RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 HECAQ9UBI9 543 aaPredicted RBP11.17□□□□□ -0.62
SHKBP1-206ENST00000595523 FRYQ5TBA9 3013 aa11.16□□□□□ -0.62
SHKBP1-206ENST00000595523 TBC1D3DA0A087WVF3 549 aa11.16□□□□□ -0.62
SHKBP1-206ENST00000595523 TBC1D3IA0A087WXS9 549 aa11.16□□□□□ -0.62
SHKBP1-206ENST00000595523 TBC1D3EA0A087X179 549 aa11.16□□□□□ -0.62
SHKBP1-206ENST00000595523 TBC1D3KA0A087X1G2 549 aa11.16□□□□□ -0.62
SHKBP1-206ENST00000595523 A0A1B0GVT2 93 aa11.16□□□□□ -0.62
SHKBP1-206ENST00000595523 TBC1D3FA6NER0 549 aaPredicted RBP11.16□□□□□ -0.62
SHKBP1-206ENST00000595523 ARHGAP42A6NI28 874 aa11.16□□□□□ -0.62
SHKBP1-206ENST00000595523 TBC1D3LB9A6J9 549 aa11.16□□□□□ -0.62
SHKBP1-206ENST00000595523 H3BRJ5 948 aa11.16□□□□□ -0.62
SHKBP1-206ENST00000595523 SPINT1O43278 529 aa11.16□□□□□ -0.62
SHKBP1-206ENST00000595523 DAPK3O43293 454 aa11.16□□□□□ -0.62
SHKBP1-206ENST00000595523 WNT1P04628 370 aa11.16□□□□□ -0.62
SHKBP1-206ENST00000595523 TBC1D3HP0C7X1 549 aa11.16□□□□□ -0.62
SHKBP1-206ENST00000595523 ITGB7P26010 798 aa11.16□□□□□ -0.62
SHKBP1-206ENST00000595523 MAN1A1P33908 653 aa11.16□□□□□ -0.62
SHKBP1-206ENST00000595523 ARL4AP40617 200 aa11.16□□□□□ -0.62
SHKBP1-206ENST00000595523 CSNK1EP49674 416 aaKnown RBP11.16□□□□□ -0.62
SHKBP1-206ENST00000595523 CDH6P55285 790 aa11.16□□□□□ -0.62
SHKBP1-206ENST00000595523 RHOAP61586 193 aa11.16□□□□□ -0.62
SHKBP1-206ENST00000595523 SNRPD1P62314 119 aaKnown RBP11.16□□□□□ -0.62
SHKBP1-206ENST00000595523 DPYSL3Q14195 570 aa11.16□□□□□ -0.62
SHKBP1-206ENST00000595523 MYLK3Q32MK0 819 aa11.16□□□□□ -0.62
SHKBP1-206ENST00000595523 TBC1D3GQ6DHY5 549 aa11.16□□□□□ -0.62
SHKBP1-206ENST00000595523 TBC1D3CQ6IPX1 549 aa11.16□□□□□ -0.62
SHKBP1-206ENST00000595523 ERN2Q76MJ5 926 aaKnown RBP11.16□□□□□ -0.62
SHKBP1-206ENST00000595523 TRIM69Q86WT6 500 aa11.16□□□□□ -0.62
SHKBP1-206ENST00000595523 TBC1D3Q8IZP1 549 aaPredicted RBP11.16□□□□□ -0.62
SHKBP1-206ENST00000595523 CASKIN2Q8WXE0 1202 aa11.16□□□□□ -0.62
SHKBP1-206ENST00000595523 RFFLQ8WZ73 363 aa11.16□□□□□ -0.62
SHKBP1-206ENST00000595523 EXOC2Q96KP1 924 aa11.16□□□□□ -0.62
SHKBP1-206ENST00000595523 SLC6A18Q96N87 628 aa11.16□□□□□ -0.62
SHKBP1-206ENST00000595523 GTPBP2Q9BX10 602 aaKnown RBP11.16□□□□□ -0.62
SHKBP1-206ENST00000595523 KDM4CQ9H3R0 1056 aa11.16□□□□□ -0.62
SHKBP1-206ENST00000595523 KLHL11Q9NVR0 708 aa11.16□□□□□ -0.62
SHKBP1-206ENST00000595523 DONSONQ9NYP3 566 aa11.16□□□□□ -0.62
SHKBP1-206ENST00000595523 UBA2Q9UBT2 640 aaPredicted RBP11.16□□□□□ -0.62
SHKBP1-206ENST00000595523 TFR2Q9UP52 801 aa11.16□□□□□ -0.62
SHKBP1-206ENST00000595523 ACACBO00763 2458 aa11.16□□□□□ -0.62
SHKBP1-206ENST00000595523 GOLGA4Q13439 2230 aaKnown RBP11.15□□□□□ -0.62
SHKBP1-206ENST00000595523 A0A1W2PR77 199 aa11.15□□□□□ -0.62
SHKBP1-206ENST00000595523 TMEM110-MUSTN1A8MSY1 372 aa11.15□□□□□ -0.62
SHKBP1-206ENST00000595523 DFFAO00273 331 aa11.15□□□□□ -0.62
SHKBP1-206ENST00000595523 KRIT1O00522 736 aa11.15□□□□□ -0.62
SHKBP1-206ENST00000595523 INSIG1O15503 277 aa11.15□□□□□ -0.62
SHKBP1-206ENST00000595523 POP4O95707 220 aaKnown RBP11.15□□□□□ -0.62
SHKBP1-206ENST00000595523 PEX11BO96011 259 aa11.15□□□□□ -0.62
SHKBP1-206ENST00000595523 ADRB3P13945 408 aa11.15□□□□□ -0.62
SHKBP1-206ENST00000595523 MAT2AP31153 395 aaKnown RBP11.15□□□□□ -0.62
SHKBP1-206ENST00000595523 GJC1P36383 396 aa11.15□□□□□ -0.62
SHKBP1-206ENST00000595523 ABL2P42684 1182 aa11.15□□□□□ -0.62
SHKBP1-206ENST00000595523 SSR1P43307 286 aaKnown RBP11.15□□□□□ -0.62
SHKBP1-206ENST00000595523 RGRP47804 291 aa11.15□□□□□ -0.62
SHKBP1-206ENST00000595523 GRIA4P48058 902 aa11.15□□□□□ -0.62
SHKBP1-206ENST00000595523 AFF3P51826 1226 aaKnown RBP11.15□□□□□ -0.62
SHKBP1-206ENST00000595523 NEK3P51956 506 aa11.15□□□□□ -0.62
SHKBP1-206ENST00000595523 MESDQ14696 234 aa11.15□□□□□ -0.62
SHKBP1-206ENST00000595523 TCEAL1Q15170 157 aa11.15□□□□□ -0.62
SHKBP1-206ENST00000595523 HADHQ16836 314 aaKnown RBP11.15□□□□□ -0.62
SHKBP1-206ENST00000595523 KIF19Q2TAC6 998 aa11.15□□□□□ -0.62
SHKBP1-206ENST00000595523 TMCO3Q6UWJ1 677 aa11.15□□□□□ -0.62
SHKBP1-206ENST00000595523 ERMP1Q7Z2K6 904 aa11.15□□□□□ -0.62
SHKBP1-206ENST00000595523 RHOT2Q8IXI1 618 aa11.15□□□□□ -0.62
SHKBP1-206ENST00000595523 RYBPQ8N488 228 aaPredicted RBP11.15□□□□□ -0.62
SHKBP1-206ENST00000595523 PCDH19Q8TAB3 1148 aa11.15□□□□□ -0.62
SHKBP1-206ENST00000595523 LRIG1Q96JA1 1093 aa11.15□□□□□ -0.62
SHKBP1-206ENST00000595523 NSMCE3Q96MG7 304 aa11.15□□□□□ -0.62
SHKBP1-206ENST00000595523 GDAP1L1Q96MZ0 367 aa11.15□□□□□ -0.62
SHKBP1-206ENST00000595523 PANX2Q96RD6 677 aa11.15□□□□□ -0.62
SHKBP1-206ENST00000595523 IL21RQ9HBE5 538 aa11.15□□□□□ -0.62
SHKBP1-206ENST00000595523 PREBQ9HCU5 417 aa11.15□□□□□ -0.62
SHKBP1-206ENST00000595523 DNAAF2Q9NVR5 837 aaKnown RBP11.15□□□□□ -0.62
SHKBP1-206ENST00000595523 RCOR3Q9P2K3 495 aaPredicted RBP11.15□□□□□ -0.62
SHKBP1-206ENST00000595523 IPO11Q9UI26 975 aaKnown RBP11.15□□□□□ -0.62
SHKBP1-206ENST00000595523 GGT7Q9UJ14 662 aa11.15□□□□□ -0.62
SHKBP1-206ENST00000595523 INTUQ9ULD6 942 aa11.15□□□□□ -0.62
SHKBP1-206ENST00000595523 ZFR2Q9UPR6 939 aaKnown RBP11.15□□□□□ -0.62
SHKBP1-206ENST00000595523 LRP4O75096 1905 aa11.14□□□□□ -0.63
SHKBP1-206ENST00000595523 MED19A0JLT2 244 aaPredicted RBP11.14□□□□□ -0.63
SHKBP1-206ENST00000595523 SOWAHDA6NJG2 315 aa11.14□□□□□ -0.63
SHKBP1-206ENST00000595523 C16orf96A6NNT2 1141 aa11.14□□□□□ -0.63
SHKBP1-206ENST00000595523 MUSKO15146 869 aa11.14□□□□□ -0.63
SHKBP1-206ENST00000595523 MFSD11O43934 449 aa11.14□□□□□ -0.63
SHKBP1-206ENST00000595523 RNGTTO60942 597 aaKnown RBP11.14□□□□□ -0.63
SHKBP1-206ENST00000595523 IGSF6O95976 241 aa11.14□□□□□ -0.63
SHKBP1-206ENST00000595523 UGT2B4P06133 528 aa11.14□□□□□ -0.63
SHKBP1-206ENST00000595523 SYPP08247 313 aa11.14□□□□□ -0.63
SHKBP1-206ENST00000595523 CD59P13987 128 aa11.14□□□□□ -0.63
SHKBP1-206ENST00000595523 RACK1P63244 317 aaKnown RBP11.14□□□□□ -0.63
SHKBP1-206ENST00000595523 IL10RBQ08334 325 aa11.14□□□□□ -0.63
SHKBP1-206ENST00000595523 KRT81Q14533 505 aa11.14□□□□□ -0.63
SHKBP1-206ENST00000595523 ZNF284Q2VY69 593 aa11.14□□□□□ -0.63
SHKBP1-206ENST00000595523 UAP1L1Q3KQV9 507 aa11.14□□□□□ -0.63
SHKBP1-206ENST00000595523 TMEM259Q4ZIN3 620 aa11.14□□□□□ -0.63
SHKBP1-206ENST00000595523 ZNF805Q5CZA5 627 aa11.14□□□□□ -0.63
SHKBP1-206ENST00000595523 SEL1L3Q68CR1 1132 aa11.14□□□□□ -0.63
SHKBP1-206ENST00000595523 NCBP2-AS2Q69YL0 99 aa11.14□□□□□ -0.63
SHKBP1-206ENST00000595523 PIP4P1Q86T03 277 aa11.14□□□□□ -0.63
SHKBP1-206ENST00000595523 LZTR1Q8N653 840 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms