RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 MMEP08473 750 aa16.64■□□□□ 0.25
LIG1-205ENST00000593425 TGM2P21980 687 aa16.64■□□□□ 0.25
LIG1-205ENST00000593425 RABIFP47224 123 aa16.64■□□□□ 0.25
LIG1-205ENST00000593425 DUSP3P51452 185 aaPredicted RBP16.64■□□□□ 0.25
LIG1-205ENST00000593425 NOMO3P69849 1222 aa16.64■□□□□ 0.25
LIG1-205ENST00000593425 ATP11AP98196 1134 aa16.64■□□□□ 0.25
LIG1-205ENST00000593425 SLC20A2Q08357 652 aa16.64■□□□□ 0.25
LIG1-205ENST00000593425 CDKN3Q16667 212 aa16.64■□□□□ 0.25
LIG1-205ENST00000593425 KLHDC7AQ5VTJ3 777 aa16.64■□□□□ 0.25
LIG1-205ENST00000593425 ZCCHC8Q6NZY4 707 aaKnown RBP16.64■□□□□ 0.25
LIG1-205ENST00000593425 MLKLQ8NB16 471 aa16.64■□□□□ 0.25
LIG1-205ENST00000593425 LSM14AQ8ND56 463 aaKnown RBP16.64■□□□□ 0.25
LIG1-205ENST00000593425 MAPK15Q8TD08 544 aa16.64■□□□□ 0.25
LIG1-205ENST00000593425 CPA5Q8WXQ8 436 aa16.64■□□□□ 0.25
LIG1-205ENST00000593425 TUBGCP2Q9BSJ2 902 aa16.64■□□□□ 0.25
LIG1-205ENST00000593425 C1QTNF2Q9BXJ5 285 aa16.64■□□□□ 0.25
LIG1-205ENST00000593425 NAA15Q9BXJ9 866 aaKnown RBP16.64■□□□□ 0.25
LIG1-205ENST00000593425 USP29Q9HBJ7 922 aa16.64■□□□□ 0.25
LIG1-205ENST00000593425 ASCL3Q9NQ33 180 aa16.64■□□□□ 0.25
LIG1-205ENST00000593425 PPARGC1AQ9UBK2 798 aaKnown RBP16.64■□□□□ 0.25
LIG1-205ENST00000593425 GCN1Q92616 2671 aaKnown RBP16.64■□□□□ 0.25
LIG1-205ENST00000593425 C16orf96A6NNT2 1141 aa16.63■□□□□ 0.25
LIG1-205ENST00000593425 H3BM21 787 aa16.63■□□□□ 0.25
LIG1-205ENST00000593425 FPGTO14772 594 aa16.63■□□□□ 0.25
LIG1-205ENST00000593425 AQP9O43315 295 aa16.63■□□□□ 0.25
LIG1-205ENST00000593425 LZTS3O60299 673 aaPredicted RBP16.63■□□□□ 0.25
LIG1-205ENST00000593425 LSM8O95777 96 aaKnown RBP16.63■□□□□ 0.25
LIG1-205ENST00000593425 LSSP48449 732 aa16.63■□□□□ 0.25
LIG1-205ENST00000593425 EIF2B5Q13144 721 aaKnown RBP16.63■□□□□ 0.25
LIG1-205ENST00000593425 CDO1Q16878 200 aa16.63■□□□□ 0.25
LIG1-205ENST00000593425 ISXQ2M1V0 245 aa16.63■□□□□ 0.25
LIG1-205ENST00000593425 C15orf59Q2T9L4 293 aaPredicted RBP16.63■□□□□ 0.25
LIG1-205ENST00000593425 DEFB133Q30KQ1 61 aa16.63■□□□□ 0.25
LIG1-205ENST00000593425 MANEALQ5VSG8 457 aa16.63■□□□□ 0.25
LIG1-205ENST00000593425 NAA35Q5VZE5 725 aa16.63■□□□□ 0.25
LIG1-205ENST00000593425 GUSBP11Q6P575 273 aa16.63■□□□□ 0.25
LIG1-205ENST00000593425 FAM114A1Q8IWE2 563 aa16.63■□□□□ 0.25
LIG1-205ENST00000593425 RBFAQ8N0V3 343 aa16.63■□□□□ 0.25
LIG1-205ENST00000593425 ZNF843Q8N446 348 aa16.63■□□□□ 0.25
LIG1-205ENST00000593425 RYBPQ8N488 228 aaPredicted RBP16.63■□□□□ 0.25
LIG1-205ENST00000593425 EPS8L1Q8TE68 723 aa16.63■□□□□ 0.25
LIG1-205ENST00000593425 ARHGEF2Q92974 986 aaKnown RBP16.63■□□□□ 0.25
LIG1-205ENST00000593425 LENG8Q96PV6 779 aaPredicted RBP16.63■□□□□ 0.25
LIG1-205ENST00000593425 MAGEB5Q9BZ81 275 aa16.63■□□□□ 0.25
LIG1-205ENST00000593425 ABCG4Q9H172 646 aa16.63■□□□□ 0.25
LIG1-205ENST00000593425 POLR1BQ9H9Y6 1135 aa16.63■□□□□ 0.25
LIG1-205ENST00000593425 CPNE5Q9HCH3 593 aa16.63■□□□□ 0.25
LIG1-205ENST00000593425 TMEM51Q9NW97 253 aa16.63■□□□□ 0.25
LIG1-205ENST00000593425 NEU3Q9UQ49 428 aa16.63■□□□□ 0.25
LIG1-205ENST00000593425 CSNK1G3Q9Y6M4 447 aa16.63■□□□□ 0.25
LIG1-205ENST00000593425 A0A1W2PNU3 283 aaPredicted RBP16.62■□□□□ 0.25
LIG1-205ENST00000593425 CPED1A4D0V7 1026 aa16.62■□□□□ 0.25
LIG1-205ENST00000593425 F8VZ95 297 aa16.62■□□□□ 0.25
LIG1-205ENST00000593425 FAM72CH0Y354 149 aa16.62■□□□□ 0.25
LIG1-205ENST00000593425 CASC3O15234 703 aaKnown RBP16.62■□□□□ 0.25
LIG1-205ENST00000593425 TSPAN6O43657 245 aa16.62■□□□□ 0.25
LIG1-205ENST00000593425 UCHL3P15374 230 aa16.62■□□□□ 0.25
LIG1-205ENST00000593425 JUNDP17535 347 aa16.62■□□□□ 0.25
LIG1-205ENST00000593425 PFN3P60673 137 aa16.62■□□□□ 0.25
LIG1-205ENST00000593425 UBE2HP62256 183 aa16.62■□□□□ 0.25
LIG1-205ENST00000593425 DPCR1Q3MIW9 517 aa16.62■□□□□ 0.25
LIG1-205ENST00000593425 C3orf38Q5JPI3 329 aa16.62■□□□□ 0.25
LIG1-205ENST00000593425 FAM72AQ5TYM5 149 aa16.62■□□□□ 0.25
LIG1-205ENST00000593425 FAM72DQ6L9T8 149 aa16.62■□□□□ 0.25
LIG1-205ENST00000593425 CRTC1Q6UUV9 634 aa16.62■□□□□ 0.25
LIG1-205ENST00000593425 LEKR1Q6ZMV7 388 aa16.62■□□□□ 0.25
LIG1-205ENST00000593425 ARCQ7LC44 396 aa16.62■□□□□ 0.25
LIG1-205ENST00000593425 EFL1Q7Z2Z2 1120 aaKnown RBP16.62■□□□□ 0.25
LIG1-205ENST00000593425 NLRP14Q86W24 1093 aa16.62■□□□□ 0.25
LIG1-205ENST00000593425 FAM72BQ86X60 149 aa16.62■□□□□ 0.25
LIG1-205ENST00000593425 LSMEM2Q8N112 164 aa16.62■□□□□ 0.25
LIG1-205ENST00000593425 MSANTD4Q8NCY6 345 aa16.62■□□□□ 0.25
LIG1-205ENST00000593425 LMX1AQ8TE12 382 aa16.62■□□□□ 0.25
LIG1-205ENST00000593425 SLC20A1Q8WUM9 679 aa16.62■□□□□ 0.25
LIG1-205ENST00000593425 ISG20Q96AZ6 181 aaKnown RBP16.62■□□□□ 0.25
LIG1-205ENST00000593425 TCEAL2Q9H3H9 227 aaPredicted RBP16.62■□□□□ 0.25
LIG1-205ENST00000593425 EVA1BQ9NVM1 165 aa16.62■□□□□ 0.25
LIG1-205ENST00000593425 OR12D3Q9UGF7 316 aa16.62■□□□□ 0.25
LIG1-205ENST00000593425 IPO11Q9UI26 975 aaKnown RBP16.62■□□□□ 0.25
LIG1-205ENST00000593425 DNAI1Q9UI46 699 aa16.62■□□□□ 0.25
LIG1-205ENST00000593425 PNMA8BQ9ULN7 279 aaPredicted RBP16.62■□□□□ 0.25
LIG1-205ENST00000593425 SATB2Q9UPW6 733 aa16.62■□□□□ 0.25
LIG1-205ENST00000593425 GJB6O95452 261 aa16.61■□□□□ 0.25
LIG1-205ENST00000593425 UGT2B4P06133 528 aa16.61■□□□□ 0.25
LIG1-205ENST00000593425 PLA2G2AP14555 144 aa16.61■□□□□ 0.25
LIG1-205ENST00000593425 IGFALSP35858 605 aa16.61■□□□□ 0.25
LIG1-205ENST00000593425 ERVPABLB-1P60509 514 aa16.61■□□□□ 0.25
LIG1-205ENST00000593425 NRG1Q02297 640 aaPredicted RBP16.61■□□□□ 0.25
LIG1-205ENST00000593425 SGCGQ13326 291 aa16.61■□□□□ 0.25
LIG1-205ENST00000593425 ZNF805Q5CZA5 627 aa16.61■□□□□ 0.25
LIG1-205ENST00000593425 LRRC73Q5JTD7 316 aa16.61■□□□□ 0.25
LIG1-205ENST00000593425 PERM1Q5SV97 790 aa16.61■□□□□ 0.25
LIG1-205ENST00000593425 RWDD4Q6NW29 188 aaKnown RBP16.61■□□□□ 0.25
LIG1-205ENST00000593425 PHLDB2Q86SQ0 1253 aa16.61■□□□□ 0.25
LIG1-205ENST00000593425 ZSCAN30Q86W11 494 aa16.61■□□□□ 0.25
LIG1-205ENST00000593425 PLPP6Q8IY26 295 aa16.61■□□□□ 0.25
LIG1-205ENST00000593425 DENND6BQ8NEG7 585 aa16.61■□□□□ 0.25
LIG1-205ENST00000593425 OR2AP1Q8NGE2 309 aa16.61■□□□□ 0.25
LIG1-205ENST00000593425 KCNE4Q8WWG9 221 aa16.61■□□□□ 0.25
LIG1-205ENST00000593425 RAB7BQ96AH8 199 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 284 ms