RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 C4orf22Q6V702 233 aa17.21■□□□□ 0.35
PRKCSH-203ENST00000586486 SYDE1Q6ZW31 735 aaPredicted RBP17.21■□□□□ 0.35
PRKCSH-203ENST00000586486 PID1Q7Z2X4 250 aa17.21■□□□□ 0.35
PRKCSH-203ENST00000586486 ZNF366Q8N895 744 aa17.21■□□□□ 0.35
PRKCSH-203ENST00000586486 TXNDC5Q8NBS9 432 aaKnown RBP17.21■□□□□ 0.35
PRKCSH-203ENST00000586486 CCDC110Q8TBZ0 833 aa17.21■□□□□ 0.35
PRKCSH-203ENST00000586486 ATG2BQ96BY7 2078 aa17.21■□□□□ 0.35
PRKCSH-203ENST00000586486 EXOC2Q96KP1 924 aa17.21■□□□□ 0.35
PRKCSH-203ENST00000586486 KRT12Q99456 494 aa17.21■□□□□ 0.35
PRKCSH-203ENST00000586486 CHRDQ9H2X0 955 aa17.21■□□□□ 0.35
PRKCSH-203ENST00000586486 GLOD4Q9HC38 313 aa17.21■□□□□ 0.35
PRKCSH-203ENST00000586486 SIT1Q9Y3P8 196 aa17.21■□□□□ 0.35
PRKCSH-203ENST00000586486 TMEM221A6NGB7 291 aa17.2■□□□□ 0.34
PRKCSH-203ENST00000586486 M0R296 226 aa17.2■□□□□ 0.34
PRKCSH-203ENST00000586486 ALOX15BO15296 676 aa17.2■□□□□ 0.34
PRKCSH-203ENST00000586486 ATG13O75143 517 aa17.2■□□□□ 0.34
PRKCSH-203ENST00000586486 ACTN2P35609 894 aa17.2■□□□□ 0.34
PRKCSH-203ENST00000586486 PTGIRP43119 386 aa17.2■□□□□ 0.34
PRKCSH-203ENST00000586486 RECQLP46063 649 aaPredicted RBP17.2■□□□□ 0.34
PRKCSH-203ENST00000586486 CCNHP51946 323 aaPredicted RBP17.2■□□□□ 0.34
PRKCSH-203ENST00000586486 MAXP61244 160 aa17.2■□□□□ 0.34
PRKCSH-203ENST00000586486 AP1S1P61966 158 aa17.2■□□□□ 0.34
PRKCSH-203ENST00000586486 SLC14A2Q15849 920 aa17.2■□□□□ 0.34
PRKCSH-203ENST00000586486 ATXN7L2Q5T6C5 722 aaPredicted RBP17.2■□□□□ 0.34
PRKCSH-203ENST00000586486 DPY19L3Q6ZPD9 716 aa17.2■□□□□ 0.34
PRKCSH-203ENST00000586486 ARHGEF18Q6ZSZ5 1173 aa17.2■□□□□ 0.34
PRKCSH-203ENST00000586486 GLIS1Q8NBF1 620 aa17.2■□□□□ 0.34
PRKCSH-203ENST00000586486 FLCNQ8NFG4 579 aa17.2■□□□□ 0.34
PRKCSH-203ENST00000586486 ARRDC2Q8TBH0 407 aa17.2■□□□□ 0.34
PRKCSH-203ENST00000586486 IMP4Q96G21 291 aaKnown RBP17.2■□□□□ 0.34
PRKCSH-203ENST00000586486 PPP1R2P1Q96PQ5 205 aa17.2■□□□□ 0.34
PRKCSH-203ENST00000586486 CARD6Q9BX69 1037 aa17.2■□□□□ 0.34
PRKCSH-203ENST00000586486 SLC25A51Q9H1U9 297 aa17.2■□□□□ 0.34
PRKCSH-203ENST00000586486 FBRSQ9HAH7 460 aa17.2■□□□□ 0.34
PRKCSH-203ENST00000586486 CD248Q9HCU0 757 aa17.2■□□□□ 0.34
PRKCSH-203ENST00000586486 PAK5Q9P286 719 aa17.2■□□□□ 0.34
PRKCSH-203ENST00000586486 TTLL3Q9Y4R7 772 aa17.2■□□□□ 0.34
PRKCSH-203ENST00000586486 A0A1W2PQF6 199 aa17.19■□□□□ 0.34
PRKCSH-203ENST00000586486 STK25O00506 426 aa17.19■□□□□ 0.34
PRKCSH-203ENST00000586486 SIN3BO75182 1162 aa17.19■□□□□ 0.34
PRKCSH-203ENST00000586486 C7P10643 843 aa17.19■□□□□ 0.34
PRKCSH-203ENST00000586486 HOXB2P14652 356 aa17.19■□□□□ 0.34
PRKCSH-203ENST00000586486 NFKB1P19838 968 aa17.19■□□□□ 0.34
PRKCSH-203ENST00000586486 WASP42768 502 aa17.19■□□□□ 0.34
PRKCSH-203ENST00000586486 GAS6Q14393 721 aa17.19■□□□□ 0.34
PRKCSH-203ENST00000586486 STARD3Q14849 445 aa17.19■□□□□ 0.34
PRKCSH-203ENST00000586486 PKN3Q6P5Z2 889 aa17.19■□□□□ 0.34
PRKCSH-203ENST00000586486 SYT13Q7L8C5 426 aa17.19■□□□□ 0.34
PRKCSH-203ENST00000586486 MAATS1Q7Z4T9 603 aa17.19■□□□□ 0.34
PRKCSH-203ENST00000586486 SRLQ86TD4 932 aa17.19■□□□□ 0.34
PRKCSH-203ENST00000586486 MMGT1Q8N4V1 131 aa17.19■□□□□ 0.34
PRKCSH-203ENST00000586486 CCHCR1Q8TD31 782 aa17.19■□□□□ 0.34
PRKCSH-203ENST00000586486 TADA1Q96BN2 335 aa17.19■□□□□ 0.34
PRKCSH-203ENST00000586486 FCRL5Q96RD9 977 aa17.19■□□□□ 0.34
PRKCSH-203ENST00000586486 SEMA3CQ99985 751 aa17.19■□□□□ 0.34
PRKCSH-203ENST00000586486 CPEB1Q9BZB8 566 aaKnown RBP17.19■□□□□ 0.34
PRKCSH-203ENST00000586486 MTG2Q9H4K7 406 aa17.19■□□□□ 0.34
PRKCSH-203ENST00000586486 PRSS16Q9NQE7 514 aa17.19■□□□□ 0.34
PRKCSH-203ENST00000586486 HECAQ9UBI9 543 aaPredicted RBP17.19■□□□□ 0.34
PRKCSH-203ENST00000586486 RSPH14Q9UHP6 348 aa17.19■□□□□ 0.34
PRKCSH-203ENST00000586486 FARP1Q9Y4F1 1045 aaPredicted RBP17.19■□□□□ 0.34
PRKCSH-203ENST00000586486 ANKRD36A6QL64 1941 aa17.19■□□□□ 0.34
PRKCSH-203ENST00000586486 INSIG1O15503 277 aa17.18■□□□□ 0.34
PRKCSH-203ENST00000586486 SYNCRIPO60506 623 aaKnown RBP17.18■□□□□ 0.34
PRKCSH-203ENST00000586486 POP4O95707 220 aaKnown RBP17.18■□□□□ 0.34
PRKCSH-203ENST00000586486 PDGFBP01127 241 aaPredicted RBP17.18■□□□□ 0.34
PRKCSH-203ENST00000586486 KRT14P02533 472 aa17.18■□□□□ 0.34
PRKCSH-203ENST00000586486 ETS1P14921 441 aa17.18■□□□□ 0.34
PRKCSH-203ENST00000586486 AOC1P19801 751 aa17.18■□□□□ 0.34
PRKCSH-203ENST00000586486 RPL22P35268 128 aaKnown RBP17.18■□□□□ 0.34
PRKCSH-203ENST00000586486 SCNN1BP51168 640 aa17.18■□□□□ 0.34
PRKCSH-203ENST00000586486 DSC2Q02487 901 aa17.18■□□□□ 0.34
PRKCSH-203ENST00000586486 ITKQ08881 620 aa17.18■□□□□ 0.34
PRKCSH-203ENST00000586486 NIPAL4Q0D2K0 466 aa17.18■□□□□ 0.34
PRKCSH-203ENST00000586486 PTK6Q13882 451 aa17.18■□□□□ 0.34
PRKCSH-203ENST00000586486 GRM3Q14832 879 aa17.18■□□□□ 0.34
PRKCSH-203ENST00000586486 PARP6Q2NL67 630 aa17.18■□□□□ 0.34
PRKCSH-203ENST00000586486 MYLK3Q32MK0 819 aa17.18■□□□□ 0.34
PRKCSH-203ENST00000586486 FAM182AQ5T1J6 154 aa17.18■□□□□ 0.34
PRKCSH-203ENST00000586486 JAMLQ86YT9 394 aa17.18■□□□□ 0.34
PRKCSH-203ENST00000586486 KLHDC8BQ8IXV7 354 aa17.18■□□□□ 0.34
PRKCSH-203ENST00000586486 OR8D1Q8WZ84 308 aa17.18■□□□□ 0.34
PRKCSH-203ENST00000586486 VOPP1Q96AW1 172 aa17.18■□□□□ 0.34
PRKCSH-203ENST00000586486 LRIG1Q96JA1 1093 aa17.18■□□□□ 0.34
PRKCSH-203ENST00000586486 TUBGCP5Q96RT8 1024 aa17.18■□□□□ 0.34
PRKCSH-203ENST00000586486 NOD2Q9HC29 1040 aa17.18■□□□□ 0.34
PRKCSH-203ENST00000586486 SCUBE2Q9NQ36 999 aa17.18■□□□□ 0.34
PRKCSH-203ENST00000586486 DLGAP2Q9P1A6 1054 aa17.18■□□□□ 0.34
PRKCSH-203ENST00000586486 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.18■□□□□ 0.34
PRKCSH-203ENST00000586486 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.18■□□□□ 0.34
PRKCSH-203ENST00000586486 FAM187AA6NFU0 413 aa17.18■□□□□ 0.34
PRKCSH-203ENST00000586486 TTI1O43156 1089 aa17.18■□□□□ 0.34
PRKCSH-203ENST00000586486 MMP2P08253 660 aa17.18■□□□□ 0.34
PRKCSH-203ENST00000586486 ZSCAN5DPP0CG00 497 aa17.18■□□□□ 0.34
PRKCSH-203ENST00000586486 RAD51Q06609 339 aa17.18■□□□□ 0.34
PRKCSH-203ENST00000586486 PPP1R7Q15435 360 aa17.18■□□□□ 0.34
PRKCSH-203ENST00000586486 CRY1Q16526 586 aa17.18■□□□□ 0.34
PRKCSH-203ENST00000586486 NCEH1Q6PIU2 408 aa17.18■□□□□ 0.34
PRKCSH-203ENST00000586486 DSG4Q86SJ6 1040 aa17.18■□□□□ 0.34
PRKCSH-203ENST00000586486 SPEM1Q8N4L4 309 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms