RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 PSKH2Q96QS6 385 aa12.24□□□□□ -0.45
CCBE1-203ENST00000589116 MGME1Q9BQP7 344 aa12.24□□□□□ -0.45
CCBE1-203ENST00000589116 SPON2Q9BUD6 331 aa12.24□□□□□ -0.45
CCBE1-203ENST00000589116 FICDQ9BVA6 458 aa12.24□□□□□ -0.45
CCBE1-203ENST00000589116 KIF9Q9HAQ2 790 aa12.24□□□□□ -0.45
CCBE1-203ENST00000589116 SLC28A3Q9HAS3 691 aa12.24□□□□□ -0.45
CCBE1-203ENST00000589116 ARNT2Q9HBZ2 717 aa12.24□□□□□ -0.45
CCBE1-203ENST00000589116 DZANK1Q9NVP4 752 aa12.24□□□□□ -0.45
CCBE1-203ENST00000589116 MOCS1Q9NZB8 636 aa12.24□□□□□ -0.45
CCBE1-203ENST00000589116 ZNF180Q9UJW8 692 aa12.24□□□□□ -0.45
CCBE1-203ENST00000589116 IKBKGQ9Y6K9 419 aa12.24□□□□□ -0.45
CCBE1-203ENST00000589116 MYO7AQ13402 2215 aa12.24□□□□□ -0.45
CCBE1-203ENST00000589116 CXorf51AA0A1B0GTR3 108 aa12.23□□□□□ -0.45
CCBE1-203ENST00000589116 FAM159BA6NKW6 160 aa12.23□□□□□ -0.45
CCBE1-203ENST00000589116 PMPCBO75439 489 aa12.23□□□□□ -0.45
CCBE1-203ENST00000589116 USP1O94782 785 aa12.23□□□□□ -0.45
CCBE1-203ENST00000589116 INHBAP08476 426 aa12.23□□□□□ -0.45
CCBE1-203ENST00000589116 CES1P23141 567 aa12.23□□□□□ -0.45
CCBE1-203ENST00000589116 WEE1P30291 646 aa12.23□□□□□ -0.45
CCBE1-203ENST00000589116 NRIP1P48552 1158 aa12.23□□□□□ -0.45
CCBE1-203ENST00000589116 WNT3AP56704 352 aa12.23□□□□□ -0.45
CCBE1-203ENST00000589116 CRADDP78560 199 aa12.23□□□□□ -0.45
CCBE1-203ENST00000589116 ITKQ08881 620 aa12.23□□□□□ -0.45
CCBE1-203ENST00000589116 NIPAL4Q0D2K0 466 aa12.23□□□□□ -0.45
CCBE1-203ENST00000589116 OLIG2Q13516 323 aa12.23□□□□□ -0.45
CCBE1-203ENST00000589116 EFTUD2Q15029 972 aaKnown RBP eCLIP12.23□□□□□ -0.45
CCBE1-203ENST00000589116 POTEHQ6S545 545 aa12.23□□□□□ -0.45
CCBE1-203ENST00000589116 RANBP10Q6VN20 620 aa12.23□□□□□ -0.45
CCBE1-203ENST00000589116 SLC26A11Q86WA9 606 aa12.23□□□□□ -0.45
CCBE1-203ENST00000589116 PGBD5Q8N414 524 aa12.23□□□□□ -0.45
CCBE1-203ENST00000589116 ARRDC2Q8TBH0 407 aa12.23□□□□□ -0.45
CCBE1-203ENST00000589116 GDPD5Q8WTR4 605 aa12.23□□□□□ -0.45
CCBE1-203ENST00000589116 DDI1Q8WTU0 396 aa12.23□□□□□ -0.45
CCBE1-203ENST00000589116 DCAKDQ8WVC6 231 aa12.23□□□□□ -0.45
CCBE1-203ENST00000589116 SMG7Q92540 1137 aaKnown RBP12.23□□□□□ -0.45
CCBE1-203ENST00000589116 CDKL2Q92772 493 aa12.23□□□□□ -0.45
CCBE1-203ENST00000589116 OTUB2Q96DC9 234 aa12.23□□□□□ -0.45
CCBE1-203ENST00000589116 CINPQ9BW66 212 aaPredicted RBP12.23□□□□□ -0.45
CCBE1-203ENST00000589116 CERS4Q9HA82 394 aa12.23□□□□□ -0.45
CCBE1-203ENST00000589116 PIDD1Q9HB75 910 aa12.23□□□□□ -0.45
CCBE1-203ENST00000589116 TBC1D14Q9P2M4 693 aa12.23□□□□□ -0.45
CCBE1-203ENST00000589116 TBK1Q9UHD2 729 aa12.23□□□□□ -0.45
CCBE1-203ENST00000589116 SOX13Q9UN79 622 aa12.23□□□□□ -0.45
CCBE1-203ENST00000589116 OR51B4Q9Y5P0 310 aa12.23□□□□□ -0.45
CCBE1-203ENST00000589116 IQANK1A0A1B0GTG1 560 aa12.22□□□□□ -0.45
CCBE1-203ENST00000589116 CBX4O00257 560 aa12.22□□□□□ -0.45
CCBE1-203ENST00000589116 SCAMP3O14828 347 aaKnown RBP12.22□□□□□ -0.45
CCBE1-203ENST00000589116 SHOX2O60902 331 aaPredicted RBP12.22□□□□□ -0.45
CCBE1-203ENST00000589116 MMP2P08253 660 aa12.22□□□□□ -0.45
CCBE1-203ENST00000589116 CD86P42081 329 aa12.22□□□□□ -0.45
CCBE1-203ENST00000589116 ATP1A2P50993 1020 aa12.22□□□□□ -0.45
CCBE1-203ENST00000589116 MAXP61244 160 aa12.22□□□□□ -0.45
CCBE1-203ENST00000589116 NTHL1P78549 312 aa12.22□□□□□ -0.45
CCBE1-203ENST00000589116 DSC2Q02487 901 aa12.22□□□□□ -0.45
CCBE1-203ENST00000589116 SLC12A1Q13621 1099 aa12.22□□□□□ -0.45
CCBE1-203ENST00000589116 KCNC3Q14003 757 aa12.22□□□□□ -0.45
CCBE1-203ENST00000589116 TERF2Q15554 542 aa12.22□□□□□ -0.45
CCBE1-203ENST00000589116 ZNF77Q15935 545 aa12.22□□□□□ -0.45
CCBE1-203ENST00000589116 INO80DQ53TQ3 878 aaPredicted RBP12.22□□□□□ -0.45
CCBE1-203ENST00000589116 PCID2Q5JVF3 399 aa12.22□□□□□ -0.45
CCBE1-203ENST00000589116 DENND5AQ6IQ26 1287 aa12.22□□□□□ -0.45
CCBE1-203ENST00000589116 TRABD2AQ86V40 505 aa12.22□□□□□ -0.45
CCBE1-203ENST00000589116 CYP4X1Q8N118 509 aa12.22□□□□□ -0.45
CCBE1-203ENST00000589116 ZNF557Q8N988 423 aaPredicted RBP12.22□□□□□ -0.45
CCBE1-203ENST00000589116 APOL2Q9BQE5 337 aa12.22□□□□□ -0.45
CCBE1-203ENST00000589116 FEM1AQ9BSK4 669 aa12.22□□□□□ -0.45
CCBE1-203ENST00000589116 C2orf49Q9BVC5 232 aaPredicted RBP12.22□□□□□ -0.45
CCBE1-203ENST00000589116 CAPS2Q9BXY5 557 aa12.22□□□□□ -0.45
CCBE1-203ENST00000589116 MRM3Q9HC36 420 aaKnown RBP12.22□□□□□ -0.45
CCBE1-203ENST00000589116 C11orf16Q9NQ32 467 aa12.22□□□□□ -0.45
CCBE1-203ENST00000589116 PIH1D1Q9NWS0 290 aaKnown RBP12.22□□□□□ -0.45
CCBE1-203ENST00000589116 VPS28Q9UK41 221 aa12.22□□□□□ -0.45
CCBE1-203ENST00000589116 CCL26Q9Y258 94 aa12.22□□□□□ -0.45
CCBE1-203ENST00000589116 MRPS23Q9Y3D9 190 aaKnown RBP12.22□□□□□ -0.45
CCBE1-203ENST00000589116 RPS6KL1Q9Y6S9 549 aa12.22□□□□□ -0.45
CCBE1-203ENST00000589116 ZMPSTE24O75844 475 aa12.22□□□□□ -0.45
CCBE1-203ENST00000589116 EPOP01588 193 aa12.22□□□□□ -0.45
CCBE1-203ENST00000589116 SERPINF2P08697 491 aa12.22□□□□□ -0.45
CCBE1-203ENST00000589116 CEBPBP17676 345 aa12.22□□□□□ -0.45
CCBE1-203ENST00000589116 KRT15P19012 456 aa12.22□□□□□ -0.45
CCBE1-203ENST00000589116 CSKP41240 450 aa12.22□□□□□ -0.45
CCBE1-203ENST00000589116 ARF5P84085 180 aa12.22□□□□□ -0.45
CCBE1-203ENST00000589116 FSCBQ5H9T9 825 aa12.22□□□□□ -0.45
CCBE1-203ENST00000589116 CERCAMQ5T4B2 595 aa12.22□□□□□ -0.45
CCBE1-203ENST00000589116 LGSNQ5TDP6 509 aa12.22□□□□□ -0.45
CCBE1-203ENST00000589116 FYB2Q5VWT5 728 aa12.22□□□□□ -0.45
CCBE1-203ENST00000589116 MARK2Q7KZI7 788 aaKnown RBP12.22□□□□□ -0.45
CCBE1-203ENST00000589116 METTL3Q86U44 580 aaKnown RBP12.22□□□□□ -0.45
CCBE1-203ENST00000589116 CTAGE3PQ8IX95 158 aa12.22□□□□□ -0.45
CCBE1-203ENST00000589116 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.22□□□□□ -0.45
CCBE1-203ENST00000589116 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.22□□□□□ -0.45
CCBE1-203ENST00000589116 TTC16Q8NEE8 873 aa12.22□□□□□ -0.45
CCBE1-203ENST00000589116 FIBINQ8TAL6 211 aa12.22□□□□□ -0.45
CCBE1-203ENST00000589116 ACDQ96AP0 544 aa12.22□□□□□ -0.45
CCBE1-203ENST00000589116 ZNF669Q96BR6 464 aaPredicted RBP12.22□□□□□ -0.45
CCBE1-203ENST00000589116 ALG14Q96F25 216 aa12.22□□□□□ -0.45
CCBE1-203ENST00000589116 FEM1CQ96JP0 617 aa12.22□□□□□ -0.45
CCBE1-203ENST00000589116 SEMA3CQ99985 751 aa12.22□□□□□ -0.45
CCBE1-203ENST00000589116 KIFC1Q9BW19 673 aa12.22□□□□□ -0.45
CCBE1-203ENST00000589116 SMG9Q9H0W8 520 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms