RNA–Protein interactions for RNA: ENST00000589445.1

R3HDM4-205, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 705 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-205ENST00000589445 ZNF528Q3MIS6 628 aa22.77■■□□□ 1.24
R3HDM4-205ENST00000589445 SLC45A4Q5BKX6 768 aa22.77■■□□□ 1.24
R3HDM4-205ENST00000589445 LONP2Q86WA8 852 aa22.77■■□□□ 1.24
R3HDM4-205ENST00000589445 PAF1Q8N7H5 531 aa22.77■■□□□ 1.24
R3HDM4-205ENST00000589445 TTC13Q8NBP0 860 aa22.77■■□□□ 1.24
R3HDM4-205ENST00000589445 PIP4K2CQ8TBX8 421 aa22.77■■□□□ 1.24
R3HDM4-205ENST00000589445 MAML1Q92585 1016 aa22.77■■□□□ 1.24
R3HDM4-205ENST00000589445 ZNF419Q96HQ0 510 aaPredicted RBP22.77■■□□□ 1.24
R3HDM4-205ENST00000589445 SPACA7Q96KW9 195 aa22.77■■□□□ 1.24
R3HDM4-205ENST00000589445 PSKH2Q96QS6 385 aa22.77■■□□□ 1.24
R3HDM4-205ENST00000589445 FAM129BQ96TA1 746 aa22.77■■□□□ 1.24
R3HDM4-205ENST00000589445 HEPHQ9BQS7 1158 aa22.77■■□□□ 1.24
R3HDM4-205ENST00000589445 BRD8Q9H0E9 1235 aa22.77■■□□□ 1.24
R3HDM4-205ENST00000589445 EBF1Q9UH73 591 aa22.77■■□□□ 1.24
R3HDM4-205ENST00000589445 SNX12Q9UMY4 172 aa22.77■■□□□ 1.24
R3HDM4-205ENST00000589445 CYP8B1Q9UNU6 501 aa22.77■■□□□ 1.24
R3HDM4-205ENST00000589445 INVSQ9Y283 1065 aa22.77■■□□□ 1.24
R3HDM4-205ENST00000589445 R3HDM2Q9Y2K5 976 aaKnown RBP22.77■■□□□ 1.24
R3HDM4-205ENST00000589445 FANCMQ8IYD8 2048 aa22.77■■□□□ 1.24
R3HDM4-205ENST00000589445 INSIG1O15503 277 aa22.76■■□□□ 1.23
R3HDM4-205ENST00000589445 HLA-DQB2P05538 268 aa22.76■■□□□ 1.23
R3HDM4-205ENST00000589445 CTSLP07711 333 aa22.76■■□□□ 1.23
R3HDM4-205ENST00000589445 HSPA9P38646 679 aaKnown RBP22.76■■□□□ 1.23
R3HDM4-205ENST00000589445 METAP1P53582 386 aa22.76■■□□□ 1.23
R3HDM4-205ENST00000589445 RAD51Q06609 339 aa22.76■■□□□ 1.23
R3HDM4-205ENST00000589445 ZBTB17Q13105 803 aa22.76■■□□□ 1.23
R3HDM4-205ENST00000589445 LONRF2Q1L5Z9 754 aa22.76■■□□□ 1.23
R3HDM4-205ENST00000589445 ARSIQ5FYB1 569 aa22.76■■□□□ 1.23
R3HDM4-205ENST00000589445 FAM124AQ86V42 546 aa22.76■■□□□ 1.23
R3HDM4-205ENST00000589445 WDR5BQ86VZ2 330 aa22.76■■□□□ 1.23
R3HDM4-205ENST00000589445 RLN3Q8WXF3 142 aa22.76■■□□□ 1.23
R3HDM4-205ENST00000589445 ATG4AQ8WYN0 398 aa22.76■■□□□ 1.23
R3HDM4-205ENST00000589445 C16orf45Q96MC5 204 aaPredicted RBP22.76■■□□□ 1.23
R3HDM4-205ENST00000589445 OSBPL9Q96SU4 736 aa22.76■■□□□ 1.23
R3HDM4-205ENST00000589445 FAM126AQ9BYI3 521 aaPredicted RBP22.76■■□□□ 1.23
R3HDM4-205ENST00000589445 PABPC3Q9H361 631 aaKnown RBP22.76■■□□□ 1.23
R3HDM4-205ENST00000589445 C10orf88Q9H8K7 445 aa22.76■■□□□ 1.23
R3HDM4-205ENST00000589445 DYRK4Q9NR20 520 aa22.76■■□□□ 1.23
R3HDM4-205ENST00000589445 RBM22Q9NW64 420 aaKnown RBP eCLIP22.76■■□□□ 1.23
R3HDM4-205ENST00000589445 ZSCAN32Q9NX65 697 aa22.76■■□□□ 1.23
R3HDM4-205ENST00000589445 WASF2Q9Y6W5 498 aa22.76■■□□□ 1.23
R3HDM4-205ENST00000589445 ZFHX2Q9C0A1 2572 aaPredicted RBP22.75■■□□□ 1.23
R3HDM4-205ENST00000589445 CTAGE9A4FU28 777 aa22.75■■□□□ 1.23
R3HDM4-205ENST00000589445 HACD1B0YJ81 288 aa22.75■■□□□ 1.23
R3HDM4-205ENST00000589445 LEFTY1O75610 366 aa22.75■■□□□ 1.23
R3HDM4-205ENST00000589445 GJB3O75712 270 aa22.75■■□□□ 1.23
R3HDM4-205ENST00000589445 PIGNO95427 931 aa22.75■■□□□ 1.23
R3HDM4-205ENST00000589445 JCHAINP01591 159 aa22.75■■□□□ 1.23
R3HDM4-205ENST00000589445 UGT2B4P06133 528 aa22.75■■□□□ 1.23
R3HDM4-205ENST00000589445 RBP3P10745 1247 aa22.75■■□□□ 1.23
R3HDM4-205ENST00000589445 HOXA6P31267 233 aa22.75■■□□□ 1.23
R3HDM4-205ENST00000589445 SLC8A1P32418 973 aa22.75■■□□□ 1.23
R3HDM4-205ENST00000589445 IFI35P80217 286 aaPredicted RBP22.75■■□□□ 1.23
R3HDM4-205ENST00000589445 ZNF33AQ06730 810 aa22.75■■□□□ 1.23
R3HDM4-205ENST00000589445 SRSF5Q13243 272 aaKnown RBP22.75■■□□□ 1.23
R3HDM4-205ENST00000589445 HNRNPDQ14103 355 aaKnown RBP22.75■■□□□ 1.23
R3HDM4-205ENST00000589445 MYLK3Q32MK0 819 aa22.75■■□□□ 1.23
R3HDM4-205ENST00000589445 FAM182AQ5T1J6 154 aa22.75■■□□□ 1.23
R3HDM4-205ENST00000589445 FAM46CQ5VWP2 391 aa22.75■■□□□ 1.23
R3HDM4-205ENST00000589445 DARS2Q6PI48 645 aaKnown RBP22.75■■□□□ 1.23
R3HDM4-205ENST00000589445 PGBD5Q8N414 524 aa22.75■■□□□ 1.23
R3HDM4-205ENST00000589445 ATOH1Q92858 354 aaPredicted RBP22.75■■□□□ 1.23
R3HDM4-205ENST00000589445 FATE1Q969F0 183 aa22.75■■□□□ 1.23
R3HDM4-205ENST00000589445 PBKQ96KB5 322 aa22.75■■□□□ 1.23
R3HDM4-205ENST00000589445 OMDQ99983 421 aa22.75■■□□□ 1.23
R3HDM4-205ENST00000589445 MGME1Q9BQP7 344 aa22.75■■□□□ 1.23
R3HDM4-205ENST00000589445 POLR1EQ9GZS1 481 aaKnown RBP22.75■■□□□ 1.23
R3HDM4-205ENST00000589445 SCUBE2Q9NQ36 999 aa22.75■■□□□ 1.23
R3HDM4-205ENST00000589445 SARDHQ9UL12 918 aa22.75■■□□□ 1.23
R3HDM4-205ENST00000589445 A0A1W2PP55 124 aa22.74■■□□□ 1.23
R3HDM4-205ENST00000589445 TTC24A2A3L6 582 aaPredicted RBP22.74■■□□□ 1.23
R3HDM4-205ENST00000589445 RNF103O00237 685 aa22.74■■□□□ 1.23
R3HDM4-205ENST00000589445 PLK4O00444 970 aa22.74■■□□□ 1.23
R3HDM4-205ENST00000589445 RNASEH2AO75792 299 aaKnown RBP22.74■■□□□ 1.23
R3HDM4-205ENST00000589445 SCNN1BP51168 640 aa22.74■■□□□ 1.23
R3HDM4-205ENST00000589445 XRCC4Q13426 336 aa22.74■■□□□ 1.23
R3HDM4-205ENST00000589445 CFAP58Q5T655 872 aa22.74■■□□□ 1.23
R3HDM4-205ENST00000589445 SRLQ86TD4 932 aa22.74■■□□□ 1.23
R3HDM4-205ENST00000589445 FAM160A2Q8N612 972 aaPredicted RBP22.74■■□□□ 1.23
R3HDM4-205ENST00000589445 PPP1R16AQ96I34 528 aa22.74■■□□□ 1.23
R3HDM4-205ENST00000589445 MS4A14Q96JA4 679 aa22.74■■□□□ 1.23
R3HDM4-205ENST00000589445 AGAP3Q96P47 875 aa22.74■■□□□ 1.23
R3HDM4-205ENST00000589445 FERMT1Q9BQL6 677 aa22.74■■□□□ 1.23
R3HDM4-205ENST00000589445 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.74■■□□□ 1.23
R3HDM4-205ENST00000589445 CEP192Q8TEP8 1941 aa22.74■■□□□ 1.23
R3HDM4-205ENST00000589445 CCDC163A0A0D9SF12 145 aa22.73■■□□□ 1.23
R3HDM4-205ENST00000589445 MTSS1O43312 755 aa22.73■■□□□ 1.23
R3HDM4-205ENST00000589445 POP4O95707 220 aaKnown RBP22.73■■□□□ 1.23
R3HDM4-205ENST00000589445 C5AR1P21730 350 aa22.73■■□□□ 1.23
R3HDM4-205ENST00000589445 RBL1P28749 1068 aa22.73■■□□□ 1.23
R3HDM4-205ENST00000589445 AP1S1P61966 158 aa22.73■■□□□ 1.23
R3HDM4-205ENST00000589445 ZBTB16Q05516 673 aa22.73■■□□□ 1.23
R3HDM4-205ENST00000589445 USP39Q53GS9 565 aaKnown RBP22.73■■□□□ 1.23
R3HDM4-205ENST00000589445 PLPP6Q8IY26 295 aa22.73■■□□□ 1.23
R3HDM4-205ENST00000589445 HDDC3Q8N4P3 179 aa22.73■■□□□ 1.23
R3HDM4-205ENST00000589445 AADATQ8N5Z0 425 aa22.73■■□□□ 1.23
R3HDM4-205ENST00000589445 TEX26Q8N6G2 289 aa22.73■■□□□ 1.23
R3HDM4-205ENST00000589445 COG1Q8WTW3 980 aa22.73■■□□□ 1.23
R3HDM4-205ENST00000589445 MAIP1Q8WWC4 291 aa22.73■■□□□ 1.23
R3HDM4-205ENST00000589445 HTR3CQ8WXA8 447 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms