RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 PAPSS2O95340 614 aaPredicted RBP12.34□□□□□ -0.43
DNMT1-218ENST00000589294 CR2P20023 1033 aa12.34□□□□□ -0.43
DNMT1-218ENST00000589294 CXCL12P48061 93 aa12.34□□□□□ -0.43
DNMT1-218ENST00000589294 SCNN1BP51168 640 aa12.34□□□□□ -0.43
DNMT1-218ENST00000589294 CCR3P51677 355 aa12.34□□□□□ -0.43
DNMT1-218ENST00000589294 ZBTB17Q13105 803 aa12.34□□□□□ -0.43
DNMT1-218ENST00000589294 MTAPQ13126 283 aa12.34□□□□□ -0.43
DNMT1-218ENST00000589294 P3H1Q32P28 736 aa12.34□□□□□ -0.43
DNMT1-218ENST00000589294 ANKRD20A2Q5SQ80 823 aa12.34□□□□□ -0.43
DNMT1-218ENST00000589294 ANKRD20A1Q5TYW2 823 aa12.34□□□□□ -0.43
DNMT1-218ENST00000589294 ANKRD20A3Q5VUR7 823 aa12.34□□□□□ -0.43
DNMT1-218ENST00000589294 ITPRIPL1Q6GPH6 555 aa12.34□□□□□ -0.43
DNMT1-218ENST00000589294 PKN3Q6P5Z2 889 aa12.34□□□□□ -0.43
DNMT1-218ENST00000589294 CCDC137Q6PK04 289 aaKnown RBP12.34□□□□□ -0.43
DNMT1-218ENST00000589294 DPY19L3Q6ZPD9 716 aa12.34□□□□□ -0.43
DNMT1-218ENST00000589294 Q6ZVU0 165 aa12.34□□□□□ -0.43
DNMT1-218ENST00000589294 ZNF567Q8N184 647 aa12.34□□□□□ -0.43
DNMT1-218ENST00000589294 PGBD5Q8N414 524 aa12.34□□□□□ -0.43
DNMT1-218ENST00000589294 CAMKK1Q8N5S9 505 aa12.34□□□□□ -0.43
DNMT1-218ENST00000589294 ZNF366Q8N895 744 aa12.34□□□□□ -0.43
DNMT1-218ENST00000589294 MNS1Q8NEH6 495 aa12.34□□□□□ -0.43
DNMT1-218ENST00000589294 SPATA4Q8NEY3 305 aa12.34□□□□□ -0.43
DNMT1-218ENST00000589294 OR2T3Q8NH03 318 aa12.34□□□□□ -0.43
DNMT1-218ENST00000589294 GRK7Q8WTQ7 553 aa12.34□□□□□ -0.43
DNMT1-218ENST00000589294 OR8D1Q8WZ84 308 aa12.34□□□□□ -0.43
DNMT1-218ENST00000589294 SPATA13Q96N96 652 aa12.34□□□□□ -0.43
DNMT1-218ENST00000589294 AGAP3Q96P47 875 aa12.34□□□□□ -0.43
DNMT1-218ENST00000589294 PPP1R2P1Q96PQ5 205 aa12.34□□□□□ -0.43
DNMT1-218ENST00000589294 HEPHQ9BQS7 1158 aa12.34□□□□□ -0.43
DNMT1-218ENST00000589294 SLC25A51Q9H1U9 297 aa12.34□□□□□ -0.43
DNMT1-218ENST00000589294 RSPH9Q9H1X1 276 aaPredicted RBP12.34□□□□□ -0.43
DNMT1-218ENST00000589294 GLOD4Q9HC38 313 aa12.34□□□□□ -0.43
DNMT1-218ENST00000589294 CD248Q9HCU0 757 aa12.34□□□□□ -0.43
DNMT1-218ENST00000589294 KLHL8Q9P2G9 620 aaPredicted RBP12.34□□□□□ -0.43
DNMT1-218ENST00000589294 PCYOX1Q9UHG3 505 aa12.34□□□□□ -0.43
DNMT1-218ENST00000589294 PPM1HQ9ULR3 514 aa12.34□□□□□ -0.43
DNMT1-218ENST00000589294 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.33□□□□□ -0.44
DNMT1-218ENST00000589294 MUSKO15146 869 aa12.33□□□□□ -0.44
DNMT1-218ENST00000589294 INSIG1O15503 277 aa12.33□□□□□ -0.44
DNMT1-218ENST00000589294 ALDH1A2O94788 518 aa12.33□□□□□ -0.44
DNMT1-218ENST00000589294 PRNPP04156 253 aa12.33□□□□□ -0.44
DNMT1-218ENST00000589294 HLA-DQB2P05538 268 aa12.33□□□□□ -0.44
DNMT1-218ENST00000589294 HOXA6P31267 233 aa12.33□□□□□ -0.44
DNMT1-218ENST00000589294 ACTN2P35609 894 aa12.33□□□□□ -0.44
DNMT1-218ENST00000589294 KCNJ1P48048 391 aa12.33□□□□□ -0.44
DNMT1-218ENST00000589294 CCNHP51946 323 aaPredicted RBP12.33□□□□□ -0.44
DNMT1-218ENST00000589294 AP1S1P61966 158 aa12.33□□□□□ -0.44
DNMT1-218ENST00000589294 ZBTB16Q05516 673 aa12.33□□□□□ -0.44
DNMT1-218ENST00000589294 ITKQ08881 620 aa12.33□□□□□ -0.44
DNMT1-218ENST00000589294 PARP6Q2NL67 630 aa12.33□□□□□ -0.44
DNMT1-218ENST00000589294 DNTTIP2Q5QJE6 756 aaKnown RBP12.33□□□□□ -0.44
DNMT1-218ENST00000589294 FAM46CQ5VWP2 391 aa12.33□□□□□ -0.44
DNMT1-218ENST00000589294 KIAA1211LQ6NV74 962 aa12.33□□□□□ -0.44
DNMT1-218ENST00000589294 TTC27Q6P3X3 843 aa12.33□□□□□ -0.44
DNMT1-218ENST00000589294 NCEH1Q6PIU2 408 aa12.33□□□□□ -0.44
DNMT1-218ENST00000589294 TMEM92Q6UXU6 159 aa12.33□□□□□ -0.44
DNMT1-218ENST00000589294 GSTA5Q7RTV2 222 aa12.33□□□□□ -0.44
DNMT1-218ENST00000589294 STK40Q8N2I9 435 aa12.33□□□□□ -0.44
DNMT1-218ENST00000589294 RYBPQ8N488 228 aaPredicted RBP12.33□□□□□ -0.44
DNMT1-218ENST00000589294 CCDC89Q8N998 374 aa12.33□□□□□ -0.44
DNMT1-218ENST00000589294 HCAR2Q8TDS4 363 aa12.33□□□□□ -0.44
DNMT1-218ENST00000589294 SLCO2A1Q92959 643 aa12.33□□□□□ -0.44
DNMT1-218ENST00000589294 IMP4Q96G21 291 aaKnown RBP12.33□□□□□ -0.44
DNMT1-218ENST00000589294 ZNF419Q96HQ0 510 aaPredicted RBP12.33□□□□□ -0.44
DNMT1-218ENST00000589294 ZNF641Q96N77 438 aaPredicted RBP12.33□□□□□ -0.44
DNMT1-218ENST00000589294 FCRL5Q96RD9 977 aa12.33□□□□□ -0.44
DNMT1-218ENST00000589294 TUBGCP5Q96RT8 1024 aa12.33□□□□□ -0.44
DNMT1-218ENST00000589294 SEMA3CQ99985 751 aa12.33□□□□□ -0.44
DNMT1-218ENST00000589294 OSBPL1AQ9BXW6 950 aa12.33□□□□□ -0.44
DNMT1-218ENST00000589294 TM6SF2Q9BZW4 377 aa12.33□□□□□ -0.44
DNMT1-218ENST00000589294 MTG2Q9H4K7 406 aa12.33□□□□□ -0.44
DNMT1-218ENST00000589294 NOD2Q9HC29 1040 aa12.33□□□□□ -0.44
DNMT1-218ENST00000589294 SCUBE2Q9NQ36 999 aa12.33□□□□□ -0.44
DNMT1-218ENST00000589294 IL36AQ9UHA7 158 aa12.33□□□□□ -0.44
DNMT1-218ENST00000589294 CUL9Q8IWT3 2517 aa12.33□□□□□ -0.44
DNMT1-218ENST00000589294 A0A1W2PQ67 120 aa12.32□□□□□ -0.44
DNMT1-218ENST00000589294 BNIP3LO60238 219 aa12.32□□□□□ -0.44
DNMT1-218ENST00000589294 IFNB1P01574 187 aa12.32□□□□□ -0.44
DNMT1-218ENST00000589294 SERPINF2P08697 491 aa12.32□□□□□ -0.44
DNMT1-218ENST00000589294 COL9A1P20849 921 aa12.32□□□□□ -0.44
DNMT1-218ENST00000589294 CD68P34810 354 aaPredicted RBP12.32□□□□□ -0.44
DNMT1-218ENST00000589294 RGRP47804 291 aa12.32□□□□□ -0.44
DNMT1-218ENST00000589294 COPAP53621 1224 aa12.32□□□□□ -0.44
DNMT1-218ENST00000589294 MAXP61244 160 aa12.32□□□□□ -0.44
DNMT1-218ENST00000589294 SATB1Q01826 763 aa12.32□□□□□ -0.44
DNMT1-218ENST00000589294 SFSWAPQ12872 951 aaKnown RBP12.32□□□□□ -0.44
DNMT1-218ENST00000589294 SLC14A2Q15849 920 aa12.32□□□□□ -0.44
DNMT1-218ENST00000589294 ARSIQ5FYB1 569 aa12.32□□□□□ -0.44
DNMT1-218ENST00000589294 ATXN7L2Q5T6C5 722 aaPredicted RBP12.32□□□□□ -0.44
DNMT1-218ENST00000589294 SYDE1Q6ZW31 735 aaPredicted RBP12.32□□□□□ -0.44
DNMT1-218ENST00000589294 TMPRSS6Q8IU80 811 aa12.32□□□□□ -0.44
DNMT1-218ENST00000589294 CHST14Q8NCH0 376 aa12.32□□□□□ -0.44
DNMT1-218ENST00000589294 ARRDC2Q8TBH0 407 aa12.32□□□□□ -0.44
DNMT1-218ENST00000589294 EXOC2Q96KP1 924 aa12.32□□□□□ -0.44
DNMT1-218ENST00000589294 DDX47Q9H0S4 455 aaKnown RBP12.32□□□□□ -0.44
DNMT1-218ENST00000589294 ATP13A3Q9H7F0 1226 aa12.32□□□□□ -0.44
DNMT1-218ENST00000589294 VPS45Q9NRW7 570 aa12.32□□□□□ -0.44
DNMT1-218ENST00000589294 PAK5Q9P286 719 aa12.32□□□□□ -0.44
DNMT1-218ENST00000589294 EVLQ9UI08 416 aaPredicted RBP12.32□□□□□ -0.44
DNMT1-218ENST00000589294 SCML1Q9UN30 329 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms