0.08
LIG1-208ENST00000595758 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.56□□□□□ -0.08
LIG1-208ENST00000595758 PLK4O00444 970 aa14.56□□□□□ -0.08
LIG1-208ENST00000595758 MATN3O15232 486 aa14.56□□□□□ -0.08
LIG1-208ENST00000595758 ACSL1P33121 698 aa14.56□□□□□ -0.08
LIG1-208ENST00000595758 DRD3P35462 400 aa14.56□□□□□ -0.08
LIG1-208ENST00000595758 HSPA9P38646 679 aaKnown RBP14.56□□□□□ -0.08
LIG1-208ENST00000595758 MMP13P45452 471 aa14.56□□□□□ -0.08
LIG1-208ENST00000595758 CSNK1DP48730 415 aa14.56□□□□□ -0.08
LIG1-208ENST00000595758 PPIDQ08752 370 aaKnown RBP14.56□□□□□ -0.08
LIG1-208ENST00000595758 NSUN2Q08J23 767 aaKnown RBP eCLIP14.56□□□□□ -0.08
LIG1-208ENST00000595758 CCDC15Q0P6D6 951 aa14.56□□□□□ -0.08
LIG1-208ENST00000595758 CNTN1Q12860 1018 aa14.56□□□□□ -0.08
LIG1-208ENST00000595758 ZNF211Q13398 564 aaPredicted RBP14.56□□□□□ -0.08
LIG1-208ENST00000595758 HNRNPDQ14103 355 aaKnown RBP14.56□□□□□ -0.08
LIG1-208ENST00000595758 RPS6KA1Q15418 735 aa14.56□□□□□ -0.08
LIG1-208ENST00000595758 SPDYCQ5MJ68 293 aa14.56□□□□□ -0.08
LIG1-208ENST00000595758 CCDC181Q5TID7 509 aa14.56□□□□□ -0.08
LIG1-208ENST00000595758 PMS2CLQ68D20 193 aa14.56□□□□□ -0.08
LIG1-208ENST00000595758 LAIR1Q6GTX8 287 aa14.56□□□□□ -0.08
LIG1-208ENST00000595758 BBS12Q6ZW61 710 aa14.56□□□□□ -0.08
LIG1-208ENST00000595758 SRLQ86TD4 932 aa14.56□□□□□ -0.08
LIG1-208ENST00000595758 REXO1L1PQ8IX06 675 aa14.56□□□□□ -0.08
LIG1-208ENST00000595758 CCDC13Q8IYE1 715 aa14.56□□□□□ -0.08
LIG1-208ENST00000595758 TMEFF1Q8IYR6 380 aa14.56□□□□□ -0.08
LIG1-208ENST00000595758 DEFB119Q8N690 84 aa14.56□□□□□ -0.08
LIG1-208ENST00000595758 TRIM58Q8NG06 486 aa14.56□□□□□ -0.08
LIG1-208ENST00000595758 LRRN4Q8WUT4 740 aa14.56□□□□□ -0.08
LIG1-208ENST00000595758 MAML1Q92585 1016 aa14.56□□□□□ -0.08
LIG1-208ENST00000595758 P3H4Q92791 437 aa14.56□□□□□ -0.08
LIG1-208ENST00000595758 FATE1Q969F0 183 aa14.56□□□□□ -0.08
LIG1-208ENST00000595758 ARRDC3Q96B67 414 aa14.56□□□□□ -0.08
LIG1-208ENST00000595758 HDAC11Q96DB2 347 aa14.56□□□□□ -0.08
LIG1-208ENST00000595758 PPP1R16AQ96I34 528 aa14.56□□□□□ -0.08
LIG1-208ENST00000595758 OLFM3Q96PB7 478 aa14.56□□□□□ -0.08
LIG1-208ENST00000595758 LGMNQ99538 433 aa14.56□□□□□ -0.08
LIG1-208ENST00000595758 OSBPL1AQ9BXW6 950 aa14.56□□□□□ -0.08
LIG1-208ENST00000595758 BTBD1Q9H0C5 482 aa14.56□□□□□ -0.08
LIG1-208ENST00000595758 BRD8Q9H0E9 1235 aa14.56□□□□□ -0.08
LIG1-208ENST00000595758 DYRK4Q9NR20 520 aa14.56□□□□□ -0.08
LIG1-208ENST00000595758 SAE1Q9UBE0 346 aaPredicted RBP14.56□□□□□ -0.08
LIG1-208ENST00000595758 FZD4Q9ULV1 537 aa14.56□□□□□ -0.08
LIG1-208ENST00000595758 RNF103O00237 685 aa14.55□□□□□ -0.08
LIG1-208ENST00000595758 PPP1R12AO14974 1030 aaPredicted RBP14.55□□□□□ -0.08
LIG1-208ENST00000595758 MUSKO15146 869 aa14.55□□□□□ -0.08
LIG1-208ENST00000595758 INSIG1O15503 277 aa14.55□□□□□ -0.08
LIG1-208ENST00000595758 SLC7A4O43246 635 aa14.55□□□□□ -0.08
LIG1-208ENST00000595758 TJP3O95049 919 aa14.55□□□□□ -0.08
LIG1-208ENST00000595758 SEMA4FO95754 770 aa14.55□□□□□ -0.08
LIG1-208ENST00000595758 UGT2B4P06133 528 aa14.55□□□□□ -0.08
LIG1-208ENST00000595758 PECAM1P16284 738 aaPredicted RBP14.55□□□□□ -0.08
LIG1-208ENST00000595758 ITGB7P26010 798 aa14.55□□□□□ -0.08
LIG1-208ENST00000595758 RGRP47804 291 aa14.55□□□□□ -0.08
LIG1-208ENST00000595758 DHPSP49366 369 aaPredicted RBP14.55□□□□□ -0.08
LIG1-208ENST00000595758 SCNN1BP51168 640 aa14.55□□□□□ -0.08
LIG1-208ENST00000595758 AP1B1Q10567 949 aa14.55□□□□□ -0.08
LIG1-208ENST00000595758 GRM3Q14832 879 aa14.55□□□□□ -0.08
LIG1-208ENST00000595758 MEI1Q5TIA1 1274 aa14.55□□□□□ -0.08
LIG1-208ENST00000595758 AADACL2Q6P093 401 aa14.55□□□□□ -0.08
LIG1-208ENST00000595758 GDPD4Q6W3E5 623 aa14.55□□□□□ -0.08
LIG1-208ENST00000595758 TEX26Q8N6G2 289 aa14.55□□□□□ -0.08
LIG1-208ENST00000595758 FAM122AQ96E09 287 aa14.55□□□□□ -0.08
LIG1-208ENST00000595758 LOXL4Q96JB6 756 aa14.55□□□□□ -0.08
LIG1-208ENST00000595758 HERPUD2Q9BSE4 406 aa14.55□□□□□ -0.08
LIG1-208ENST00000595758 HDAC8Q9BY41 377 aa14.55□□□□□ -0.08
LIG1-208ENST00000595758 CPEB1Q9BZB8 566 aaKnown RBP14.55□□□□□ -0.08
LIG1-208ENST00000595758 NT5MQ9NPB1 228 aa14.55□□□□□ -0.08
LIG1-208ENST00000595758 RBM22Q9NW64 420 aaKnown RBP eCLIP14.55□□□□□ -0.08
LIG1-208ENST00000595758 TRMT1Q9NXH9 659 aaKnown RBP14.55□□□□□ -0.08
LIG1-208ENST00000595758 SPAG17Q6Q759 2223 aa14.54□□□□□ -0.08
LIG1-208ENST00000595758 PRR23AA6NEV1 266 aa14.54□□□□□ -0.08
LIG1-208ENST00000595758 LRRC72A6NJI9 287 aa14.54□□□□□ -0.08
LIG1-208ENST00000595758 NEBLO76041 1014 aa14.54□□□□□ -0.08
LIG1-208ENST00000595758 JCHAINP01591 159 aa14.54□□□□□ -0.08
LIG1-208ENST00000595758 CCNB1P14635 433 aa14.54□□□□□ -0.08
LIG1-208ENST00000595758 PTGER3P43115 390 aa14.54□□□□□ -0.08
LIG1-208ENST00000595758 MAPK8P45983 427 aa14.54□□□□□ -0.08
LIG1-208ENST00000595758 ZNF33AQ06730 810 aa14.54□□□□□ -0.08
LIG1-208ENST00000595758 ZNF805Q5CZA5 627 aa14.54□□□□□ -0.08
LIG1-208ENST00000595758 DCAF12L1Q5VU92 463 aa14.54□□□□□ -0.08
LIG1-208ENST00000595758 ERN2Q76MJ5 926 aaKnown RBP14.54□□□□□ -0.08
LIG1-208ENST00000595758 ARMCX6Q7L4S7 300 aa14.54□□□□□ -0.08
LIG1-208ENST00000595758 ASCL5Q7RTU5 278 aa14.54□□□□□ -0.08
LIG1-208ENST00000595758 PGBD5Q8N414 524 aa14.54□□□□□ -0.08
LIG1-208ENST00000595758 CADM4Q8NFZ8 388 aa14.54□□□□□ -0.08
LIG1-208ENST00000595758 OR14C36Q8NHC7 312 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms