RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 GIMD1P0DJR0 217 aa10.61□□□□□ -0.71
VPS4B-207ENST00000591519 HNRNPA2B1P22626 353 aaKnown RBP10.61□□□□□ -0.71
VPS4B-207ENST00000591519 GLDCP23378 1020 aa10.61□□□□□ -0.71
VPS4B-207ENST00000591519 RECQLP46063 649 aaPredicted RBP10.61□□□□□ -0.71
VPS4B-207ENST00000591519 KLK7P49862 253 aa10.61□□□□□ -0.71
VPS4B-207ENST00000591519 SERPINH1P50454 418 aaKnown RBP10.61□□□□□ -0.71
VPS4B-207ENST00000591519 COPB1P53618 953 aaKnown RBP10.61□□□□□ -0.71
VPS4B-207ENST00000591519 NOMO3P69849 1222 aa10.61□□□□□ -0.71
VPS4B-207ENST00000591519 GNA12Q03113 381 aa10.61□□□□□ -0.71
VPS4B-207ENST00000591519 NCAPHQ15003 741 aa10.61□□□□□ -0.71
VPS4B-207ENST00000591519 NFKBIBQ15653 356 aa10.61□□□□□ -0.71
VPS4B-207ENST00000591519 ZSCAN23Q3MJ62 389 aa10.61□□□□□ -0.71
VPS4B-207ENST00000591519 TMEM259Q4ZIN3 620 aa10.61□□□□□ -0.71
VPS4B-207ENST00000591519 HES3Q5TGS1 186 aa10.61□□□□□ -0.71
VPS4B-207ENST00000591519 C22orf39Q6P5X5 142 aa10.61□□□□□ -0.71
VPS4B-207ENST00000591519 LINGO4Q6UY18 593 aa10.61□□□□□ -0.71
VPS4B-207ENST00000591519 TFAP2DQ7Z6R9 452 aa10.61□□□□□ -0.71
VPS4B-207ENST00000591519 ZNF677Q86XU0 584 aa10.61□□□□□ -0.71
VPS4B-207ENST00000591519 PCDH20Q8N6Y1 951 aaKnown RBP10.61□□□□□ -0.71
VPS4B-207ENST00000591519 MSANTD4Q8NCY6 345 aa10.61□□□□□ -0.71
VPS4B-207ENST00000591519 ANKRD20A12PQ8NF67 263 aa10.61□□□□□ -0.71
VPS4B-207ENST00000591519 OR7D4Q8NG98 312 aa10.61□□□□□ -0.71
VPS4B-207ENST00000591519 OR4C6Q8NH72 309 aa10.61□□□□□ -0.71
VPS4B-207ENST00000591519 EPS8L1Q8TE68 723 aa10.61□□□□□ -0.71
VPS4B-207ENST00000591519 CPA5Q8WXQ8 436 aa10.61□□□□□ -0.71
VPS4B-207ENST00000591519 ISG20Q96AZ6 181 aaKnown RBP10.61□□□□□ -0.71
VPS4B-207ENST00000591519 NXPE2Q96DL1 559 aa10.61□□□□□ -0.71
VPS4B-207ENST00000591519 FEM1CQ96JP0 617 aa10.61□□□□□ -0.71
VPS4B-207ENST00000591519 BMFQ96LC9 184 aa10.61□□□□□ -0.71
VPS4B-207ENST00000591519 CFAP57Q96MR6 1250 aa10.61□□□□□ -0.71
VPS4B-207ENST00000591519 OSBPL2Q9H1P3 480 aa10.61□□□□□ -0.71
VPS4B-207ENST00000591519 DYRK4Q9NR20 520 aa10.61□□□□□ -0.71
VPS4B-207ENST00000591519 GPR27Q9NS67 375 aa10.61□□□□□ -0.71
VPS4B-207ENST00000591519 CA5BQ9Y2D0 317 aa10.61□□□□□ -0.71
VPS4B-207ENST00000591519 BAHCC1Q9P281 2608 aa10.61□□□□□ -0.71
VPS4B-207ENST00000591519 FASNP49327 2511 aaKnown RBP10.6□□□□□ -0.71
VPS4B-207ENST00000591519 TRPM6Q9BX84 2022 aa10.6□□□□□ -0.71
VPS4B-207ENST00000591519 CHD5Q8TDI0 1954 aa10.6□□□□□ -0.71
VPS4B-207ENST00000591519 SMTNL1A8MU46 457 aa10.6□□□□□ -0.71
VPS4B-207ENST00000591519 F8VZ95 297 aa10.6□□□□□ -0.71
VPS4B-207ENST00000591519 SIGLEC6O43699 453 aa10.6□□□□□ -0.71
VPS4B-207ENST00000591519 AP1G1O43747 822 aa10.6□□□□□ -0.71
VPS4B-207ENST00000591519 LEFTY1O75610 366 aa10.6□□□□□ -0.71
VPS4B-207ENST00000591519 CYP1A1P04798 512 aaPredicted RBP10.6□□□□□ -0.71
VPS4B-207ENST00000591519 MMEP08473 750 aa10.6□□□□□ -0.71
VPS4B-207ENST00000591519 ATP1A3P13637 1013 aa10.6□□□□□ -0.71
VPS4B-207ENST00000591519 MMP8P22894 467 aa10.6□□□□□ -0.71
VPS4B-207ENST00000591519 ITGB7P26010 798 aa10.6□□□□□ -0.71
VPS4B-207ENST00000591519 AKT2P31751 481 aa10.6□□□□□ -0.71
VPS4B-207ENST00000591519 L1CAMP32004 1257 aa10.6□□□□□ -0.71
VPS4B-207ENST00000591519 ADRA1BP35368 520 aa10.6□□□□□ -0.71
VPS4B-207ENST00000591519 ETFBP38117 255 aa10.6□□□□□ -0.71
VPS4B-207ENST00000591519 EIF2S3P41091 472 aaKnown RBP10.6□□□□□ -0.71
VPS4B-207ENST00000591519 ZNF165P49910 485 aa10.6□□□□□ -0.71
VPS4B-207ENST00000591519 RPS21P63220 83 aaKnown RBP10.6□□□□□ -0.71
VPS4B-207ENST00000591519 ARF5P84085 180 aa10.6□□□□□ -0.71
VPS4B-207ENST00000591519 INSM1Q01101 510 aaPredicted RBP10.6□□□□□ -0.71
VPS4B-207ENST00000591519 ACAP1Q15027 740 aa10.6□□□□□ -0.71
VPS4B-207ENST00000591519 SKOR2Q2VWA4 1001 aaPredicted RBP10.6□□□□□ -0.71
VPS4B-207ENST00000591519 C2CD6Q53TS8 623 aa10.6□□□□□ -0.71
VPS4B-207ENST00000591519 CARD16Q5EG05 197 aa10.6□□□□□ -0.71
VPS4B-207ENST00000591519 FKBP15Q5T1M5 1219 aa10.6□□□□□ -0.71
VPS4B-207ENST00000591519 MANEALQ5VSG8 457 aa10.6□□□□□ -0.71
VPS4B-207ENST00000591519 TAF3Q5VWG9 929 aa10.6□□□□□ -0.71
VPS4B-207ENST00000591519 NAA35Q5VZE5 725 aa10.6□□□□□ -0.71
VPS4B-207ENST00000591519 GCNT7Q6ZNI0 430 aa10.6□□□□□ -0.71
VPS4B-207ENST00000591519 ZSCAN30Q86W11 494 aa10.6□□□□□ -0.71
VPS4B-207ENST00000591519 DCBLD1Q8N8Z6 715 aa10.6□□□□□ -0.71
VPS4B-207ENST00000591519 FAM181AQ8N9Y4 354 aa10.6□□□□□ -0.71
VPS4B-207ENST00000591519 ASB12Q8WXK4 309 aa10.6□□□□□ -0.71
VPS4B-207ENST00000591519 CENPIQ92674 756 aaPredicted RBP10.6□□□□□ -0.71
VPS4B-207ENST00000591519 PPP1R16AQ96I34 528 aa10.6□□□□□ -0.71
VPS4B-207ENST00000591519 LRIG1Q96JA1 1093 aa10.6□□□□□ -0.71
VPS4B-207ENST00000591519 LENG8Q96PV6 779 aaPredicted RBP10.6□□□□□ -0.71
VPS4B-207ENST00000591519 HEPHQ9BQS7 1158 aa10.6□□□□□ -0.71
VPS4B-207ENST00000591519 FUCA2Q9BTY2 467 aa10.6□□□□□ -0.71
VPS4B-207ENST00000591519 SPON2Q9BUD6 331 aa10.6□□□□□ -0.71
VPS4B-207ENST00000591519 SLC17A9Q9BYT1 436 aa10.6□□□□□ -0.71
VPS4B-207ENST00000591519 TNKS2Q9H2K2 1166 aa10.6□□□□□ -0.71
VPS4B-207ENST00000591519 CBX8Q9HC52 389 aa10.6□□□□□ -0.71
VPS4B-207ENST00000591519 ATP13A1Q9HD20 1204 aa10.6□□□□□ -0.71
VPS4B-207ENST00000591519 OR12D3Q9UGF7 316 aa10.6□□□□□ -0.71
VPS4B-207ENST00000591519 NOCTQ9UK39 431 aaKnown RBP10.6□□□□□ -0.71
VPS4B-207ENST00000591519 FADS3Q9Y5Q0 445 aa10.6□□□□□ -0.71
VPS4B-207ENST00000591519 IGSF10Q6WRI0 2623 aa10.59□□□□□ -0.71
VPS4B-207ENST00000591519 NEMP2A6NFY4 417 aa10.59□□□□□ -0.71
VPS4B-207ENST00000591519 GOLGA8SH3BPF8 625 aa10.59□□□□□ -0.71
VPS4B-207ENST00000591519 SDC3O75056 442 aa10.59□□□□□ -0.71
VPS4B-207ENST00000591519 PIAS2O75928 621 aa10.59□□□□□ -0.71
VPS4B-207ENST00000591519 PCDH8O95206 1070 aa10.59□□□□□ -0.71
VPS4B-207ENST00000591519 PAK4O96013 591 aaPredicted RBP10.59□□□□□ -0.71
VPS4B-207ENST00000591519 CKMT1AP12532 417 aa10.59□□□□□ -0.71
VPS4B-207ENST00000591519 ADRB3P13945 408 aa10.59□□□□□ -0.71
VPS4B-207ENST00000591519 PRLRP16471 622 aa10.59□□□□□ -0.71
VPS4B-207ENST00000591519 CHRNB2P17787 502 aa10.59□□□□□ -0.71
VPS4B-207ENST00000591519 NEK3P51956 506 aa10.59□□□□□ -0.71
VPS4B-207ENST00000591519 CLDN6P56747 220 aa10.59□□□□□ -0.71
VPS4B-207ENST00000591519 CDR2Q01850 454 aa10.59□□□□□ -0.71
VPS4B-207ENST00000591519 UBXN1Q04323 297 aa10.59□□□□□ -0.71
VPS4B-207ENST00000591519 FGL2Q14314 439 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms