RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 BROXQ5VW32 411 aa9.66□□□□□ -0.86
BRCA1-226ENST00000591534 FBXL22Q6P050 247 aa9.66□□□□□ -0.86
BRCA1-226ENST00000591534 LRRC31Q6UY01 552 aa9.66□□□□□ -0.86
BRCA1-226ENST00000591534 C11orf57Q6ZUT1 292 aaPredicted RBP9.66□□□□□ -0.86
BRCA1-226ENST00000591534 BTLAQ7Z6A9 289 aa9.66□□□□□ -0.86
BRCA1-226ENST00000591534 ZSCAN30Q86W11 494 aa9.66□□□□□ -0.86
BRCA1-226ENST00000591534 DCP2Q8IU60 420 aaKnown RBP9.66□□□□□ -0.86
BRCA1-226ENST00000591534 IRF2BP1Q8IU81 584 aa9.66□□□□□ -0.86
BRCA1-226ENST00000591534 ZDHHC17Q8IUH5 632 aa9.66□□□□□ -0.86
BRCA1-226ENST00000591534 ATP11CQ8NB49 1132 aa9.66□□□□□ -0.86
BRCA1-226ENST00000591534 FRS2Q8WU20 508 aa9.66□□□□□ -0.86
BRCA1-226ENST00000591534 MYEOVQ96EZ4 313 aa9.66□□□□□ -0.86
BRCA1-226ENST00000591534 PPP1R13BQ96KQ4 1090 aa9.66□□□□□ -0.86
BRCA1-226ENST00000591534 SLC2A13Q96QE2 648 aa9.66□□□□□ -0.86
BRCA1-226ENST00000591534 PRMT1Q99873 361 aaKnown RBP9.66□□□□□ -0.86
BRCA1-226ENST00000591534 ABCG4Q9H172 646 aa9.66□□□□□ -0.86
BRCA1-226ENST00000591534 RBSNQ9H1K0 784 aa9.66□□□□□ -0.86
BRCA1-226ENST00000591534 USP29Q9HBJ7 922 aa9.66□□□□□ -0.86
BRCA1-226ENST00000591534 KLHL11Q9NVR0 708 aa9.66□□□□□ -0.86
BRCA1-226ENST00000591534 NCKIPSDQ9NZQ3 722 aa9.66□□□□□ -0.86
BRCA1-226ENST00000591534 COX16Q9P0S2 106 aa9.66□□□□□ -0.86
BRCA1-226ENST00000591534 ARHGAP20Q9P2F6 1191 aa9.66□□□□□ -0.86
BRCA1-226ENST00000591534 XPO7Q9UIA9 1087 aaKnown RBP9.66□□□□□ -0.86
BRCA1-226ENST00000591534 FASNP49327 2511 aaKnown RBP9.66□□□□□ -0.86
BRCA1-226ENST00000591534 LOC400499M0QZD8 3231 aa9.66□□□□□ -0.86
BRCA1-226ENST00000591534 ACACAQ13085 2346 aa9.66□□□□□ -0.86
BRCA1-226ENST00000591534 TEX51A0A1B0GUA7 166 aa9.65□□□□□ -0.86
BRCA1-226ENST00000591534 LRRC10BA6NIK2 292 aa9.65□□□□□ -0.86
BRCA1-226ENST00000591534 C10orf142B7Z368 130 aa9.65□□□□□ -0.86
BRCA1-226ENST00000591534 KPNA3O00505 521 aaPredicted RBP9.65□□□□□ -0.86
BRCA1-226ENST00000591534 WNT9AO14904 365 aa9.65□□□□□ -0.86
BRCA1-226ENST00000591534 ATXN7O15265 892 aaPredicted RBP9.65□□□□□ -0.86
BRCA1-226ENST00000591534 BNIP3LO60238 219 aa9.65□□□□□ -0.86
BRCA1-226ENST00000591534 F9P00740 461 aa9.65□□□□□ -0.86
BRCA1-226ENST00000591534 THEGLP0DJG4 465 aa9.65□□□□□ -0.86
BRCA1-226ENST00000591534 KRT9P35527 623 aa9.65□□□□□ -0.86
BRCA1-226ENST00000591534 UBASH3AP57075 661 aa9.65□□□□□ -0.86
BRCA1-226ENST00000591534 PPP2CBP62714 309 aa9.65□□□□□ -0.86
BRCA1-226ENST00000591534 PPP2CAP67775 309 aa9.65□□□□□ -0.86
BRCA1-226ENST00000591534 NME3Q13232 169 aa9.65□□□□□ -0.86
BRCA1-226ENST00000591534 HSP90AA4PQ58FG1 418 aa9.65□□□□□ -0.86
BRCA1-226ENST00000591534 AGBL4Q5VU57 503 aa9.65□□□□□ -0.86
BRCA1-226ENST00000591534 GJB7Q6PEY0 223 aa9.65□□□□□ -0.86
BRCA1-226ENST00000591534 GBP6Q6ZN66 633 aa9.65□□□□□ -0.86
BRCA1-226ENST00000591534 GPR155Q7Z3F1 870 aa9.65□□□□□ -0.86
BRCA1-226ENST00000591534 SETD3Q86TU7 594 aaPredicted RBP9.65□□□□□ -0.86
BRCA1-226ENST00000591534 LUZP1Q86V48 1076 aa9.65□□□□□ -0.86
BRCA1-226ENST00000591534 SPATS2Q86XZ4 545 aaKnown RBP9.65□□□□□ -0.86
BRCA1-226ENST00000591534 DRC7Q8IY82 874 aa9.65□□□□□ -0.86
BRCA1-226ENST00000591534 DEFB106AQ8N104 65 aa9.65□□□□□ -0.86
BRCA1-226ENST00000591534 SH2D3CQ8N5H7 860 aa9.65□□□□□ -0.86
BRCA1-226ENST00000591534 DCBLD1Q8N8Z6 715 aa9.65□□□□□ -0.86
BRCA1-226ENST00000591534 TMIEQ8NEW7 156 aa9.65□□□□□ -0.86
BRCA1-226ENST00000591534 KREMEN1Q96MU8 473 aa9.65□□□□□ -0.86
BRCA1-226ENST00000591534 FCRL3Q96P31 734 aaPredicted RBP9.65□□□□□ -0.86
BRCA1-226ENST00000591534 DEPDC7Q96QD5 511 aa9.65□□□□□ -0.86
BRCA1-226ENST00000591534 DUSP23Q9BVJ7 150 aa9.65□□□□□ -0.86
BRCA1-226ENST00000591534 PRORYQ9H606 182 aa9.65□□□□□ -0.86
BRCA1-226ENST00000591534 WDCPQ9H6R7 721 aa9.65□□□□□ -0.86
BRCA1-226ENST00000591534 VANGL2Q9ULK5 521 aa9.65□□□□□ -0.86
BRCA1-226ENST00000591534 STAP1Q9ULZ2 295 aa9.65□□□□□ -0.86
BRCA1-226ENST00000591534 HS3ST2Q9Y278 367 aa9.65□□□□□ -0.86
BRCA1-226ENST00000591534 TBC1D30Q9Y2I9 924 aa9.65□□□□□ -0.86
BRCA1-226ENST00000591534 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.65□□□□□ -0.864e-6■■□□□ 13.9
BRCA1-226ENST00000591534 URB1O60287 2271 aaKnown RBP9.65□□□□□ -0.87
BRCA1-226ENST00000591534 COL5A1P20908 1838 aaPredicted RBP9.64□□□□□ -0.87
BRCA1-226ENST00000591534 APC2O95996 2303 aa9.64□□□□□ -0.87
BRCA1-226ENST00000591534 A0A1W2PQU0 124 aa9.64□□□□□ -0.87
BRCA1-226ENST00000591534 H3BM21 787 aa9.64□□□□□ -0.87
BRCA1-226ENST00000591534 CBX4O00257 560 aa9.64□□□□□ -0.87
BRCA1-226ENST00000591534 SLC31A1O15431 190 aa9.64□□□□□ -0.87
BRCA1-226ENST00000591534 SIGLEC6O43699 453 aa9.64□□□□□ -0.87
BRCA1-226ENST00000591534 BRINP1O60477 761 aa9.64□□□□□ -0.87
BRCA1-226ENST00000591534 PCDH8O95206 1070 aa9.64□□□□□ -0.87
BRCA1-226ENST00000591534 MT-CO3P00414 261 aa9.64□□□□□ -0.87
BRCA1-226ENST00000591534 PTMAP06454 111 aaKnown RBP9.64□□□□□ -0.87
BRCA1-226ENST00000591534 GP1BAP07359 652 aa9.64□□□□□ -0.87
BRCA1-226ENST00000591534 RHOCP08134 193 aa9.64□□□□□ -0.87
BRCA1-226ENST00000591534 VAV1P15498 845 aa9.64□□□□□ -0.87
BRCA1-226ENST00000591534 HNRNPA2B1P22626 353 aaKnown RBP9.64□□□□□ -0.87
BRCA1-226ENST00000591534 DGKAP23743 735 aa9.64□□□□□ -0.87
BRCA1-226ENST00000591534 GRNP28799 593 aaKnown RBP9.64□□□□□ -0.87
BRCA1-226ENST00000591534 CHRNA3P32297 505 aa9.64□□□□□ -0.87
BRCA1-226ENST00000591534 BPIFB4P59827 614 aa9.64□□□□□ -0.87
BRCA1-226ENST00000591534 INSM1Q01101 510 aaPredicted RBP9.64□□□□□ -0.87
BRCA1-226ENST00000591534 SLC20A2Q08357 652 aa9.64□□□□□ -0.87
BRCA1-226ENST00000591534 KCNMA1Q12791 1236 aa9.64□□□□□ -0.87
BRCA1-226ENST00000591534 EIF4EBP2Q13542 120 aaPredicted RBP9.64□□□□□ -0.87
BRCA1-226ENST00000591534 HIF1AQ16665 826 aa9.64□□□□□ -0.87
BRCA1-226ENST00000591534 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.64□□□□□ -0.87
BRCA1-226ENST00000591534 TBC1D25Q3MII6 688 aa9.64□□□□□ -0.87
BRCA1-226ENST00000591534 BRMS1LQ5PSV4 323 aa9.64□□□□□ -0.87
BRCA1-226ENST00000591534 OR6B2Q6IFH4 312 aa9.64□□□□□ -0.87
BRCA1-226ENST00000591534 CXorf57Q6NSI4 855 aaKnown RBP9.64□□□□□ -0.87
BRCA1-226ENST00000591534 RETSATQ6NUM9 610 aa9.64□□□□□ -0.87
BRCA1-226ENST00000591534 HORMAD1Q86X24 394 aa9.64□□□□□ -0.87
BRCA1-226ENST00000591534 CIR1Q86X95 450 aaPredicted RBP9.64□□□□□ -0.87
BRCA1-226ENST00000591534 GAS2L3Q86XJ1 694 aa9.64□□□□□ -0.87
BRCA1-226ENST00000591534 CREBRFQ8IUR6 639 aa9.64□□□□□ -0.87
BRCA1-226ENST00000591534 MSANTD4Q8NCY6 345 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms