RNA–Protein interactions for RNA: ENST00000590315.5

DDX39A-213, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-213ENST00000590315 DMWDQ09019 674 aa13.05□□□□□ -0.32
DDX39A-213ENST00000590315 PRKD1Q15139 912 aaPredicted RBP13.05□□□□□ -0.32
DDX39A-213ENST00000590315 CST6Q15828 149 aa13.05□□□□□ -0.32
DDX39A-213ENST00000590315 ARSIQ5FYB1 569 aa13.05□□□□□ -0.32
DDX39A-213ENST00000590315 FAM182AQ5T1J6 154 aa13.05□□□□□ -0.32
DDX39A-213ENST00000590315 FAM46CQ5VWP2 391 aa13.05□□□□□ -0.32
DDX39A-213ENST00000590315 SRLQ86TD4 932 aa13.05□□□□□ -0.32
DDX39A-213ENST00000590315 OR2A12Q8NGT7 310 aa13.05□□□□□ -0.32
DDX39A-213ENST00000590315 C1orf54Q8WWF1 131 aa13.05□□□□□ -0.32
DDX39A-213ENST00000590315 SPACA7Q96KW9 195 aa13.05□□□□□ -0.32
DDX39A-213ENST00000590315 MRGPRX1Q96LB2 322 aa13.05□□□□□ -0.32
DDX39A-213ENST00000590315 NAP1L3Q99457 506 aaPredicted RBP13.05□□□□□ -0.32
DDX39A-213ENST00000590315 OMDQ99983 421 aa13.05□□□□□ -0.32
DDX39A-213ENST00000590315 MKRN2Q9H000 416 aaKnown RBP13.05□□□□□ -0.32
DDX39A-213ENST00000590315 SMARCAL1Q9NZC9 954 aa13.05□□□□□ -0.32
DDX39A-213ENST00000590315 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.05□□□□□ -0.32
DDX39A-213ENST00000590315 FBXO4Q9UKT5 387 aa13.05□□□□□ -0.32
DDX39A-213ENST00000590315 CYP8B1Q9UNU6 501 aa13.05□□□□□ -0.32
DDX39A-213ENST00000590315 INVSQ9Y283 1065 aa13.05□□□□□ -0.32
DDX39A-213ENST00000590315 SAR1BQ9Y6B6 198 aa13.05□□□□□ -0.32
DDX39A-213ENST00000590315 GOLGA6L10A0A0M3HER8 536 aa13.04□□□□□ -0.32
DDX39A-213ENST00000590315 TTC24A2A3L6 582 aaPredicted RBP13.04□□□□□ -0.32
DDX39A-213ENST00000590315 RNF103O00237 685 aa13.04□□□□□ -0.32
DDX39A-213ENST00000590315 ALOX15BO15296 676 aa13.04□□□□□ -0.32
DDX39A-213ENST00000590315 INSIG1O15503 277 aa13.04□□□□□ -0.32
DDX39A-213ENST00000590315 MTSS1O43312 755 aa13.04□□□□□ -0.32
DDX39A-213ENST00000590315 LEFTY1O75610 366 aa13.04□□□□□ -0.32
DDX39A-213ENST00000590315 RNASEH2AO75792 299 aaKnown RBP13.04□□□□□ -0.32
DDX39A-213ENST00000590315 PAPSS2O95340 614 aaPredicted RBP13.04□□□□□ -0.32
DDX39A-213ENST00000590315 PIGNO95427 931 aa13.04□□□□□ -0.32
DDX39A-213ENST00000590315 POP4O95707 220 aaKnown RBP13.04□□□□□ -0.32
DDX39A-213ENST00000590315 UGT2B4P06133 528 aa13.04□□□□□ -0.32
DDX39A-213ENST00000590315 SLC8A1P32418 973 aa13.04□□□□□ -0.32
DDX39A-213ENST00000590315 RGRP47804 291 aa13.04□□□□□ -0.32
DDX39A-213ENST00000590315 NRLP54845 237 aa13.04□□□□□ -0.32
DDX39A-213ENST00000590315 ETF1P62495 437 aaKnown RBP13.04□□□□□ -0.32
DDX39A-213ENST00000590315 ZBTB17Q13105 803 aa13.04□□□□□ -0.32
DDX39A-213ENST00000590315 KLF1Q13351 362 aaPredicted RBP13.04□□□□□ -0.32
DDX39A-213ENST00000590315 XRCC4Q13426 336 aa13.04□□□□□ -0.32
DDX39A-213ENST00000590315 HNRNPDQ14103 355 aaKnown RBP13.04□□□□□ -0.32
DDX39A-213ENST00000590315 MYLK3Q32MK0 819 aa13.04□□□□□ -0.32
DDX39A-213ENST00000590315 HDDC3Q8N4P3 179 aa13.04□□□□□ -0.32
DDX39A-213ENST00000590315 COG1Q8WTW3 980 aa13.04□□□□□ -0.32
DDX39A-213ENST00000590315 PDCD6IPQ8WUM4 868 aaKnown RBP13.04□□□□□ -0.32
DDX39A-213ENST00000590315 HTR3CQ8WXA8 447 aa13.04□□□□□ -0.32
DDX39A-213ENST00000590315 RLN3Q8WXF3 142 aa13.04□□□□□ -0.32
DDX39A-213ENST00000590315 MAML1Q92585 1016 aa13.04□□□□□ -0.32
DDX39A-213ENST00000590315 PPP1R16AQ96I34 528 aa13.04□□□□□ -0.32
DDX39A-213ENST00000590315 SEMA3CQ99985 751 aa13.04□□□□□ -0.32
DDX39A-213ENST00000590315 POLR1EQ9GZS1 481 aaKnown RBP13.04□□□□□ -0.32
DDX39A-213ENST00000590315 RSPH9Q9H1X1 276 aaPredicted RBP13.04□□□□□ -0.32
DDX39A-213ENST00000590315 DNPEPQ9ULA0 475 aa13.04□□□□□ -0.32
DDX39A-213ENST00000590315 ZNF148Q9UQR1 794 aa13.04□□□□□ -0.32
DDX39A-213ENST00000590315 NCKAP1Q9Y2A7 1128 aa13.04□□□□□ -0.32
DDX39A-213ENST00000590315 RALGAPA1Q6GYQ0 2036 aa13.04□□□□□ -0.32
DDX39A-213ENST00000590315 NUMA1Q14980 2115 aa13.03□□□□□ -0.32
DDX39A-213ENST00000590315 A0A1W2PP55 124 aa13.03□□□□□ -0.32
DDX39A-213ENST00000590315 H0Y858 1186 aa13.03□□□□□ -0.32
DDX39A-213ENST00000590315 PLK4O00444 970 aa13.03□□□□□ -0.32
DDX39A-213ENST00000590315 MUSKO15146 869 aa13.03□□□□□ -0.32
DDX39A-213ENST00000590315 MAP3K13O43283 966 aa13.03□□□□□ -0.32
DDX39A-213ENST00000590315 ZNF821O75541 412 aaPredicted RBP13.03□□□□□ -0.32
DDX39A-213ENST00000590315 GJB3O75712 270 aa13.03□□□□□ -0.32
DDX39A-213ENST00000590315 PEX11BO96011 259 aa13.03□□□□□ -0.32
DDX39A-213ENST00000590315 CTSLP07711 333 aa13.03□□□□□ -0.32
DDX39A-213ENST00000590315 SP9P0CG40 484 aa13.03□□□□□ -0.32
DDX39A-213ENST00000590315 XPAP23025 273 aaPredicted RBP13.03□□□□□ -0.32
DDX39A-213ENST00000590315 PTPN3P26045 913 aa13.03□□□□□ -0.32
DDX39A-213ENST00000590315 SERPINA4P29622 427 aa13.03□□□□□ -0.32
DDX39A-213ENST00000590315 DEKP35659 375 aaKnown RBP13.03□□□□□ -0.32
DDX39A-213ENST00000590315 PAFAH1B1P43034 410 aa13.03□□□□□ -0.32
DDX39A-213ENST00000590315 IFI35P80217 286 aaPredicted RBP13.03□□□□□ -0.32
DDX39A-213ENST00000590315 DSC2Q02487 901 aa13.03□□□□□ -0.32
DDX39A-213ENST00000590315 ZNF33AQ06730 810 aa13.03□□□□□ -0.32
DDX39A-213ENST00000590315 BCL2L1Q07817 233 aa13.03□□□□□ -0.32
DDX39A-213ENST00000590315 SFSWAPQ12872 951 aaKnown RBP13.03□□□□□ -0.32
DDX39A-213ENST00000590315 USP39Q53GS9 565 aaKnown RBP13.03□□□□□ -0.32
DDX39A-213ENST00000590315 CEP68Q76N32 757 aa13.03□□□□□ -0.32
DDX39A-213ENST00000590315 GSTA5Q7RTV2 222 aa13.03□□□□□ -0.32
DDX39A-213ENST00000590315 PID1Q7Z2X4 250 aa13.03□□□□□ -0.32
DDX39A-213ENST00000590315 ZSCAN30Q86W11 494 aa13.03□□□□□ -0.32
DDX39A-213ENST00000590315 MAML2Q8IZL2 1156 aaPredicted RBP13.03□□□□□ -0.32
DDX39A-213ENST00000590315 PGBD5Q8N414 524 aa13.03□□□□□ -0.32
DDX39A-213ENST00000590315 KLHL32Q96NJ5 620 aa13.03□□□□□ -0.32
DDX39A-213ENST00000590315 PSKH2Q96QS6 385 aa13.03□□□□□ -0.32
DDX39A-213ENST00000590315 FAM129BQ96TA1 746 aa13.03□□□□□ -0.32
DDX39A-213ENST00000590315 PRRX2Q99811 253 aa13.03□□□□□ -0.32
DDX39A-213ENST00000590315 AP1M1Q9BXS5 423 aa13.03□□□□□ -0.32
DDX39A-213ENST00000590315 FRMD8P1Q9BZ68 369 aaPredicted RBP13.03□□□□□ -0.32
DDX39A-213ENST00000590315 PABPC3Q9H361 631 aaKnown RBP13.03□□□□□ -0.32
DDX39A-213ENST00000590315 ATP13A3Q9H7F0 1226 aa13.03□□□□□ -0.32
DDX39A-213ENST00000590315 CD93Q9NPY3 652 aa13.03□□□□□ -0.32
DDX39A-213ENST00000590315 FBXL12Q9NXK8 326 aa13.03□□□□□ -0.32
DDX39A-213ENST00000590315 RSPH14Q9UHP6 348 aa13.03□□□□□ -0.32
DDX39A-213ENST00000590315 HCN4Q9Y3Q4 1203 aa13.03□□□□□ -0.32
DDX39A-213ENST00000590315 MYLKQ15746 1914 aa13.03□□□□□ -0.32
DDX39A-213ENST00000590315 DOCK9Q9BZ29 2069 aa13.03□□□□□ -0.32
DDX39A-213ENST00000590315 MUC3AQ02505 3323 aa13.02□□□□□ -0.32
DDX39A-213ENST00000590315 PLXNA2O75051 1894 aa13.02□□□□□ -0.32
DDX39A-213ENST00000590315 PRR23AA6NEV1 266 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms