RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 RAMP2O60895 175 aa18.25■□□□□ 0.51
PRKCSH-211ENST00000590098 GJB6O95452 261 aa18.25■□□□□ 0.51
PRKCSH-211ENST00000590098 SNRPD1P62314 119 aaKnown RBP18.25■□□□□ 0.51
PRKCSH-211ENST00000590098 INSM1Q01101 510 aaPredicted RBP18.25■□□□□ 0.51
PRKCSH-211ENST00000590098 MANEALQ5VSG8 457 aa18.25■□□□□ 0.51
PRKCSH-211ENST00000590098 PARS2Q7L3T8 475 aaKnown RBP18.25■□□□□ 0.51
PRKCSH-211ENST00000590098 TMC6Q7Z403 805 aa18.25■□□□□ 0.51
PRKCSH-211ENST00000590098 NLRP14Q86W24 1093 aa18.25■□□□□ 0.51
PRKCSH-211ENST00000590098 SLC22A18ASQ8N1D0 253 aa18.25■□□□□ 0.51
PRKCSH-211ENST00000590098 OR6K2Q8NGY2 324 aa18.25■□□□□ 0.51
PRKCSH-211ENST00000590098 RFFLQ8WZ73 363 aa18.25■□□□□ 0.51
PRKCSH-211ENST00000590098 CENPIQ92674 756 aaPredicted RBP18.25■□□□□ 0.51
PRKCSH-211ENST00000590098 RAB7BQ96AH8 199 aa18.25■□□□□ 0.51
PRKCSH-211ENST00000590098 BMFQ96LC9 184 aa18.25■□□□□ 0.51
PRKCSH-211ENST00000590098 SELENOOQ9BVL4 669 aa18.25■□□□□ 0.51
PRKCSH-211ENST00000590098 NDFIP2Q9NV92 336 aa18.25■□□□□ 0.51
PRKCSH-211ENST00000590098 FANCLQ9NW38 375 aa18.25■□□□□ 0.51
PRKCSH-211ENST00000590098 IPO11Q9UI26 975 aaKnown RBP18.25■□□□□ 0.51
PRKCSH-211ENST00000590098 C16orf96A6NNT2 1141 aa18.24■□□□□ 0.51
PRKCSH-211ENST00000590098 FAM72CH0Y354 149 aa18.24■□□□□ 0.51
PRKCSH-211ENST00000590098 KRIT1O00522 736 aa18.24■□□□□ 0.51
PRKCSH-211ENST00000590098 FPGTO14772 594 aa18.24■□□□□ 0.51
PRKCSH-211ENST00000590098 TSPAN6O43657 245 aa18.24■□□□□ 0.51
PRKCSH-211ENST00000590098 LRIG2O94898 1065 aa18.24■□□□□ 0.51
PRKCSH-211ENST00000590098 CD160O95971 181 aa18.24■□□□□ 0.51
PRKCSH-211ENST00000590098 GSRP00390 522 aa18.24■□□□□ 0.51
PRKCSH-211ENST00000590098 CALB1P05937 261 aa18.24■□□□□ 0.51
PRKCSH-211ENST00000590098 UNGP13051 313 aaPredicted RBP18.24■□□□□ 0.51
PRKCSH-211ENST00000590098 GKP32189 559 aa18.24■□□□□ 0.51
PRKCSH-211ENST00000590098 ABCG1P45844 678 aa18.24■□□□□ 0.51
PRKCSH-211ENST00000590098 RABIFP47224 123 aa18.24■□□□□ 0.51
PRKCSH-211ENST00000590098 HDAC4P56524 1084 aa18.24■□□□□ 0.51
PRKCSH-211ENST00000590098 HNRNPKP61978 463 aaKnown RBP eCLIP18.24■□□□□ 0.51
PRKCSH-211ENST00000590098 RTP5Q14D33 572 aa18.24■□□□□ 0.51
PRKCSH-211ENST00000590098 ZNF805Q5CZA5 627 aa18.24■□□□□ 0.51
PRKCSH-211ENST00000590098 FAM72AQ5TYM5 149 aa18.24■□□□□ 0.51
PRKCSH-211ENST00000590098 FAM72DQ6L9T8 149 aa18.24■□□□□ 0.51
PRKCSH-211ENST00000590098 KYAT3Q6YP21 454 aaKnown RBP18.24■□□□□ 0.51
PRKCSH-211ENST00000590098 LRRC69Q6ZNQ3 347 aa18.24■□□□□ 0.51
PRKCSH-211ENST00000590098 FAM72BQ86X60 149 aa18.24■□□□□ 0.51
PRKCSH-211ENST00000590098 ZNF354CQ86Y25 554 aa18.24■□□□□ 0.51
PRKCSH-211ENST00000590098 CCDC185Q8N715 623 aa18.24■□□□□ 0.51
PRKCSH-211ENST00000590098 NEK11Q8NG66 645 aa18.24■□□□□ 0.51
PRKCSH-211ENST00000590098 OR2AP1Q8NGE2 309 aa18.24■□□□□ 0.51
PRKCSH-211ENST00000590098 LMBRD1Q9NUN5 540 aa18.24■□□□□ 0.51
PRKCSH-211ENST00000590098 EVA1BQ9NVM1 165 aa18.24■□□□□ 0.51
PRKCSH-211ENST00000590098 NLGN3Q9NZ94 848 aa18.24■□□□□ 0.51
PRKCSH-211ENST00000590098 SIK3Q9Y2K2 1263 aa18.24■□□□□ 0.51
PRKCSH-211ENST00000590098 ANKRD62A6NC57 917 aa18.23■□□□□ 0.51
PRKCSH-211ENST00000590098 POM121BA6NF01 834 aa18.23■□□□□ 0.51
PRKCSH-211ENST00000590098 ZSCAN5CA6NGD5 496 aaPredicted RBP18.23■□□□□ 0.51
PRKCSH-211ENST00000590098 IGLON5A6NGN9 336 aa18.23■□□□□ 0.51
PRKCSH-211ENST00000590098 EPHB6O15197 1021 aa18.23■□□□□ 0.51
PRKCSH-211ENST00000590098 RRP8O43159 456 aaKnown RBP18.23■□□□□ 0.51
PRKCSH-211ENST00000590098 POP4O95707 220 aaKnown RBP18.23■□□□□ 0.51
PRKCSH-211ENST00000590098 CKMT1AP12532 417 aa18.23■□□□□ 0.51
PRKCSH-211ENST00000590098 GPD1P21695 349 aa18.23■□□□□ 0.51
PRKCSH-211ENST00000590098 RFC1P35251 1148 aaPredicted RBP18.23■□□□□ 0.51
PRKCSH-211ENST00000590098 COPB1P53618 953 aaKnown RBP18.23■□□□□ 0.51
PRKCSH-211ENST00000590098 PTP4A2Q12974 167 aa18.23■□□□□ 0.51
PRKCSH-211ENST00000590098 FGL2Q14314 439 aa18.23■□□□□ 0.51
PRKCSH-211ENST00000590098 CLEC16AQ2KHT3 1053 aa18.23■□□□□ 0.51
PRKCSH-211ENST00000590098 ZNF542PQ5EBM4 170 aa18.23■□□□□ 0.51
PRKCSH-211ENST00000590098 LEKR1Q6ZMV7 388 aa18.23■□□□□ 0.51
PRKCSH-211ENST00000590098 SLFN11Q7Z7L1 901 aa18.23■□□□□ 0.51
PRKCSH-211ENST00000590098 DCBLD1Q8N8Z6 715 aa18.23■□□□□ 0.51
PRKCSH-211ENST00000590098 NTAN1Q96AB6 310 aa18.23■□□□□ 0.51
PRKCSH-211ENST00000590098 ARHGEF26Q96DR7 871 aa18.23■□□□□ 0.51
PRKCSH-211ENST00000590098 BBC3Q96PG8 261 aaPredicted RBP18.23■□□□□ 0.51
PRKCSH-211ENST00000590098 LENG8Q96PV6 779 aaPredicted RBP18.23■□□□□ 0.51
PRKCSH-211ENST00000590098 PCDHB18PQ96TA0 734 aa18.23■□□□□ 0.51
PRKCSH-211ENST00000590098 DUSP23Q9BVJ7 150 aa18.23■□□□□ 0.51
PRKCSH-211ENST00000590098 C1QTNF2Q9BXJ5 285 aa18.23■□□□□ 0.51
PRKCSH-211ENST00000590098 OSBPL1AQ9BXW6 950 aa18.23■□□□□ 0.51
PRKCSH-211ENST00000590098 MAGEB5Q9BZ81 275 aa18.23■□□□□ 0.51
PRKCSH-211ENST00000590098 SEPT11Q9NVA2 429 aaKnown RBP18.23■□□□□ 0.51
PRKCSH-211ENST00000590098 H3BM21 787 aa18.22■□□□□ 0.51
PRKCSH-211ENST00000590098 SCAMP1O15126 338 aa18.22■□□□□ 0.51
PRKCSH-211ENST00000590098 RAD51BO15315 384 aa18.22■□□□□ 0.51
PRKCSH-211ENST00000590098 BUB1O43683 1085 aa18.22■□□□□ 0.51
PRKCSH-211ENST00000590098 KDELR3O43731 214 aa18.22■□□□□ 0.51
PRKCSH-211ENST00000590098 MT-CO3P00414 261 aa18.22■□□□□ 0.51
PRKCSH-211ENST00000590098 UGT2B4P06133 528 aa18.22■□□□□ 0.51
PRKCSH-211ENST00000590098 DUSP3P51452 185 aaPredicted RBP18.22■□□□□ 0.51
PRKCSH-211ENST00000590098 GSCP56915 257 aaPredicted RBP18.22■□□□□ 0.51
PRKCSH-211ENST00000590098 RAD51Q06609 339 aa18.22■□□□□ 0.51
PRKCSH-211ENST00000590098 FZD2Q14332 565 aa18.22■□□□□ 0.51
PRKCSH-211ENST00000590098 ACAP1Q15027 740 aa18.22■□□□□ 0.51
PRKCSH-211ENST00000590098 MYLK3Q32MK0 819 aa18.22■□□□□ 0.51
PRKCSH-211ENST00000590098 EFHC2Q5JST6 749 aa18.22■□□□□ 0.51
PRKCSH-211ENST00000590098 SCYL2Q6P3W7 929 aa18.22■□□□□ 0.51
PRKCSH-211ENST00000590098 SASS6Q6UVJ0 657 aa18.22■□□□□ 0.51
PRKCSH-211ENST00000590098 KDM7AQ6ZMT4 941 aa18.22■□□□□ 0.51
PRKCSH-211ENST00000590098 CLEC17AQ6ZS10 378 aa18.22■□□□□ 0.51
PRKCSH-211ENST00000590098 PHF13Q86YI8 300 aaPredicted RBP18.22■□□□□ 0.51
PRKCSH-211ENST00000590098 BAP1Q92560 729 aa18.22■□□□□ 0.51
PRKCSH-211ENST00000590098 KLHL32Q96NJ5 620 aa18.22■□□□□ 0.51
PRKCSH-211ENST00000590098 NEU3Q9UQ49 428 aa18.22■□□□□ 0.51
PRKCSH-211ENST00000590098 SMG1Q96Q15 3661 aaKnown RBP18.22■□□□□ 0.51
PRKCSH-211ENST00000590098 SPTY2D1-AS1A0A0U1RR47 76 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms