RNA–Protein interactions for RNA: ENST00000589964.1

CROCCP3-203, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 3 BASIC

Gene CROCCP3, Length 255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-203ENST00000589964 CNPY3Q9BT09 278 aa17.13■□□□□ 0.33
CROCCP3-203ENST00000589964 CEP44Q9C0F1 390 aa17.13■□□□□ 0.33
CROCCP3-203ENST00000589964 HAUS4Q9H6D7 363 aa17.13■□□□□ 0.33
CROCCP3-203ENST00000589964 FTSJ1Q9UET6 329 aa17.13■□□□□ 0.33
CROCCP3-203ENST00000589964 PNMA8BQ9ULN7 279 aaPredicted RBP17.13■□□□□ 0.33
CROCCP3-203ENST00000589964 DAAM1Q9Y4D1 1078 aa17.13■□□□□ 0.33
CROCCP3-203ENST00000589964 A0A1B0GTH6 734 aa17.12■□□□□ 0.33
CROCCP3-203ENST00000589964 IGLON5A6NGN9 336 aa17.12■□□□□ 0.33
CROCCP3-203ENST00000589964 RASA4BC9J798 803 aa17.12■□□□□ 0.33
CROCCP3-203ENST00000589964 PRAMEF26H0Y7S4 382 aa17.12■□□□□ 0.33
CROCCP3-203ENST00000589964 KRIT1O00522 736 aa17.12■□□□□ 0.33
CROCCP3-203ENST00000589964 ENC1O14682 589 aa17.12■□□□□ 0.33
CROCCP3-203ENST00000589964 RASA4O43374 803 aa17.12■□□□□ 0.33
CROCCP3-203ENST00000589964 THEGLP0DJG4 465 aa17.12■□□□□ 0.33
CROCCP3-203ENST00000589964 L1CAMP32004 1257 aa17.12■□□□□ 0.33
CROCCP3-203ENST00000589964 RGRP47804 291 aa17.12■□□□□ 0.33
CROCCP3-203ENST00000589964 RXRGP48443 463 aa17.12■□□□□ 0.33
CROCCP3-203ENST00000589964 ACADVLP49748 655 aa17.12■□□□□ 0.33
CROCCP3-203ENST00000589964 ZNF165P49910 485 aa17.12■□□□□ 0.33
CROCCP3-203ENST00000589964 NEK3P51956 506 aa17.12■□□□□ 0.33
CROCCP3-203ENST00000589964 SEMG2Q02383 582 aa17.12■□□□□ 0.33
CROCCP3-203ENST00000589964 MAPK8IP2Q13387 824 aaPredicted RBP17.12■□□□□ 0.33
CROCCP3-203ENST00000589964 POLD3Q15054 466 aaPredicted RBP17.12■□□□□ 0.33
CROCCP3-203ENST00000589964 ASIC2Q16515 512 aa17.12■□□□□ 0.33
CROCCP3-203ENST00000589964 ARL13BQ3SXY8 428 aa17.12■□□□□ 0.33
CROCCP3-203ENST00000589964 SETMARQ53H47 684 aaPredicted RBP17.12■□□□□ 0.33
CROCCP3-203ENST00000589964 TMPRSS7Q7RTY8 843 aa17.12■□□□□ 0.33
CROCCP3-203ENST00000589964 TMC6Q7Z403 805 aa17.12■□□□□ 0.33
CROCCP3-203ENST00000589964 LUZP1Q86V48 1076 aa17.12■□□□□ 0.33
CROCCP3-203ENST00000589964 CPNE8Q86YQ8 564 aa17.12■□□□□ 0.33
CROCCP3-203ENST00000589964 RYBPQ8N488 228 aaPredicted RBP17.12■□□□□ 0.33
CROCCP3-203ENST00000589964 NPWQ8N729 165 aa17.12■□□□□ 0.33
CROCCP3-203ENST00000589964 TSC1Q92574 1164 aa17.12■□□□□ 0.33
CROCCP3-203ENST00000589964 KCTD15Q96SI1 283 aaPredicted RBP17.12■□□□□ 0.33
CROCCP3-203ENST00000589964 KLF6Q99612 283 aaPredicted RBP17.12■□□□□ 0.33
CROCCP3-203ENST00000589964 CALN1Q9BXU9 219 aa17.12■□□□□ 0.33
CROCCP3-203ENST00000589964 CBX8Q9HC52 389 aa17.12■□□□□ 0.33
CROCCP3-203ENST00000589964 PCSK1NQ9UHG2 260 aa17.12■□□□□ 0.33
CROCCP3-203ENST00000589964 KLF15Q9UIH9 416 aa17.12■□□□□ 0.33
CROCCP3-203ENST00000589964 DMTF1Q9Y222 760 aa17.12■□□□□ 0.33
CROCCP3-203ENST00000589964 TDRD6O60522 2096 aaKnown RBP17.12■□□□□ 0.33
CROCCP3-203ENST00000589964 NBEAQ8NFP9 2946 aa17.12■□□□□ 0.33
CROCCP3-203ENST00000589964 SYCE3A1L190 88 aa17.11■□□□□ 0.33
CROCCP3-203ENST00000589964 C16orf96A6NNT2 1141 aa17.11■□□□□ 0.33
CROCCP3-203ENST00000589964 J3KR12 359 aa17.11■□□□□ 0.33
CROCCP3-203ENST00000589964 CASC3O15234 703 aaKnown RBP17.11■□□□□ 0.33
CROCCP3-203ENST00000589964 BUB1O43683 1085 aa17.11■□□□□ 0.33
CROCCP3-203ENST00000589964 KDELR3O43731 214 aa17.11■□□□□ 0.33
CROCCP3-203ENST00000589964 PRKCGP05129 697 aa17.11■□□□□ 0.33
CROCCP3-203ENST00000589964 HOXB3P14651 431 aaPredicted RBP17.11■□□□□ 0.33
CROCCP3-203ENST00000589964 TNFAIP3P21580 790 aa17.11■□□□□ 0.33
CROCCP3-203ENST00000589964 RECQLP46063 649 aaPredicted RBP17.11■□□□□ 0.33
CROCCP3-203ENST00000589964 STAT4Q14765 748 aa17.11■□□□□ 0.33
CROCCP3-203ENST00000589964 SUZ12Q15022 739 aaKnown RBP17.11■□□□□ 0.33
CROCCP3-203ENST00000589964 CYTH1Q15438 398 aa17.11■□□□□ 0.33
CROCCP3-203ENST00000589964 PLEKHA7Q6IQ23 1121 aa17.11■□□□□ 0.33
CROCCP3-203ENST00000589964 ARHGAP36Q6ZRI8 547 aa17.11■□□□□ 0.33
CROCCP3-203ENST00000589964 ZSWIM9Q86XI8 627 aa17.11■□□□□ 0.33
CROCCP3-203ENST00000589964 KLHL32Q96NJ5 620 aa17.11■□□□□ 0.33
CROCCP3-203ENST00000589964 SNRNP25Q9BV90 132 aaKnown RBP17.11■□□□□ 0.33
CROCCP3-203ENST00000589964 MAGEH1Q9H213 219 aa17.11■□□□□ 0.33
CROCCP3-203ENST00000589964 PDFQ9HBH1 243 aa17.11■□□□□ 0.33
CROCCP3-203ENST00000589964 FARP1Q9Y4F1 1045 aaPredicted RBP17.11■□□□□ 0.33
CROCCP3-203ENST00000589964 ACACAQ13085 2346 aa17.11■□□□□ 0.33
CROCCP3-203ENST00000589964 FAM208BQ5VWN6 2430 aa17.1■□□□□ 0.33
CROCCP3-203ENST00000589964 FFAR2O15552 330 aa17.1■□□□□ 0.33
CROCCP3-203ENST00000589964 SIGLEC6O43699 453 aa17.1■□□□□ 0.33
CROCCP3-203ENST00000589964 PIGNO95427 931 aa17.1■□□□□ 0.33
CROCCP3-203ENST00000589964 PAK4O96013 591 aaPredicted RBP17.1■□□□□ 0.33
CROCCP3-203ENST00000589964 SLC20A2Q08357 652 aa17.1■□□□□ 0.33
CROCCP3-203ENST00000589964 SERINC3Q13530 473 aa17.1■□□□□ 0.33
CROCCP3-203ENST00000589964 SMAD1Q15797 465 aaKnown RBP17.1■□□□□ 0.33
CROCCP3-203ENST00000589964 MYLK3Q32MK0 819 aa17.1■□□□□ 0.33
CROCCP3-203ENST00000589964 EFHC2Q5JST6 749 aa17.1■□□□□ 0.33
CROCCP3-203ENST00000589964 TXNRD3NBQ6F5E7 133 aa17.1■□□□□ 0.33
CROCCP3-203ENST00000589964 ABI3BPQ7Z7G0 1075 aa17.1■□□□□ 0.33
CROCCP3-203ENST00000589964 OR2AP1Q8NGE2 309 aa17.1■□□□□ 0.33
CROCCP3-203ENST00000589964 FUBP1Q96AE4 644 aaKnown RBP17.1■□□□□ 0.33
CROCCP3-203ENST00000589964 ISG20Q96AZ6 181 aaKnown RBP17.1■□□□□ 0.33
CROCCP3-203ENST00000589964 KLHDC7BQ96G42 594 aa17.1■□□□□ 0.33
CROCCP3-203ENST00000589964 CCDC114Q96M63 670 aa17.1■□□□□ 0.33
CROCCP3-203ENST00000589964 LRRC19Q9H756 370 aa17.1■□□□□ 0.33
CROCCP3-203ENST00000589964 ERVMER34-1Q9H9K5 563 aa17.1■□□□□ 0.33
CROCCP3-203ENST00000589964 DYRK4Q9NR20 520 aa17.1■□□□□ 0.33
CROCCP3-203ENST00000589964 GPR27Q9NS67 375 aa17.1■□□□□ 0.33
CROCCP3-203ENST00000589964 LY6G6EA0A0G2JKS1 128 aa17.09■□□□□ 0.33
CROCCP3-203ENST00000589964 TMEM191CA6NGB0 347 aa17.09■□□□□ 0.33
CROCCP3-203ENST00000589964 DFNA5O60443 496 aa17.09■□□□□ 0.33
CROCCP3-203ENST00000589964 NEBLO76041 1014 aa17.09■□□□□ 0.33
CROCCP3-203ENST00000589964 LDOC1O95751 146 aaPredicted RBP17.09■□□□□ 0.33
CROCCP3-203ENST00000589964 GSRP00390 522 aa17.09■□□□□ 0.33
CROCCP3-203ENST00000589964 FTLP02792 175 aaPredicted RBP17.09■□□□□ 0.33
CROCCP3-203ENST00000589964 HNRNPA2B1P22626 353 aaKnown RBP17.09■□□□□ 0.33
CROCCP3-203ENST00000589964 PSMA2P25787 234 aa17.09■□□□□ 0.33
CROCCP3-203ENST00000589964 IL1R2P27930 398 aa17.09■□□□□ 0.33
CROCCP3-203ENST00000589964 PBX1P40424 430 aa17.09■□□□□ 0.33
CROCCP3-203ENST00000589964 FZD2Q14332 565 aa17.09■□□□□ 0.33
CROCCP3-203ENST00000589964 NR1I3Q14994 352 aa17.09■□□□□ 0.33
CROCCP3-203ENST00000589964 PROX2Q3B8N5 592 aa17.09■□□□□ 0.33
CROCCP3-203ENST00000589964 ACBD5Q5T8D3 534 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms