RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 TSTD1Q8NFU3 115 aa10.86□□□□□ -0.67
SMARCA4-213ENST00000587988 OR2T3Q8NH03 318 aa10.86□□□□□ -0.67
SMARCA4-213ENST00000587988 HMGB4Q8WW32 186 aa10.86□□□□□ -0.67
SMARCA4-213ENST00000587988 ZNF592Q92610 1267 aa10.86□□□□□ -0.67
SMARCA4-213ENST00000587988 MRGPRX1Q96LB2 322 aa10.86□□□□□ -0.67
SMARCA4-213ENST00000587988 GDAP1L1Q96MZ0 367 aa10.86□□□□□ -0.67
SMARCA4-213ENST00000587988 AGAP3Q96P47 875 aa10.86□□□□□ -0.67
SMARCA4-213ENST00000587988 MGME1Q9BQP7 344 aa10.86□□□□□ -0.67
SMARCA4-213ENST00000587988 HEPHQ9BQS7 1158 aa10.86□□□□□ -0.67
SMARCA4-213ENST00000587988 C1QTNF1Q9BXJ1 281 aa10.86□□□□□ -0.67
SMARCA4-213ENST00000587988 RSPH9Q9H1X1 276 aaPredicted RBP10.86□□□□□ -0.67
SMARCA4-213ENST00000587988 POLMQ9NP87 494 aaPredicted RBP10.86□□□□□ -0.67
SMARCA4-213ENST00000587988 PRMT8Q9NR22 394 aaPredicted RBP10.86□□□□□ -0.67
SMARCA4-213ENST00000587988 ATP8A1Q9Y2Q0 1164 aa10.86□□□□□ -0.67
SMARCA4-213ENST00000587988 ZDBF2Q9HCK1 2354 aa10.85□□□□□ -0.67
SMARCA4-213ENST00000587988 KRIT1O00522 736 aa10.85□□□□□ -0.67
SMARCA4-213ENST00000587988 ZBTB24O43167 697 aaPredicted RBP10.85□□□□□ -0.67
SMARCA4-213ENST00000587988 LAMTOR5O43504 91 aa10.85□□□□□ -0.67
SMARCA4-213ENST00000587988 LEFTY1O75610 366 aa10.85□□□□□ -0.67
SMARCA4-213ENST00000587988 PIGNO95427 931 aa10.85□□□□□ -0.67
SMARCA4-213ENST00000587988 IGSF6O95976 241 aa10.85□□□□□ -0.67
SMARCA4-213ENST00000587988 TDGF1P13385 188 aa10.85□□□□□ -0.67
SMARCA4-213ENST00000587988 RECQLP46063 649 aaPredicted RBP10.85□□□□□ -0.67
SMARCA4-213ENST00000587988 KCNJ1P48048 391 aa10.85□□□□□ -0.67
SMARCA4-213ENST00000587988 CSNK1DP48730 415 aa10.85□□□□□ -0.67
SMARCA4-213ENST00000587988 SCNN1BP51168 640 aa10.85□□□□□ -0.67
SMARCA4-213ENST00000587988 DSC2Q02487 901 aa10.85□□□□□ -0.67
SMARCA4-213ENST00000587988 ITKQ08881 620 aa10.85□□□□□ -0.67
SMARCA4-213ENST00000587988 NSUN2Q08J23 767 aaKnown RBP eCLIP10.85□□□□□ -0.67
SMARCA4-213ENST00000587988 NIPAL4Q0D2K0 466 aa10.85□□□□□ -0.67
SMARCA4-213ENST00000587988 BYSLQ13895 437 aaKnown RBP10.85□□□□□ -0.67
SMARCA4-213ENST00000587988 ELAVL3Q14576 367 aaKnown RBP10.85□□□□□ -0.67
SMARCA4-213ENST00000587988 POM121L1PQ3SYA9 428 aa10.85□□□□□ -0.67
SMARCA4-213ENST00000587988 ANO7Q6IWH7 933 aa10.85□□□□□ -0.67
SMARCA4-213ENST00000587988 DRICH1Q6PGQ1 229 aaPredicted RBP10.85□□□□□ -0.67
SMARCA4-213ENST00000587988 NCEH1Q6PIU2 408 aa10.85□□□□□ -0.67
SMARCA4-213ENST00000587988 PRUNE1Q86TP1 453 aa10.85□□□□□ -0.67
SMARCA4-213ENST00000587988 ZNF567Q8N184 647 aa10.85□□□□□ -0.67
SMARCA4-213ENST00000587988 BBS5Q8N3I7 341 aa10.85□□□□□ -0.67
SMARCA4-213ENST00000587988 FAM71DQ8N9W8 422 aa10.85□□□□□ -0.67
SMARCA4-213ENST00000587988 ARRDC2Q8TBH0 407 aa10.85□□□□□ -0.67
SMARCA4-213ENST00000587988 PIP4K2CQ8TBX8 421 aa10.85□□□□□ -0.67
SMARCA4-213ENST00000587988 GRIN3AQ8TCU5 1115 aa10.85□□□□□ -0.67
SMARCA4-213ENST00000587988 OR8D1Q8WZ84 308 aa10.85□□□□□ -0.67
SMARCA4-213ENST00000587988 NKD2Q969F2 451 aaPredicted RBP10.85□□□□□ -0.67
SMARCA4-213ENST00000587988 TEKT5Q96M29 485 aa10.85□□□□□ -0.67
SMARCA4-213ENST00000587988 NUDCD1Q96RS6 583 aa10.85□□□□□ -0.67
SMARCA4-213ENST00000587988 NAP1L3Q99457 506 aaPredicted RBP10.85□□□□□ -0.67
SMARCA4-213ENST00000587988 FRMD8P1Q9BZ68 369 aaPredicted RBP10.85□□□□□ -0.67
SMARCA4-213ENST00000587988 ZDHHC6Q9H6R6 413 aa10.85□□□□□ -0.67
SMARCA4-213ENST00000587988 NOD2Q9HC29 1040 aa10.85□□□□□ -0.67
SMARCA4-213ENST00000587988 CD93Q9NPY3 652 aa10.85□□□□□ -0.67
SMARCA4-213ENST00000587988 EBF1Q9UH73 591 aa10.85□□□□□ -0.67
SMARCA4-213ENST00000587988 IL36AQ9UHA7 158 aa10.85□□□□□ -0.67
SMARCA4-213ENST00000587988 PPM1HQ9ULR3 514 aa10.85□□□□□ -0.67
SMARCA4-213ENST00000587988 TTLL3Q9Y4R7 772 aa10.85□□□□□ -0.67
SMARCA4-213ENST00000587988 ANKRD36A6QL64 1941 aa10.84□□□□□ -0.67
SMARCA4-213ENST00000587988 F5H423 210 aaPredicted RBP10.84□□□□□ -0.67
SMARCA4-213ENST00000587988 KIF2AO00139 706 aaPredicted RBP10.84□□□□□ -0.67
SMARCA4-213ENST00000587988 PLK4O00444 970 aa10.84□□□□□ -0.67
SMARCA4-213ENST00000587988 ALOX15BO15296 676 aa10.84□□□□□ -0.67
SMARCA4-213ENST00000587988 MID1O15344 667 aa10.84□□□□□ -0.67
SMARCA4-213ENST00000587988 MTSS1O43312 755 aa10.84□□□□□ -0.67
SMARCA4-213ENST00000587988 NEBLO76041 1014 aa10.84□□□□□ -0.67
SMARCA4-213ENST00000587988 URI1O94763 535 aaPredicted RBP10.84□□□□□ -0.67
SMARCA4-213ENST00000587988 APBB3O95704 486 aa10.84□□□□□ -0.67
SMARCA4-213ENST00000587988 POP4O95707 220 aaKnown RBP10.84□□□□□ -0.67
SMARCA4-213ENST00000587988 IL1BP01584 269 aa10.84□□□□□ -0.67
SMARCA4-213ENST00000587988 TUBB4AP04350 444 aa10.84□□□□□ -0.67
SMARCA4-213ENST00000587988 MMP2P08253 660 aa10.84□□□□□ -0.67
SMARCA4-213ENST00000587988 C7P10643 843 aa10.84□□□□□ -0.67
SMARCA4-213ENST00000587988 ETS1P14921 441 aa10.84□□□□□ -0.67
SMARCA4-213ENST00000587988 SLC8A1P32418 973 aa10.84□□□□□ -0.67
SMARCA4-213ENST00000587988 HSPA9P38646 679 aaKnown RBP10.84□□□□□ -0.67
SMARCA4-213ENST00000587988 PSMD8P48556 350 aa10.84□□□□□ -0.67
SMARCA4-213ENST00000587988 CSTF1Q05048 431 aaKnown RBP10.84□□□□□ -0.67
SMARCA4-213ENST00000587988 CST6Q15828 149 aa10.84□□□□□ -0.67
SMARCA4-213ENST00000587988 CYP1B1Q16678 543 aa10.84□□□□□ -0.67
SMARCA4-213ENST00000587988 ANKRD20A2Q5SQ80 823 aa10.84□□□□□ -0.67
SMARCA4-213ENST00000587988 ANKRD20A1Q5TYW2 823 aa10.84□□□□□ -0.67
SMARCA4-213ENST00000587988 ANKRD20A3Q5VUR7 823 aa10.84□□□□□ -0.67
SMARCA4-213ENST00000587988 ZNF776Q68DI1 518 aaPredicted RBP10.84□□□□□ -0.67
SMARCA4-213ENST00000587988 ALG1LQ6GMV1 187 aa10.84□□□□□ -0.67
SMARCA4-213ENST00000587988 TTC27Q6P3X3 843 aa10.84□□□□□ -0.67
SMARCA4-213ENST00000587988 KIAA1324Q6UXG2 1013 aaKnown RBP10.84□□□□□ -0.67
SMARCA4-213ENST00000587988 PID1Q7Z2X4 250 aa10.84□□□□□ -0.67
SMARCA4-213ENST00000587988 RASSF3Q86WH2 238 aa10.84□□□□□ -0.67
SMARCA4-213ENST00000587988 PGBD3Q8N328 593 aa10.84□□□□□ -0.67
SMARCA4-213ENST00000587988 CAMKK1Q8N5S9 505 aa10.84□□□□□ -0.67
SMARCA4-213ENST00000587988 GLIS1Q8NBF1 620 aa10.84□□□□□ -0.67
SMARCA4-213ENST00000587988 TMIEQ8NEW7 156 aa10.84□□□□□ -0.67
SMARCA4-213ENST00000587988 CCDC110Q8TBZ0 833 aa10.84□□□□□ -0.67
SMARCA4-213ENST00000587988 MAGOHBQ96A72 148 aaKnown RBP10.84□□□□□ -0.67
SMARCA4-213ENST00000587988 ARRDC3Q96B67 414 aa10.84□□□□□ -0.67
SMARCA4-213ENST00000587988 SIPA1Q96FS4 1042 aa10.84□□□□□ -0.67
SMARCA4-213ENST00000587988 CCDC114Q96M63 670 aa10.84□□□□□ -0.67
SMARCA4-213ENST00000587988 SEMA3CQ99985 751 aa10.84□□□□□ -0.67
SMARCA4-213ENST00000587988 CPEB1Q9BZB8 566 aaKnown RBP10.84□□□□□ -0.67
SMARCA4-213ENST00000587988 TPSD1Q9BZJ3 242 aa10.84□□□□□ -0.67
SMARCA4-213ENST00000587988 POLR1EQ9GZS1 481 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms