RNA–Protein interactions for RNA: ENST00000588200.1

PKN1-211, Transcript of protein kinase N1, human

TSL 3

Gene PKN1, Length 548 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKN1-211	ENST00000588200	POP4	O95707	220 aa	Known RBP	13.57	□□□□□ -0.24
PKN1-211	ENST00000588200	CSF2	P04141	144 aa		13.57	□□□□□ -0.24
PKN1-211	ENST00000588200	TPM2	P07951	284 aa		13.57	□□□□□ -0.24
PKN1-211	ENST00000588200	PRLR	P16471	622 aa		13.57	□□□□□ -0.24
PKN1-211	ENST00000588200	ACVRL1	P37023	503 aa		13.57	□□□□□ -0.24
PKN1-211	ENST00000588200	EIF2S3	P41091	472 aa	Known RBP	13.57	□□□□□ -0.24
PKN1-211	ENST00000588200	RABIF	P47224	123 aa		13.57	□□□□□ -0.24
PKN1-211	ENST00000588200	YBEY	P58557	167 aa	Predicted RBP	13.57	□□□□□ -0.24
PKN1-211	ENST00000588200	FGL2	Q14314	439 aa		13.57	□□□□□ -0.24
PKN1-211	ENST00000588200	C15orf59	Q2T9L4	293 aa	Predicted RBP	13.57	□□□□□ -0.24
PKN1-211	ENST00000588200	ZNF805	Q5CZA5	627 aa		13.57	□□□□□ -0.24
PKN1-211	ENST00000588200	FKBP15	Q5T1M5	1219 aa		13.57	□□□□□ -0.24
PKN1-211	ENST00000588200	CDCP2	Q5VXM1	449 aa		13.57	□□□□□ -0.24
PKN1-211	ENST00000588200	SEL1L3	Q68CR1	1132 aa		13.57	□□□□□ -0.24
PKN1-211	ENST00000588200		Q6ZSR6	202 aa		13.57	□□□□□ -0.24
PKN1-211	ENST00000588200	PARS2	Q7L3T8	475 aa	Known RBP	13.57	□□□□□ -0.24
PKN1-211	ENST00000588200	DRC7	Q8IY82	874 aa		13.57	□□□□□ -0.24
PKN1-211	ENST00000588200	OR2AP1	Q8NGE2	309 aa		13.57	□□□□□ -0.24
PKN1-211	ENST00000588200	JOSD2	Q8TAC2	188 aa		13.57	□□□□□ -0.24
PKN1-211	ENST00000588200	GRIN3A	Q8TCU5	1115 aa		13.57	□□□□□ -0.24
PKN1-211	ENST00000588200	HCAR2	Q8TDS4	363 aa		13.57	□□□□□ -0.24
PKN1-211	ENST00000588200	ERGIC2	Q96RQ1	377 aa		13.57	□□□□□ -0.24
PKN1-211	ENST00000588200	HECA	Q9UBI9	543 aa	Predicted RBP	13.57	□□□□□ -0.24
PKN1-211	ENST00000588200	HPCAL4	Q9UM19	191 aa		13.57	□□□□□ -0.24
PKN1-211	ENST00000588200	CLCA2	Q9UQC9	943 aa		13.57	□□□□□ -0.24
PKN1-211	ENST00000588200	CA5B	Q9Y2D0	317 aa		13.57	□□□□□ -0.24
PKN1-211	ENST00000588200	C16orf96	A6NNT2	1141 aa		13.56	□□□□□ -0.24
PKN1-211	ENST00000588200	FAM72C	H0Y354	149 aa		13.56	□□□□□ -0.24
PKN1-211	ENST00000588200	EPHB6	O15197	1021 aa		13.56	□□□□□ -0.24
PKN1-211	ENST00000588200	RAMP2	O60895	175 aa		13.56	□□□□□ -0.24
PKN1-211	ENST00000588200	PAK4	O96013	591 aa	Predicted RBP	13.56	□□□□□ -0.24
PKN1-211	ENST00000588200	CALB1	P05937	261 aa		13.56	□□□□□ -0.24
PKN1-211	ENST00000588200	PLEK	P08567	350 aa	Predicted RBP	13.56	□□□□□ -0.24
PKN1-211	ENST00000588200	ALPPL2	P10696	532 aa		13.56	□□□□□ -0.24
PKN1-211	ENST00000588200	NME1	P15531	152 aa	Known RBP	13.56	□□□□□ -0.24
PKN1-211	ENST00000588200	HTR7	P34969	479 aa		13.56	□□□□□ -0.24
PKN1-211	ENST00000588200	RFC1	P35251	1148 aa	Predicted RBP	13.56	□□□□□ -0.24
PKN1-211	ENST00000588200	NSF	P46459	744 aa	Known RBP	13.56	□□□□□ -0.24
PKN1-211	ENST00000588200	SUOX	P51687	545 aa		13.56	□□□□□ -0.24
PKN1-211	ENST00000588200	PFN3	P60673	137 aa		13.56	□□□□□ -0.24
PKN1-211	ENST00000588200	SNRPD1	P62314	119 aa	Known RBP	13.56	□□□□□ -0.24
PKN1-211	ENST00000588200	C1QBP	Q07021	282 aa	Known RBP	13.56	□□□□□ -0.24
PKN1-211	ENST00000588200	POLD3	Q15054	466 aa	Predicted RBP	13.56	□□□□□ -0.24
PKN1-211	ENST00000588200	CLEC16A	Q2KHT3	1053 aa		13.56	□□□□□ -0.24
PKN1-211	ENST00000588200	SOWAHC	Q53LP3	525 aa	Predicted RBP	13.56	□□□□□ -0.24
PKN1-211	ENST00000588200	RAB6C	Q53S08	254 aa		13.56	□□□□□ -0.24
PKN1-211	ENST00000588200	HS1BP3	Q53T59	392 aa		13.56	□□□□□ -0.24
PKN1-211	ENST00000588200	PPP1R15B	Q5SWA1	713 aa		13.56	□□□□□ -0.24
PKN1-211	ENST00000588200	FAM72A	Q5TYM5	149 aa		13.56	□□□□□ -0.24
PKN1-211	ENST00000588200	FAM72D	Q6L9T8	149 aa		13.56	□□□□□ -0.24
PKN1-211	ENST00000588200	WDR59	Q6PJI9	974 aa		13.56	□□□□□ -0.24
PKN1-211	ENST00000588200	C19orf48	Q6RUI8	117 aa		13.56	□□□□□ -0.24
PKN1-211	ENST00000588200	FAM72B	Q86X60	149 aa		13.56	□□□□□ -0.24
PKN1-211	ENST00000588200	GPT2	Q8TD30	523 aa		13.56	□□□□□ -0.24
PKN1-211	ENST00000588200	HNRNPLL	Q8WVV9	542 aa	Known RBP	13.56	□□□□□ -0.24
PKN1-211	ENST00000588200	GRAMD1A	Q96CP6	724 aa		13.56	□□□□□ -0.24
PKN1-211	ENST00000588200	TBC1D31	Q96DN5	1066 aa		13.56	□□□□□ -0.24
PKN1-211	ENST00000588200	PCDHB18P	Q96TA0	734 aa		13.56	□□□□□ -0.24
PKN1-211	ENST00000588200	C11orf70	Q9BRQ4	267 aa		13.56	□□□□□ -0.24
PKN1-211	ENST00000588200	CPEB1	Q9BZB8	566 aa	Known RBP	13.56	□□□□□ -0.24
PKN1-211	ENST00000588200	RAB6C	Q9H0N0	254 aa		13.56	□□□□□ -0.24
PKN1-211	ENST00000588200	FAM207A	Q9NSI2	230 aa	Predicted RBP	13.56	□□□□□ -0.24
PKN1-211	ENST00000588200	FANCL	Q9NW38	375 aa		13.56	□□□□□ -0.24
PKN1-211	ENST00000588200	UCKL1	Q9NWZ5	548 aa		13.56	□□□□□ -0.24
PKN1-211	ENST00000588200	NCKIPSD	Q9NZQ3	722 aa		13.56	□□□□□ -0.24
PKN1-211	ENST00000588200	ADAM22	Q9P0K1	906 aa		13.56	□□□□□ -0.24
PKN1-211	ENST00000588200	DKK3	Q9UBP4	350 aa		13.56	□□□□□ -0.24
PKN1-211	ENST00000588200	FCF1	Q9Y324	198 aa	Known RBP	13.56	□□□□□ -0.24
PKN1-211	ENST00000588200	ASXL3	Q9C0F0	2248 aa		13.55	□□□□□ -0.24
PKN1-211	ENST00000588200	LY6G6E	A0A0G2JKS1	128 aa		13.55	□□□□□ -0.24
PKN1-211	ENST00000588200	POM121B	A6NF01	834 aa		13.55	□□□□□ -0.24
PKN1-211	ENST00000588200	LGALS16	A8MUM7	142 aa		13.55	□□□□□ -0.24
PKN1-211	ENST00000588200	TPP1	O14773	563 aa		13.55	□□□□□ -0.24
PKN1-211	ENST00000588200	SDC3	O75056	442 aa		13.55	□□□□□ -0.24
PKN1-211	ENST00000588200	DXO	O77932	396 aa	Known RBP	13.55	□□□□□ -0.24
PKN1-211	ENST00000588200	GPD1	P21695	349 aa		13.55	□□□□□ -0.24
PKN1-211	ENST00000588200	KLK7	P49862	253 aa		13.55	□□□□□ -0.24
PKN1-211	ENST00000588200	DUSP3	P51452	185 aa	Predicted RBP	13.55	□□□□□ -0.24
PKN1-211	ENST00000588200	ZNF143	P52747	638 aa	Predicted RBP	13.55	□□□□□ -0.24
PKN1-211	ENST00000588200	COPB1	P53618	953 aa	Known RBP	13.55	□□□□□ -0.24
PKN1-211	ENST00000588200	CLDN2	P57739	230 aa		13.55	□□□□□ -0.24
PKN1-211	ENST00000588200	YPEL5	P62699	121 aa		13.55	□□□□□ -0.24
PKN1-211	ENST00000588200	FZD2	Q14332	565 aa		13.55	□□□□□ -0.24
PKN1-211	ENST00000588200	CDO1	Q16878	200 aa		13.55	□□□□□ -0.24
PKN1-211	ENST00000588200	MYLK3	Q32MK0	819 aa		13.55	□□□□□ -0.24
PKN1-211	ENST00000588200	CCDC157	Q569K6	752 aa		13.55	□□□□□ -0.24
PKN1-211	ENST00000588200	PPP1R2P3	Q6NXS1	205 aa		13.55	□□□□□ -0.24
PKN1-211	ENST00000588200	IGF2-AS	Q6U949	168 aa		13.55	□□□□□ -0.24
PKN1-211	ENST00000588200	MON1B	Q7L1V2	547 aa		13.55	□□□□□ -0.24
PKN1-211	ENST00000588200	APTX	Q7Z2E3	356 aa	Known RBP	13.55	□□□□□ -0.24
PKN1-211	ENST00000588200	SLFN11	Q7Z7L1	901 aa		13.55	□□□□□ -0.24
PKN1-211	ENST00000588200	PARG	Q86W56	976 aa		13.55	□□□□□ -0.24
PKN1-211	ENST00000588200	UMODL1-AS1	Q8N2C9	162 aa		13.55	□□□□□ -0.24
PKN1-211	ENST00000588200	RTL3	Q8N8U3	475 aa	Known RBP	13.55	□□□□□ -0.24
PKN1-211	ENST00000588200	SLC30A5	Q8TAD4	765 aa		13.55	□□□□□ -0.24
PKN1-211	ENST00000588200	FAM172A	Q8WUF8	416 aa		13.55	□□□□□ -0.24
PKN1-211	ENST00000588200	KLK6	Q92876	244 aa		13.55	□□□□□ -0.24
PKN1-211	ENST00000588200	CENPT	Q96BT3	561 aa		13.55	□□□□□ -0.24
PKN1-211	ENST00000588200	VCPIP1	Q96JH7	1222 aa		13.55	□□□□□ -0.24
PKN1-211	ENST00000588200	CALN1	Q9BXU9	219 aa		13.55	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms