RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 GABPB2Q8TAK5 448 aaPredicted RBP7.47□□□□□ -1.21
SMAD4-210ENST00000590061 UCMAQ8WVF2 138 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 C1orf54Q8WWF1 131 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 SUSD6Q92537 303 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 SNF8Q96H20 258 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 MSLNLQ96KJ4 702 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 OLFM3Q96PB7 478 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 TRMT61BQ9BVS5 477 aaKnown RBP7.47□□□□□ -1.21
SMAD4-210ENST00000590061 BBS2Q9BXC9 721 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 DDX47Q9H0S4 455 aaKnown RBP7.47□□□□□ -1.21
SMAD4-210ENST00000590061 MUC3BQ9H195 1237 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 TTYH1Q9H313 450 aaPredicted RBP7.47□□□□□ -1.21
SMAD4-210ENST00000590061 SPHK2Q9NRA0 654 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 VPS45Q9NRW7 570 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 KLHL11Q9NVR0 708 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 GPATCH2LQ9NWQ4 482 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 HCFC1R1Q9NWW0 138 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 CLEC1BQ9P126 229 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 CALCOCO1Q9P1Z2 691 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 SEPT3Q9UH03 358 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 IPO11Q9UI26 975 aaKnown RBP7.47□□□□□ -1.21
SMAD4-210ENST00000590061 DNPEPQ9ULA0 475 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 DOCK4Q8N1I0 1966 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 NUP205Q92621 2012 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.46□□□□□ -1.22
SMAD4-210ENST00000590061 CCDC151A5D8V7 595 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 HEPACAM2A8MVW5 462 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 RASA4BC9J798 803 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 DFFAO00273 331 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 PDE2AO00408 941 aaPredicted RBP7.46□□□□□ -1.22
SMAD4-210ENST00000590061 DYNC1I1O14576 645 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 FANCGO15287 622 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 KCNN4O15554 427 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 RASA4O43374 803 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 KDELR3O43731 214 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 MMP20O60882 483 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 TBL1XO60907 577 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 RGS9O75916 674 aaPredicted RBP7.46□□□□□ -1.22
SMAD4-210ENST00000590061 HEXIM1O94992 359 aaKnown RBP7.46□□□□□ -1.22
SMAD4-210ENST00000590061 PENKP01210 267 aaPredicted RBP7.46□□□□□ -1.22
SMAD4-210ENST00000590061 IFNB1P01574 187 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 KRT14P02533 472 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 KLKB1P03952 638 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 CCNB1P14635 433 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 CALRP27797 417 aaKnown RBP7.46□□□□□ -1.22
SMAD4-210ENST00000590061 SOX18P35713 384 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 CCR2P41597 374 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 LMAN1P49257 510 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 RAD51Q06609 339 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 TNK2Q07912 1038 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 NSUN2Q08J23 767 aaKnown RBP eCLIP7.46□□□□□ -1.22
SMAD4-210ENST00000590061 CCDC15Q0P6D6 951 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 SERINC3Q13530 473 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 SNX1Q13596 522 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 DOC2BQ14184 412 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 ADGRE1Q14246 886 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 SIX1Q15475 284 aaPredicted RBP7.46□□□□□ -1.22
SMAD4-210ENST00000590061 RSPO4Q2I0M5 234 aaPredicted RBP7.46□□□□□ -1.22
SMAD4-210ENST00000590061 SLC5A9Q2M3M2 681 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 ITPRIPL2Q3MIP1 535 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 LEXMQ3ZCV2 418 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 TEX44Q53QW1 395 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 NKAPLQ5M9Q1 402 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 SPDYCQ5MJ68 293 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 DAB2IPQ5VWQ8 1189 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 FYB2Q5VWT5 728 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 RNF43Q68DV7 783 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 IL31Q6EBC2 164 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 EMBQ6PCB8 327 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 SPRED2Q7Z698 418 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 ADAT2Q7Z6V5 191 aaKnown RBP7.46□□□□□ -1.22
SMAD4-210ENST00000590061 ZC3H18Q86VM9 953 aaKnown RBP7.46□□□□□ -1.22
SMAD4-210ENST00000590061 JAMLQ86YT9 394 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 CCNJLQ8IV13 435 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 ADGRG2Q8IZP9 1017 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 AHI1Q8N157 1196 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 NDUFAF2Q8N183 169 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 PYROXD2Q8N2H3 581 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 DCAF4L2Q8NA75 395 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 ITFG1Q8TB96 612 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 CSGALNACT1Q8TDX6 532 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 SEC14L1Q92503 715 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 ISG20Q96AZ6 181 aaKnown RBP7.46□□□□□ -1.22
SMAD4-210ENST00000590061 LRRC39Q96DD0 335 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 TCEAL4Q96EI5 215 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 SPATA13Q96N96 652 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 NAT9Q9BTE0 207 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 PHF7Q9BWX1 381 aaPredicted RBP7.46□□□□□ -1.22
SMAD4-210ENST00000590061 CEP44Q9C0F1 390 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 ACBD3Q9H3P7 528 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 C8orf33Q9H7E9 229 aaPredicted RBP7.46□□□□□ -1.22
SMAD4-210ENST00000590061 UBE2ZQ9H832 354 aaPredicted RBP7.46□□□□□ -1.22
SMAD4-210ENST00000590061 XAB2Q9HCS7 855 aaKnown RBP7.46□□□□□ -1.22
SMAD4-210ENST00000590061 ATP13A1Q9HD20 1204 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 EIF2B3Q9NR50 452 aaKnown RBP7.46□□□□□ -1.22
SMAD4-210ENST00000590061 DEC1Q9P2X7 70 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 PRKAG3Q9UGI9 489 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 SLC25A13Q9UJS0 675 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 VPS28Q9UK41 221 aa7.46□□□□□ -1.22
SMAD4-210ENST00000590061 TPX2Q9ULW0 747 aaKnown RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms